BLASTX nr result
ID: Cnidium21_contig00035109
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00035109
(505 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002531885.1| protein translocase, putative [Ricinus commu... 103 5e-32
gb|AFL55358.1| chloroplast preprotein import receptor Toc159 [Bi... 102 4e-31
ref|XP_002874910.1| TOC159 [Arabidopsis lyrata subsp. lyrata] gi... 97 5e-31
ref|NP_567242.2| translocase of chloroplast 159 [Arabidopsis tha... 91 3e-29
gb|AAC78265.2| putative chloroplast outer envelope 86-like prote... 91 3e-29
>ref|XP_002531885.1| protein translocase, putative [Ricinus communis]
gi|223528493|gb|EEF30522.1| protein translocase,
putative [Ricinus communis]
Length = 1051
Score = 103 bits (258), Expect(2) = 5e-32
Identities = 48/87 (55%), Positives = 66/87 (75%)
Frame = +2
Query: 227 NHWSCRRNRKGEKIVPNGRSWRPALMILCHSMKLLSEANSLSKPQDSLKPRTIFGFLTGL 406
NH SCR+NR G+K++PNG++WRP L++LC+SMK+LSEA+SLSKPQD R +FGF +
Sbjct: 588 NHSSCRKNRDGQKVLPNGQTWRPQLLMLCYSMKILSEASSLSKPQDPFDHRKLFGFRSRS 647
Query: 407 RIIPCMLSSILQSLVRPKLAIEQGSGN 487
+P +LS +LQS PKL+ +QG N
Sbjct: 648 PPLPYLLSWLLQSRSHPKLSSDQGVDN 674
Score = 58.9 bits (141), Expect(2) = 5e-32
Identities = 31/60 (51%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
Frame = +3
Query: 3 PLLHTITKSLGFPIWRRTIVTLTHAASSLP--PESHPSEYDSFVIQWSLDLEENISQAAG 176
PLL +IT SLG IWR +VTLTHAAS+ P P P Y+ FV Q S ++++I QA G
Sbjct: 511 PLLRSITSSLGSSIWRNAVVTLTHAASAPPDGPSGSPLSYEVFVAQRSHVVQQSIGQAVG 570
>gb|AFL55358.1| chloroplast preprotein import receptor Toc159 [Bienertia
sinuspersici]
Length = 1395
Score = 102 bits (253), Expect(2) = 4e-31
Identities = 44/87 (50%), Positives = 65/87 (74%)
Frame = +2
Query: 227 NHWSCRRNRKGEKIVPNGRSWRPALMILCHSMKLLSEANSLSKPQDSLKPRTIFGFLTGL 406
NH +CR+NR+G+K++PNG++WRP L++LC+S+K+LSEA+S +KPQD R +FGF
Sbjct: 928 NHHACRKNREGQKVLPNGQAWRPQLLVLCYSVKILSEASSSAKPQDPFDSRKLFGFRVRS 987
Query: 407 RIIPCMLSSILQSLVRPKLAIEQGSGN 487
+P +LSS+LQ PKL+ +QG N
Sbjct: 988 PPLPYLLSSMLQPRAHPKLSADQGGDN 1014
Score = 57.8 bits (138), Expect(2) = 4e-31
Identities = 34/77 (44%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Frame = +3
Query: 3 PLLHTITKSLGFPIWRRTIVTLTHAASSLP--PESHPSEYDSFVIQWSLDLEENISQAAG 176
P+L TIT SLG IWR TI+TLTHA+ + P P P Y+ FV Q S +++I QA G
Sbjct: 851 PMLRTITSSLGSSIWRNTIITLTHASCAPPDGPSGTPLSYEVFVAQRSHIAQQSIGQAVG 910
Query: 177 YQPVMSRISNLPFCPVE 227
+M+ P VE
Sbjct: 911 DLRLMNLNMMSPVSLVE 927
>ref|XP_002874910.1| TOC159 [Arabidopsis lyrata subsp. lyrata] gi|297320747|gb|EFH51169.1|
TOC159 [Arabidopsis lyrata subsp. lyrata]
Length = 1515
Score = 97.1 bits (240), Expect(2) = 5e-31
Identities = 45/84 (53%), Positives = 62/84 (73%)
Frame = +2
Query: 227 NHWSCRRNRKGEKIVPNGRSWRPALMILCHSMKLLSEANSLSKPQDSLKPRTIFGFLTGL 406
NH CR+NR+G K++PNG++WRP L++LC+S+K+LSEANSL KPQ+ L R +FGF
Sbjct: 1048 NHPLCRKNREGVKVLPNGQTWRPQLLLLCYSLKVLSEANSLLKPQEPLDHRKVFGFRVRS 1107
Query: 407 RIIPCMLSSILQSLVRPKLAIEQG 478
+P +LS +LQS PKL +QG
Sbjct: 1108 PPLPYLLSWLLQSRAHPKLPGDQG 1131
Score = 62.4 bits (150), Expect(2) = 5e-31
Identities = 38/82 (46%), Positives = 46/82 (56%), Gaps = 10/82 (12%)
Frame = +3
Query: 3 PLLHTITKSLGFPIWRRTIVTLTHAASSLP--PESHPSEYDSFVIQWSLDLEENISQAAG 176
PLL TIT SLG IW+ IVTLTHAAS+ P P P YD FV Q S ++++I QA G
Sbjct: 971 PLLRTITASLGTSIWKNAIVTLTHAASAPPDGPSGTPLSYDVFVAQCSHIVQQSIGQAVG 1030
Query: 177 YQPVM--------SRISNLPFC 218
+M S + N P C
Sbjct: 1031 DLRLMNPSLMNPVSLVENHPLC 1052
>ref|NP_567242.2| translocase of chloroplast 159 [Arabidopsis thaliana]
gi|75100143|sp|O81283.1|TC159_ARATH RecName:
Full=Translocase of chloroplast 159, chloroplastic;
Short=AtToc159; AltName: Full=159 kDa chloroplast outer
envelope protein; AltName: Full=Plastid protein import 2;
AltName: Full=Translocase of chloroplast 160,
chloroplastic; Short=AtToc160; AltName: Full=Translocase
of chloroplast 86, chloroplastic; Short=AtToc86
gi|3193301|gb|AAC19285.1| T14P8.24 [Arabidopsis thaliana]
gi|332656782|gb|AEE82182.1| translocase of chloroplast
159 [Arabidopsis thaliana]
Length = 1503
Score = 91.3 bits (225), Expect(2) = 3e-29
Identities = 42/84 (50%), Positives = 60/84 (71%)
Frame = +2
Query: 227 NHWSCRRNRKGEKIVPNGRSWRPALMILCHSMKLLSEANSLSKPQDSLKPRTIFGFLTGL 406
NH CR+NR+G K++PNG++WR L++LC+S+K+LSE NSL +PQ+ L R +FGF
Sbjct: 1036 NHPLCRKNREGVKVLPNGQTWRSQLLLLCYSLKVLSETNSLLRPQEPLDHRKVFGFRVRS 1095
Query: 407 RIIPCMLSSILQSLVRPKLAIEQG 478
+P +LS +LQS PKL +QG
Sbjct: 1096 PPLPYLLSWLLQSRAHPKLPGDQG 1119
Score = 62.4 bits (150), Expect(2) = 3e-29
Identities = 38/82 (46%), Positives = 46/82 (56%), Gaps = 10/82 (12%)
Frame = +3
Query: 3 PLLHTITKSLGFPIWRRTIVTLTHAASSLP--PESHPSEYDSFVIQWSLDLEENISQAAG 176
PLL TIT SLG IW+ IVTLTHAAS+ P P P YD FV Q S ++++I QA G
Sbjct: 959 PLLRTITASLGTSIWKNAIVTLTHAASAPPDGPSGTPLSYDVFVAQCSHIVQQSIGQAVG 1018
Query: 177 YQPVM--------SRISNLPFC 218
+M S + N P C
Sbjct: 1019 DLRLMNPSLMNPVSLVENHPLC 1040
>gb|AAC78265.2| putative chloroplast outer envelope 86-like protein [Arabidopsis
thaliana] gi|7269011|emb|CAB80744.1| putative
chloroplast outer envelope 86-like protein [Arabidopsis
thaliana]
Length = 865
Score = 91.3 bits (225), Expect(2) = 3e-29
Identities = 42/84 (50%), Positives = 60/84 (71%)
Frame = +2
Query: 227 NHWSCRRNRKGEKIVPNGRSWRPALMILCHSMKLLSEANSLSKPQDSLKPRTIFGFLTGL 406
NH CR+NR+G K++PNG++WR L++LC+S+K+LSE NSL +PQ+ L R +FGF
Sbjct: 398 NHPLCRKNREGVKVLPNGQTWRSQLLLLCYSLKVLSETNSLLRPQEPLDHRKVFGFRVRS 457
Query: 407 RIIPCMLSSILQSLVRPKLAIEQG 478
+P +LS +LQS PKL +QG
Sbjct: 458 PPLPYLLSWLLQSRAHPKLPGDQG 481
Score = 62.4 bits (150), Expect(2) = 3e-29
Identities = 38/82 (46%), Positives = 46/82 (56%), Gaps = 10/82 (12%)
Frame = +3
Query: 3 PLLHTITKSLGFPIWRRTIVTLTHAASSLP--PESHPSEYDSFVIQWSLDLEENISQAAG 176
PLL TIT SLG IW+ IVTLTHAAS+ P P P YD FV Q S ++++I QA G
Sbjct: 321 PLLRTITASLGTSIWKNAIVTLTHAASAPPDGPSGTPLSYDVFVAQCSHIVQQSIGQAVG 380
Query: 177 YQPVM--------SRISNLPFC 218
+M S + N P C
Sbjct: 381 DLRLMNPSLMNPVSLVENHPLC 402