BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00035089
         (913 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271674.2| PREDICTED: DNA gyrase subunit A, chloroplast...   342   5e-92
emb|CBI29133.3| unnamed protein product [Vitis vinifera]              342   5e-92
ref|XP_002526324.1| DNA gyrase subunit A, chloroplast/mitochondr...   329   6e-88
ref|XP_004146774.1| PREDICTED: DNA gyrase subunit A, chloroplast...   326   4e-87
ref|XP_003533113.1| PREDICTED: LOW QUALITY PROTEIN: DNA gyrase s...   320   4e-85

>ref|XP_002271674.2| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like
            [Vitis vinifera]
          Length = 925

 Score =  342 bits (878), Expect = 5e-92
 Identities = 180/226 (79%), Positives = 201/226 (88%), Gaps = 1/226 (0%)
 Frame = +3

Query: 3    YIKKVSLSYFSSIRSTGIIAIQLVPGDELKWVRLCTNEDLVAMASQNGMVILGSCEIMRA 182
            YIKKVSL++FSSIRSTGIIAIQLVPGDELKWVR CTN+DLVAMASQNGMVIL SCEI+RA
Sbjct: 695  YIKKVSLNFFSSIRSTGIIAIQLVPGDELKWVRCCTNDDLVAMASQNGMVILSSCEIIRA 754

Query: 183  LSRNTRGQVAMRLKKGDKMASMDIIPAAMRKDLESKTEALLSDGKRASGPMLLFISESGI 362
            L RNTRG +AMRLK+GDKMASMDIIPAA+RKDLE   E   S  +  +GP LLF+SESG+
Sbjct: 755  LGRNTRGSIAMRLKQGDKMASMDIIPAAIRKDLEKALEDRQSRARNLNGPWLLFVSESGL 814

Query: 363  GKRVPLSSFRLSSLNRVGLIGFKFSSEDRLAAVFVVGSSMTEDGESDEQVVLVSQAGTVN 542
            GKRVPLS FRLS LNRVGLIG+KFS+ED LAAVFVVG S+TEDGESDEQVVLVSQ+GT+N
Sbjct: 815  GKRVPLSRFRLSPLNRVGLIGYKFSAEDHLAAVFVVGFSLTEDGESDEQVVLVSQSGTIN 874

Query: 543  RIKVKDISIQSRYARGVILMRLEHAGKIQSASLISA-EPGPEDSDA 677
            RIKV DISIQSR+ARGVILMRLE+AGKIQSASL+SA E   +D +A
Sbjct: 875  RIKVWDISIQSRFARGVILMRLEYAGKIQSASLMSATETETDDEEA 920


>emb|CBI29133.3| unnamed protein product [Vitis vinifera]
          Length = 823

 Score =  342 bits (878), Expect = 5e-92
 Identities = 180/226 (79%), Positives = 201/226 (88%), Gaps = 1/226 (0%)
 Frame = +3

Query: 3    YIKKVSLSYFSSIRSTGIIAIQLVPGDELKWVRLCTNEDLVAMASQNGMVILGSCEIMRA 182
            YIKKVSL++FSSIRSTGIIAIQLVPGDELKWVR CTN+DLVAMASQNGMVIL SCEI+RA
Sbjct: 593  YIKKVSLNFFSSIRSTGIIAIQLVPGDELKWVRCCTNDDLVAMASQNGMVILSSCEIIRA 652

Query: 183  LSRNTRGQVAMRLKKGDKMASMDIIPAAMRKDLESKTEALLSDGKRASGPMLLFISESGI 362
            L RNTRG +AMRLK+GDKMASMDIIPAA+RKDLE   E   S  +  +GP LLF+SESG+
Sbjct: 653  LGRNTRGSIAMRLKQGDKMASMDIIPAAIRKDLEKALEDRQSRARNLNGPWLLFVSESGL 712

Query: 363  GKRVPLSSFRLSSLNRVGLIGFKFSSEDRLAAVFVVGSSMTEDGESDEQVVLVSQAGTVN 542
            GKRVPLS FRLS LNRVGLIG+KFS+ED LAAVFVVG S+TEDGESDEQVVLVSQ+GT+N
Sbjct: 713  GKRVPLSRFRLSPLNRVGLIGYKFSAEDHLAAVFVVGFSLTEDGESDEQVVLVSQSGTIN 772

Query: 543  RIKVKDISIQSRYARGVILMRLEHAGKIQSASLISA-EPGPEDSDA 677
            RIKV DISIQSR+ARGVILMRLE+AGKIQSASL+SA E   +D +A
Sbjct: 773  RIKVWDISIQSRFARGVILMRLEYAGKIQSASLMSATETETDDEEA 818


>ref|XP_002526324.1| DNA gyrase subunit A, chloroplast/mitochondrial precursor, putative
           [Ricinus communis] gi|223534351|gb|EEF36060.1| DNA
           gyrase subunit A, chloroplast/mitochondrial precursor,
           putative [Ricinus communis]
          Length = 433

 Score =  329 bits (843), Expect = 6e-88
 Identities = 181/230 (78%), Positives = 196/230 (85%), Gaps = 3/230 (1%)
 Frame = +3

Query: 3   YIKKVSLSYFSSIRSTGIIAIQLVPGDELKWVRLCTNEDLVAMASQNGMVILGSCEIMRA 182
           YIKKV L+ FS+IRSTGIIAIQLVPGDELKWVR CTN DLVAMAS NGMVIL SCE +RA
Sbjct: 189 YIKKVPLNLFSAIRSTGIIAIQLVPGDELKWVRCCTNNDLVAMASLNGMVILSSCENIRA 248

Query: 183 LSRNTRGQVAMRLKKGDKMASMDIIPAAMRKDLESKTEALLSDGKRASGPMLLFISESGI 362
           LSRNTRG VAMRLK GDKMASMDIIP AMRKDLE   E   S+ K  SGP LLF+SE+G 
Sbjct: 249 LSRNTRGGVAMRLKGGDKMASMDIIPVAMRKDLERVLEDPRSNSK-GSGPWLLFVSENGY 307

Query: 363 GKRVPLSSFRLSSLNRVGLIGFKFSSEDRLAAVFVVGSSMTEDGESDEQVVLVSQAGTVN 542
           GKRVPLSSFRLS LNRVGLIG+KFS+ED+LAAVFVVG ++ EDGESDEQVVLVSQ+GTVN
Sbjct: 308 GKRVPLSSFRLSPLNRVGLIGYKFSAEDQLAAVFVVGFTLAEDGESDEQVVLVSQSGTVN 367

Query: 543 RIKVKDISIQSRYARGVILMRLEHAGKIQSASLIS---AEPGPEDSDAEE 683
           RIKV+DISIQSR+ARGVILMRLE AGKIQSASLIS   AEP     +A E
Sbjct: 368 RIKVQDISIQSRFARGVILMRLEQAGKIQSASLISTMEAEPKESTPNASE 417


>ref|XP_004146774.1| PREDICTED: DNA gyrase subunit A, chloroplastic/mitochondrial-like
            [Cucumis sativus]
          Length = 923

 Score =  326 bits (836), Expect = 4e-87
 Identities = 174/226 (76%), Positives = 196/226 (86%), Gaps = 1/226 (0%)
 Frame = +3

Query: 3    YIKKVSLSYFSSIRSTGIIAIQLVPGDELKWVRLCTNEDLVAMASQNGMVILGSCEIMRA 182
            YIKKVSL++FSSIRSTGIIAIQLV GDELKWVR CTN++LVAMASQNGMVIL SC+ +RA
Sbjct: 704  YIKKVSLNFFSSIRSTGIIAIQLVSGDELKWVRRCTNDNLVAMASQNGMVILSSCDTIRA 763

Query: 183  LSRNTRGQVAMRLKKGDKMASMDIIPAAMRKDLESKTEALLSDGKRASGPMLLFISESGI 362
            L RNTRG VAM+LK GDKMASMDIIPAA+  DLE  +       K ++GP LLF+SESG+
Sbjct: 764  LGRNTRGSVAMKLKTGDKMASMDIIPAAVWNDLERNSS------KSSNGPWLLFVSESGV 817

Query: 363  GKRVPLSSFRLSSLNRVGLIGFKFSSEDRLAAVFVVGSSMTEDGESDEQVVLVSQAGTVN 542
            GKRVPL SFRLS L RVGLIG KFSS+DRLAAVFVVG S+ EDGESDEQVVLVSQ+GTVN
Sbjct: 818  GKRVPLKSFRLSPLRRVGLIGCKFSSQDRLAAVFVVGFSLAEDGESDEQVVLVSQSGTVN 877

Query: 543  RIKVKDISIQSRYARGVILMRLEHAGKIQSASLIS-AEPGPEDSDA 677
            RIKV+D+SIQSR+ARGVILMRL+HAGKIQSASLIS AE  PE+ +A
Sbjct: 878  RIKVRDVSIQSRFARGVILMRLDHAGKIQSASLISAAETEPEEEEA 923


>ref|XP_003533113.1| PREDICTED: LOW QUALITY PROTEIN: DNA gyrase subunit A,
            chloroplastic/mitochondrial-like [Glycine max]
          Length = 924

 Score =  320 bits (819), Expect = 4e-85
 Identities = 170/233 (72%), Positives = 198/233 (84%)
 Frame = +3

Query: 3    YIKKVSLSYFSSIRSTGIIAIQLVPGDELKWVRLCTNEDLVAMASQNGMVILGSCEIMRA 182
            YIK+VSL+ FSSIRS GIIAIQLVPGDELKWVRLC+N+D VAMAS NGMV+L  C  +R 
Sbjct: 695  YIKRVSLNLFSSIRSIGIIAIQLVPGDELKWVRLCSNDDFVAMASHNGMVMLSQCSKIRT 754

Query: 183  LSRNTRGQVAMRLKKGDKMASMDIIPAAMRKDLESKTEALLSDGKRASGPMLLFISESGI 362
            LSRNTRG  AMRLKKGDKMAS+DIIPAAM  +LE+ ++    + K  +GP LLF+SE+G 
Sbjct: 755  LSRNTRGAPAMRLKKGDKMASVDIIPAAMWNNLETTSKFPGINAKSQNGPWLLFVSENGY 814

Query: 363  GKRVPLSSFRLSSLNRVGLIGFKFSSEDRLAAVFVVGSSMTEDGESDEQVVLVSQAGTVN 542
            GKRVPLSSFR+SSLNRVGLIG+KFS+EDRLAAVFVVG S  EDGESDEQVVLVSQ+GTVN
Sbjct: 815  GKRVPLSSFRISSLNRVGLIGYKFSAEDRLAAVFVVGFSSAEDGESDEQVVLVSQSGTVN 874

Query: 543  RIKVKDISIQSRYARGVILMRLEHAGKIQSASLISAEPGPEDSDAEEFDVVSL 701
            RIKV+DISIQSR+ARGVILMRL+H+GKIQSASLISA      +D E  +V+++
Sbjct: 875  RIKVRDISIQSRFARGVILMRLDHSGKIQSASLISA------TDCEPEEVLAI 921