BLASTX nr result

ID: Cnidium21_contig00035044 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00035044
         (481 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511636.1| LIGULELESS1 protein, putative [Ricinus commu...   211   4e-53
gb|AFC17960.1| squamosa promoter binding protein-like 8 [Betula ...   210   8e-53
emb|CBI16614.3| unnamed protein product [Vitis vinifera]              206   1e-51
ref|XP_002277183.1| PREDICTED: squamosa promoter-binding-like pr...   206   1e-51
gb|AEB71564.1| squamosa promoter binding protein-like protein [S...   203   1e-50

>ref|XP_002511636.1| LIGULELESS1 protein, putative [Ricinus communis]
           gi|223548816|gb|EEF50305.1| LIGULELESS1 protein,
           putative [Ricinus communis]
          Length = 302

 Score =  211 bits (538), Expect = 4e-53
 Identities = 104/138 (75%), Positives = 113/138 (81%), Gaps = 1/138 (0%)
 Frame = -3

Query: 431 GSVSAPRCQAEGCNADLTHAKHYHRRHKVCEFHSKAATVIAAGLTQRFCQQCSRFHLLTE 252
           GS +APRCQAEGCNADLTHAKHYHRRHKVCEFHSKA+TVIAAGLTQRFCQQCSRFHLL+E
Sbjct: 144 GSSNAPRCQAEGCNADLTHAKHYHRRHKVCEFHSKASTVIAAGLTQRFCQQCSRFHLLSE 203

Query: 251 FDNGKRSCRKRLADHNRRRRKTHQTNQDKSKSQLENTQNSSSENLTRXXXXXXXXXXXSA 72
           FDNGKRSCRKRLADHNRRRRK+HQ N D +KS  E   NSSSENL R           S+
Sbjct: 204 FDNGKRSCRKRLADHNRRRRKSHQINHDANKSHPETATNSSSENLPRSPQDSGTHNSSSS 263

Query: 71  -TMPISPPRISLDSFRQR 21
            T+ +SPPR+ LD FRQR
Sbjct: 264 VTVAVSPPRMFLDCFRQR 281


>gb|AFC17960.1| squamosa promoter binding protein-like 8 [Betula platyphylla]
          Length = 309

 Score =  210 bits (535), Expect = 8e-53
 Identities = 104/143 (72%), Positives = 117/143 (81%)
 Frame = -3

Query: 431 GSVSAPRCQAEGCNADLTHAKHYHRRHKVCEFHSKAATVIAAGLTQRFCQQCSRFHLLTE 252
           GS ++PRCQAEGCNADLTHAKHYHRRHKVCEFHSKA+TVIAAGLTQRFCQQCSRFHLL+E
Sbjct: 157 GSANSPRCQAEGCNADLTHAKHYHRRHKVCEFHSKASTVIAAGLTQRFCQQCSRFHLLSE 216

Query: 251 FDNGKRSCRKRLADHNRRRRKTHQTNQDKSKSQLENTQNSSSENLTRXXXXXXXXXXXSA 72
           FDNGKRSCRKRLADHNRRRRKTHQ N ++ KSQ +N +N SSE   R           S 
Sbjct: 217 FDNGKRSCRKRLADHNRRRRKTHQPNPEQLKSQPDNARNPSSE---RSPPDSGAHSTSSV 273

Query: 71  TMPISPPRISLDSFRQRLNYQGS 3
           T+ +SPPR+SLD FRQR  +QG+
Sbjct: 274 TVAVSPPRMSLDCFRQR-PFQGT 295


>emb|CBI16614.3| unnamed protein product [Vitis vinifera]
          Length = 388

 Score =  206 bits (525), Expect = 1e-51
 Identities = 100/140 (71%), Positives = 112/140 (80%), Gaps = 3/140 (2%)
 Frame = -3

Query: 431 GSVSAPRCQAEGCNADLTHAKHYHRRHKVCEFHSKAATVIAAGLTQRFCQQCSRFHLLTE 252
           G  ++PRCQAEGCNADLTHAKHYHRRHKVCEFHSKA+TV AAGLTQRFCQQCSRFHLL+E
Sbjct: 230 GLTNSPRCQAEGCNADLTHAKHYHRRHKVCEFHSKASTVFAAGLTQRFCQQCSRFHLLSE 289

Query: 251 FDNGKRSCRKRLADHNRRRRKTHQTNQDKSK---SQLENTQNSSSENLTRXXXXXXXXXX 81
           FDNGKRSCRKRLADHNRRRRK+ Q  QD  K     LEN +NSSS+N+TR          
Sbjct: 290 FDNGKRSCRKRLADHNRRRRKSQQPIQDNHKLHQHHLENARNSSSDNITRSPPDSGAHSS 349

Query: 80  XSATMPISPPRISLDSFRQR 21
            S T+ +SPPR++LD FRQR
Sbjct: 350 SSVTVAVSPPRMTLDCFRQR 369


>ref|XP_002277183.1| PREDICTED: squamosa promoter-binding-like protein 8 isoform 1
           [Vitis vinifera] gi|359489306|ref|XP_003633906.1|
           PREDICTED: squamosa promoter-binding-like protein 8
           isoform 2 [Vitis vinifera]
          Length = 304

 Score =  206 bits (525), Expect = 1e-51
 Identities = 100/140 (71%), Positives = 112/140 (80%), Gaps = 3/140 (2%)
 Frame = -3

Query: 431 GSVSAPRCQAEGCNADLTHAKHYHRRHKVCEFHSKAATVIAAGLTQRFCQQCSRFHLLTE 252
           G  ++PRCQAEGCNADLTHAKHYHRRHKVCEFHSKA+TV AAGLTQRFCQQCSRFHLL+E
Sbjct: 146 GLTNSPRCQAEGCNADLTHAKHYHRRHKVCEFHSKASTVFAAGLTQRFCQQCSRFHLLSE 205

Query: 251 FDNGKRSCRKRLADHNRRRRKTHQTNQDKSK---SQLENTQNSSSENLTRXXXXXXXXXX 81
           FDNGKRSCRKRLADHNRRRRK+ Q  QD  K     LEN +NSSS+N+TR          
Sbjct: 206 FDNGKRSCRKRLADHNRRRRKSQQPIQDNHKLHQHHLENARNSSSDNITRSPPDSGAHSS 265

Query: 80  XSATMPISPPRISLDSFRQR 21
            S T+ +SPPR++LD FRQR
Sbjct: 266 SSVTVAVSPPRMTLDCFRQR 285


>gb|AEB71564.1| squamosa promoter binding protein-like protein [Solanum chacoense]
          Length = 293

 Score =  203 bits (516), Expect = 1e-50
 Identities = 101/136 (74%), Positives = 112/136 (82%), Gaps = 1/136 (0%)
 Frame = -3

Query: 425 VSAPRCQAEGCNADLTHAKHYHRRHKVCEFHSKAATVIAAGLTQRFCQQCSRFHLLTEFD 246
           ++ PRCQAEGCNADLTHAKHYHRRHKVCEFHSKA+TVIAAGLTQRFCQQCSRFHLL+EFD
Sbjct: 158 MNTPRCQAEGCNADLTHAKHYHRRHKVCEFHSKASTVIAAGLTQRFCQQCSRFHLLSEFD 217

Query: 245 NGKRSCRKRLADHNRRRRKTHQTN-QDKSKSQLENTQNSSSENLTRXXXXXXXXXXXSAT 69
           NGKRSCRKRLADHNRRRRK  Q N ++ +KSQL++T+NS S  L R           S T
Sbjct: 218 NGKRSCRKRLADHNRRRRKNQQANLENSNKSQLDSTRNSPSHTLAR-SPADSGAHCSSVT 276

Query: 68  MPISPPRISLDSFRQR 21
           + ISPPRISLD FRQR
Sbjct: 277 VAISPPRISLDVFRQR 292


Top