BLASTX nr result

ID: Cnidium21_contig00035043 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00035043
         (543 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16614.3| unnamed protein product [Vitis vinifera]              137   1e-30
ref|XP_002277183.1| PREDICTED: squamosa promoter-binding-like pr...   135   4e-30
ref|XP_002511636.1| LIGULELESS1 protein, putative [Ricinus commu...   125   3e-27
ref|XP_003521087.1| PREDICTED: squamosa promoter-binding-like pr...   121   8e-26
emb|CAB56568.1| squamosa promoter binding protein-homologue 3 [A...   120   1e-25

>emb|CBI16614.3| unnamed protein product [Vitis vinifera]
          Length = 388

 Score =  137 bits (344), Expect = 1e-30
 Identities = 82/162 (50%), Positives = 103/162 (63%), Gaps = 8/162 (4%)
 Frame = +3

Query: 78  NTSLPLSSCQMLDYEWGNPSNLMVTGDDPPAQDSGQNAQLYNHYSHQTFNQTLINPNHTH 257
           N   P    +MLDYEWGNPS +M++GD+PP QDS Q  Q+++HY HQTF   L+ P    
Sbjct: 75  NVVKPELQWEMLDYEWGNPSPIMLSGDEPP-QDSDQTRQIFDHY-HQTFTDGLVAP---- 128

Query: 258 HQNAYATPTHHSNIQNNHFQTFYDPNSYPGSYPNPDPRMISFDPVHDPA-----GFMIVP 422
              A A   H S  Q  H  + YDP +Y  +Y  P P M+S +PV   +     GFM+VP
Sbjct: 129 ---ATAFFHHQSQPQPAHIHSLYDPRAY-HTYQAPPPAMLSLEPVAGTSAGGGTGFMVVP 184

Query: 423 KTEP--AGSEYTSRIGLNLGGRTYFSSSEDDFVNRLY-RRSR 539
           K+E     +++T+RIGLNLGGRTYF SSEDDFVNRLY RRSR
Sbjct: 185 KSEEMVPAADFTARIGLNLGGRTYF-SSEDDFVNRLYQRRSR 225


>ref|XP_002277183.1| PREDICTED: squamosa promoter-binding-like protein 8 isoform 1
           [Vitis vinifera] gi|359489306|ref|XP_003633906.1|
           PREDICTED: squamosa promoter-binding-like protein 8
           isoform 2 [Vitis vinifera]
          Length = 304

 Score =  135 bits (340), Expect = 4e-30
 Identities = 80/152 (52%), Positives = 100/152 (65%), Gaps = 8/152 (5%)
 Frame = +3

Query: 108 MLDYEWGNPSNLMVTGDDPPAQDSGQNAQLYNHYSHQTFNQTLINPNHTHHQNAYATPTH 287
           MLDYEWGNPS +M++GD+PP QDS Q  Q+++HY HQTF   L+ P       A A   H
Sbjct: 1   MLDYEWGNPSPIMLSGDEPP-QDSDQTRQIFDHY-HQTFTDGLVAP-------ATAFFHH 51

Query: 288 HSNIQNNHFQTFYDPNSYPGSYPNPDPRMISFDPVHDPA-----GFMIVPKTEPA--GSE 446
            S  Q  H  + YDP +Y  +Y  P P M+S +PV   +     GFM+VPK+E     ++
Sbjct: 52  QSQPQPAHIHSLYDPRAYH-TYQAPPPAMLSLEPVAGTSAGGGTGFMVVPKSEEMVPAAD 110

Query: 447 YTSRIGLNLGGRTYFSSSEDDFVNRLY-RRSR 539
           +T+RIGLNLGGRTYF SSEDDFVNRLY RRSR
Sbjct: 111 FTARIGLNLGGRTYF-SSEDDFVNRLYQRRSR 141


>ref|XP_002511636.1| LIGULELESS1 protein, putative [Ricinus communis]
           gi|223548816|gb|EEF50305.1| LIGULELESS1 protein,
           putative [Ricinus communis]
          Length = 302

 Score =  125 bits (315), Expect = 3e-27
 Identities = 72/151 (47%), Positives = 95/151 (62%), Gaps = 7/151 (4%)
 Frame = +3

Query: 108 MLDYEWGNPSNLMVTGDDPPAQDSGQNAQLYNHYSHQTFNQTLINPNHTHHQNAYATPTH 287
           ML+YEWGNPS +M+TG++  +QD  QN Q+++HY+ Q+FN  L+           A+  H
Sbjct: 1   MLEYEWGNPSTIMLTGEEQ-SQDPDQNRQIFDHYTAQSFNDNLL-------AQPAASLFH 52

Query: 288 HSNIQNNHFQTFYDPNSYPGSYPNPD-PRMISFDPVHDPAG----FMIVPKTEPAG--SE 446
           H N   +   + YDP +   SY  P  P ++S DP+         + +VPKTE      +
Sbjct: 53  HPN--PHQVNSLYDPRA--SSYTAPHHPSLLSLDPIPTHTAPCPSYFLVPKTEQVTRPQD 108

Query: 447 YTSRIGLNLGGRTYFSSSEDDFVNRLYRRSR 539
           YTSRIGLNLGGRTYFSS+EDDFVNRLYRRSR
Sbjct: 109 YTSRIGLNLGGRTYFSSAEDDFVNRLYRRSR 139


>ref|XP_003521087.1| PREDICTED: squamosa promoter-binding-like protein 8-like [Glycine
           max]
          Length = 336

 Score =  121 bits (303), Expect = 8e-26
 Identities = 77/183 (42%), Positives = 102/183 (55%), Gaps = 39/183 (21%)
 Frame = +3

Query: 108 MLDYEWGNPSNLMVTG-DDPPAQDSGQ-NAQLYNHYSHQTF--NQTLINPNH-------- 251
           MLDYEWGNPS +M++G +D  A  S Q + Q+++HY+  T   +  L  P H        
Sbjct: 1   MLDYEWGNPSTIMLSGNEDSSAAGSDQTHRQIFDHYASHTLIPDHFLHAPTHSTATTAAA 60

Query: 252 -----THHQNAYATPTHHS--NIQNNHFQTFYDPNSYPG----SYPNPDPRMISFDPV-- 392
                THH +    P HH+  ++ ++H   F+DP ++ G    SYP P   M+S DP+  
Sbjct: 61  ATVDFTHHHHFTPQPHHHNQNHMNHHHHHAFFDPRAFHGASNTSYPPPHS-MLSLDPLPH 119

Query: 393 -----------HDPAGFMIVPKTEPAGSEYT---SRIGLNLGGRTYFSSSEDDFVNRLYR 530
                        P G ++VPK+E  G       SRIGLNLGGRTYFSSSEDDFV+RLYR
Sbjct: 120 VNAVGPGHGPGSGPGGLLLVPKSEDVGRPMDFVGSRIGLNLGGRTYFSSSEDDFVSRLYR 179

Query: 531 RSR 539
           RSR
Sbjct: 180 RSR 182


>emb|CAB56568.1| squamosa promoter binding protein-homologue 3 [Antirrhinum majus]
          Length = 305

 Score =  120 bits (302), Expect = 1e-25
 Identities = 74/150 (49%), Positives = 91/150 (60%), Gaps = 6/150 (4%)
 Frame = +3

Query: 108 MLDYEWGNPSNLMVTGDDPPAQDSGQNAQLYNHYSHQT-FNQT--LINPNHTHHQNAYAT 278
           ML+Y+WGNPS+++++G++ P          ++ YS  T F+QT   IN   TH     A 
Sbjct: 1   MLEYDWGNPSSIILSGEEIPPDPEQTRQDNFDPYSANTNFSQTPHFINNPQTHFT---AP 57

Query: 279 PTHHSNIQNNHFQTFYDPNSYPGSYPNPDPRMISFDPVHDPAGFMIVPKTEPA---GSEY 449
            THH   Q      FYDP + PGS    +P         DP GFM +PKTEPA   G E+
Sbjct: 58  NTHHQ--QYPFHPNFYDPYN-PGSTLGLEPA--------DPTGFMTIPKTEPAVGGGFEF 106

Query: 450 TSRIGLNLGGRTYFSSSEDDFVNRLYRRSR 539
            SRIGLNLGGRTYF+SSEDDFVNRLYRRSR
Sbjct: 107 NSRIGLNLGGRTYFASSEDDFVNRLYRRSR 136


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