BLASTX nr result

ID: Cnidium21_contig00035041 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00035041
         (411 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004147500.1| PREDICTED: F-box protein CPR30-like [Cucumis...    65   4e-09
ref|XP_004169061.1| PREDICTED: putative F-box protein At3g21120-...    63   2e-08
ref|XP_004159647.1| PREDICTED: F-box protein CPR30-like [Cucumis...    62   5e-08
ref|XP_004151361.1| PREDICTED: F-box protein CPR30-like [Cucumis...    59   3e-07
emb|CAN70931.1| hypothetical protein VITISV_034638 [Vitis vinifera]    58   9e-07

>ref|XP_004147500.1| PREDICTED: F-box protein CPR30-like [Cucumis sativus]
          Length = 365

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 45/144 (31%), Positives = 68/144 (47%), Gaps = 15/144 (10%)
 Frame = +2

Query: 2   ANGIVCVGVEFACSDKQRKTDIYLWNPAIRQSKR-----ILSSFNKCNNFTHVETLGFGY 166
           ++G++C+ V        R  DI+LWNP  R+ ++     IL   +  ++FT    +GFGY
Sbjct: 106 SHGLICLTV--------RHWDIFLWNPLTREFRKLPPSIILHPSDMYSSFTRA--VGFGY 155

Query: 167 DGVDHDFKVFRVVG---SPFSYAIDATEVYSANKNAWRNVPEPLDNPIRW--TFEVCING 331
           D    DFKV R +G    P  Y     E+Y  +K+ WR +  P      W   F +C  G
Sbjct: 156 DSKSMDFKVVRFMGFTEEPELYYCSRVEIYELSKDRWREIESPFLGHRFWKPCFNMCHEG 215

Query: 332 FL--CGIGVSG---MMAFDLNQEV 388
               CG+   G   +  FD++ EV
Sbjct: 216 MCSWCGLSEEGTEILETFDISDEV 239


>ref|XP_004169061.1| PREDICTED: putative F-box protein At3g21120-like [Cucumis sativus]
          Length = 341

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 43/143 (30%), Positives = 70/143 (48%), Gaps = 14/143 (9%)
 Frame = +2

Query: 2   ANGIVCVGVEFACSDKQRKTDIYLWNPAIRQSKRILSSF-----NKCNNFTHVETLGFGY 166
           ++G++C+ V        R  DIYLWNP  R+ +++  S      ++ N+F  ++ +GFGY
Sbjct: 106 SHGLICLIV--------RHWDIYLWNPLTREFRKLPPSVIVHPRDRYNSF--IKAVGFGY 155

Query: 167 DGVDHDFKVFRVVG--SPFSYAIDATEVYSANKNAWRNVPEPLDNPIRW--TFEVCING- 331
           D    DFKV R +G   P  Y     E+Y  +K+ WR +  P      W   F +C  G 
Sbjct: 156 DSKSMDFKVVRYMGLEEPGFYYTSKVEIYDLSKDKWREIESPFLTHRFWKPCFNMCHEGT 215

Query: 332 -FLCGI---GVSGMMAFDLNQEV 388
            +  G+   G+  +  F ++ EV
Sbjct: 216 CYWWGLNEEGIKTLETFHMSDEV 238


>ref|XP_004159647.1| PREDICTED: F-box protein CPR30-like [Cucumis sativus]
          Length = 365

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 44/144 (30%), Positives = 67/144 (46%), Gaps = 15/144 (10%)
 Frame = +2

Query: 2   ANGIVCVGVEFACSDKQRKTDIYLWNPAIRQSKR-----ILSSFNKCNNFTHVETLGFGY 166
           ++G++C+ V        R  DI+LWNP  R+ ++     IL   +  ++FT    +GFGY
Sbjct: 106 SHGLICLTV--------RHWDIFLWNPLTREFRKLPPSIILHPSDMYSSFTRA--VGFGY 155

Query: 167 DGVDHDFKVFRVVG---SPFSYAIDATEVYSANKNAWRNVPEPLDNPIRW--TFEVCING 331
           D    DFKV R +G    P        E+Y  +K+ WR +  P      W   F +C  G
Sbjct: 156 DSKSMDFKVVRFMGFTEEPELCYCSRVEIYELSKDRWREIESPFLGHRFWKPCFNMCHEG 215

Query: 332 FL--CGIGVSG---MMAFDLNQEV 388
               CG+   G   +  FD++ EV
Sbjct: 216 MCSWCGLSEEGTEILETFDMSDEV 239


>ref|XP_004151361.1| PREDICTED: F-box protein CPR30-like [Cucumis sativus]
          Length = 366

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 44/144 (30%), Positives = 65/144 (45%), Gaps = 15/144 (10%)
 Frame = +2

Query: 2   ANGIVCVGVEFACSDKQRKTDIYLWNPAIRQSKR-----ILSSFNKCNNFTHVETLGFGY 166
           ++G++C+ V   C       DIYLWNP   + ++     IL   +  ++FT    +GFGY
Sbjct: 106 SHGLICLSV---CH-----WDIYLWNPLTTEFRKLPPSIILHPRDSYSSFTRA--IGFGY 155

Query: 167 DGVDHDFKVFRVVG---SPFSYAIDATEVYSANKNAWRNVPEPLDNPIRW--TFEVCING 331
           D    DFKV R +G    P  Y     E+Y   K+ WR +  P      W   F +C  G
Sbjct: 156 DSKSMDFKVVRFMGFAKEPEFYYRTRVEIYDLTKDRWREIESPFLGHRFWKPCFNMCHEG 215

Query: 332 F-----LCGIGVSGMMAFDLNQEV 388
                 L   G+  +  FD++ EV
Sbjct: 216 TCYWWGLSEEGIETLETFDMSDEV 239


>emb|CAN70931.1| hypothetical protein VITISV_034638 [Vitis vinifera]
          Length = 265

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 1/92 (1%)
 Frame = +2

Query: 5   NGIVCVGVEFACSDKQRKTDIYLWNPAIRQSKRILSSFNKCNNFTHVETLGFGYDGVDHD 184
           NG+VC+ +         K  I++WNP+I++SKR+ S         ++ +  FGYD +  D
Sbjct: 106 NGLVCISIR-----DMEKDTIFVWNPSIKESKRLPS--KPFEQLFYLVSYAFGYDSITDD 158

Query: 185 FKVFRVVGSPFSYAID-ATEVYSANKNAWRNV 277
           +KV R+V    + + +   EV+S   NAWR +
Sbjct: 159 YKVVRLVCCSINDSYEYHVEVFSLRSNAWRKI 190


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