BLASTX nr result

ID: Cnidium21_contig00035031 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00035031
         (265 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB33151.1| hypothetical protein [Carthamus tinctorius]            86   2e-15
gb|EEE57540.1| hypothetical protein OsJ_07864 [Oryza sativa Japo...    80   1e-13
ref|NP_001047685.1| Os02g0668200 [Oryza sativa Japonica Group] g...    80   1e-13
ref|XP_003581428.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-l...    79   4e-13
gb|ABN05718.1| FAR1; Zinc finger, SWIM-type [Medicago truncatula]      78   9e-13

>dbj|BAB33151.1| hypothetical protein [Carthamus tinctorius]
          Length = 699

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 39/87 (44%), Positives = 53/87 (60%)
 Frame = +2

Query: 5   TNKYNMVFCPFTGIDKHEKCVTFAFALLSKEDIPHLKWAFDEFLKAMGRNPVCIITDQCP 184
           T K+ M+F PF  +D H+K V    AL+ KE+  +  W  + F+KA G  P  +ITDQCP
Sbjct: 282 TQKHAMIFVPFVAVDNHKKSVVVGAALIRKENADYFTWVLNAFVKAHGSLPKLVITDQCP 341

Query: 185 AMRQTIPMSFPATEEFPATRHRLCMWH 265
           AM+Q I ++      FP T HRLC+WH
Sbjct: 342 AMKQAISIA------FPNTIHRLCLWH 362


>gb|EEE57540.1| hypothetical protein OsJ_07864 [Oryza sativa Japonica Group]
          Length = 805

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 40/88 (45%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
 Frame = +2

Query: 5   TNKYNMVFCPFTGIDKHEKCVTFAFALLSKEDIPHLKWAFDEFLKAM-GRNPVCIITDQC 181
           TN+Y+M+F PFTG++ H + V +  A L+ E IP   W F  FL+AM G+ P  IITD+ 
Sbjct: 323 TNQYDMIFAPFTGVNHHLQSVFYGAAFLANEKIPAYVWLFKTFLRAMGGKAPTLIITDED 382

Query: 182 PAMRQTIPMSFPATEEFPATRHRLCMWH 265
            +M+  I       + FP T HRLCMWH
Sbjct: 383 ASMKAAI------EKVFPTTVHRLCMWH 404


>ref|NP_001047685.1| Os02g0668200 [Oryza sativa Japonica Group]
           gi|113537216|dbj|BAF09599.1| Os02g0668200 [Oryza sativa
           Japonica Group]
          Length = 766

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 40/88 (45%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
 Frame = +2

Query: 5   TNKYNMVFCPFTGIDKHEKCVTFAFALLSKEDIPHLKWAFDEFLKAM-GRNPVCIITDQC 181
           TN+Y+M+F PFTG++ H + V +  A L+ E IP   W F  FL+AM G+ P  IITD+ 
Sbjct: 323 TNQYDMIFAPFTGVNHHLQSVFYGAAFLANEKIPAYVWLFKTFLRAMGGKAPTLIITDED 382

Query: 182 PAMRQTIPMSFPATEEFPATRHRLCMWH 265
            +M+  I       + FP T HRLCMWH
Sbjct: 383 ASMKAAI------EKVFPTTVHRLCMWH 404


>ref|XP_003581428.1| PREDICTED: protein FAR1-RELATED SEQUENCE 5-like [Brachypodium
           distachyon]
          Length = 548

 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 41/88 (46%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
 Frame = +2

Query: 5   TNKYNMVFCPFTGIDKHEKCVTFAFALLSKEDIPHLKWAFDEFLKAMGR-NPVCIITDQC 181
           TN+Y+M+F PFTG++ H + V F  A L  E I    W F  FL+AMG   P  IITD+ 
Sbjct: 240 TNQYDMIFAPFTGVNHHLQSVFFGAAFLLNEKIESYVWLFKTFLRAMGGVAPSLIITDEA 299

Query: 182 PAMRQTIPMSFPATEEFPATRHRLCMWH 265
            +M+  I       E FP T HRLCMWH
Sbjct: 300 GSMKNAI------DEVFPTTAHRLCMWH 321


>gb|ABN05718.1| FAR1; Zinc finger, SWIM-type [Medicago truncatula]
          Length = 800

 Score = 77.8 bits (190), Expect = 9e-13
 Identities = 41/88 (46%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
 Frame = +2

Query: 5   TNKYNMVFCPFTGIDKHEKCVTFAFALLSKEDIPHLKWAFDEFLKAM-GRNPVCIITDQC 181
           TNKY M+F PFTGI+ H + +TF  ALL  E      W F+ FLKAM G  PV IITDQ 
Sbjct: 332 TNKYFMIFAPFTGINHHRQSITFGAALLKNEKEESFVWLFETFLKAMGGHKPVMIITDQD 391

Query: 182 PAMRQTIPMSFPATEEFPATRHRLCMWH 265
             M+  I      +       HR CMWH
Sbjct: 392 GGMKNAIGAVLKGSS------HRFCMWH 413


Top