BLASTX nr result

ID: Cnidium21_contig00035023 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00035023
         (334 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001078500.2| uncharacterized protein [Arabidopsis thalian...   124   1e-26
ref|XP_002272351.1| PREDICTED: transmembrane and coiled-coil dom...   121   5e-26
emb|CAN59788.1| hypothetical protein VITISV_012480 [Vitis vinifera]   121   5e-26
ref|XP_002310840.1| predicted protein [Populus trichocarpa] gi|2...   119   2e-25
ref|XP_003548861.1| PREDICTED: uncharacterized membrane protein ...   113   2e-23

>ref|NP_001078500.2| uncharacterized protein [Arabidopsis thaliana]
           gi|332661235|gb|AEE86635.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 672

 Score =  124 bits (310), Expect = 1e-26
 Identities = 59/108 (54%), Positives = 77/108 (71%)
 Frame = -1

Query: 334 SVSDDPQLWVHDSSHLLRPIFRFLEINEQAWLGLEETAITSSADHHVESFLMLLAEESGD 155
           SVSDDP LWVH++S LLRP+FR LEI+  AWLGLE+TA +S A HH+ +F  LL+EE+ D
Sbjct: 59  SVSDDPSLWVHETSGLLRPVFRCLEIDSPAWLGLEQTACSSPAKHHIGAFTRLLSEEAND 118

Query: 154 TSSEMKDQEHALSKAVDHMXXXXXXXXXXXSKKENHREYEQACRDKFS 11
            S+EM +QE AL+KA D M           +KKE H+EYE  CR+K++
Sbjct: 119 ASAEMVEQEMALAKAADAMVHSIQCSVSIDAKKEKHQEYENECREKYA 166


>ref|XP_002272351.1| PREDICTED: transmembrane and coiled-coil domain-containing protein
           4 [Vitis vinifera] gi|297735050|emb|CBI17412.3| unnamed
           protein product [Vitis vinifera]
          Length = 662

 Score =  121 bits (304), Expect = 5e-26
 Identities = 64/111 (57%), Positives = 80/111 (72%), Gaps = 1/111 (0%)
 Frame = -1

Query: 334 SVSDDPQLWVHDSSHLLRPIFRFLEINEQAWLGLEETAITSSADHHVESFLMLLAEESGD 155
           SVS+DPQLWVH++S LLRP+F+ L+I  +AW GLEETA +S A HHV +FL L++EES +
Sbjct: 50  SVSEDPQLWVHENSGLLRPVFKSLKIENKAWTGLEETAGSSPAKHHVGAFLRLISEESAE 109

Query: 154 TSSEMKDQEHALSKAVDHM-XXXXXXXXXXXSKKENHREYEQACRDKFSDA 5
           +S++MKD E ALSKAVD M            SKKE HREYE  CR+K S A
Sbjct: 110 SSADMKDAELALSKAVDVMELSMETTSETSMSKKEKHREYENKCREKCSPA 160


>emb|CAN59788.1| hypothetical protein VITISV_012480 [Vitis vinifera]
          Length = 670

 Score =  121 bits (304), Expect = 5e-26
 Identities = 64/111 (57%), Positives = 80/111 (72%), Gaps = 1/111 (0%)
 Frame = -1

Query: 334 SVSDDPQLWVHDSSHLLRPIFRFLEINEQAWLGLEETAITSSADHHVESFLMLLAEESGD 155
           SVS+DPQLWVH++S LLRP+F+ L+I  +AW GLEETA +S A HHV +FL L++EES +
Sbjct: 50  SVSEDPQLWVHENSGLLRPVFKSLKIENKAWTGLEETAGSSPAKHHVGAFLRLISEESAE 109

Query: 154 TSSEMKDQEHALSKAVDHM-XXXXXXXXXXXSKKENHREYEQACRDKFSDA 5
           +S++MKD E ALSKAVD M            SKKE HREYE  CR+K S A
Sbjct: 110 SSADMKDAELALSKAVDVMELSMETTSETSMSKKEKHREYENKCREKCSPA 160


>ref|XP_002310840.1| predicted protein [Populus trichocarpa] gi|222853743|gb|EEE91290.1|
           predicted protein [Populus trichocarpa]
          Length = 681

 Score =  119 bits (299), Expect = 2e-25
 Identities = 65/112 (58%), Positives = 77/112 (68%), Gaps = 4/112 (3%)
 Frame = -1

Query: 334 SVSDDPQLWVHDSSHLLRPIFRFLEINEQAWLGLEETAITSSADHHVESFLMLLAEESGD 155
           SVS+DP LW+H++S LLRP+FRFLE+   AW GLEETA  S A HHV +FL LL+EESGD
Sbjct: 67  SVSEDPDLWIHENSGLLRPVFRFLEVESVAWTGLEETAGGSPAKHHVGAFLRLLSEESGD 126

Query: 154 ---TSSEMKDQEHALSKAVDHM-XXXXXXXXXXXSKKENHREYEQACRDKFS 11
              +SS+  DQE ALSKAVD M            SKKE H+EYE  CR+K S
Sbjct: 127 ASSSSSQSSDQEFALSKAVDVMEETMGANPVSSQSKKEKHKEYETQCREKLS 178


>ref|XP_003548861.1| PREDICTED: uncharacterized membrane protein F35D11.3-like [Glycine
           max]
          Length = 676

 Score =  113 bits (282), Expect = 2e-23
 Identities = 61/109 (55%), Positives = 74/109 (67%), Gaps = 1/109 (0%)
 Frame = -1

Query: 334 SVSDDPQLWVHDSSHLLRPIFRFLEINEQAWLGLEETAITSSADHHVESFLMLLAEESGD 155
           SVS+DP LWVH +S LLRP+F+FL+I+  AW GLEETA +SSA HHV  FL LL++E  D
Sbjct: 67  SVSEDPDLWVHSNSGLLRPVFKFLDIDSAAWSGLEETAGSSSATHHVGPFLRLLSQELDD 126

Query: 154 TSSEMKDQEHALSKAVDHM-XXXXXXXXXXXSKKENHREYEQACRDKFS 11
            SS+  DQE ALS AVD +            SK+E  REYE  CR+KFS
Sbjct: 127 GSSQRLDQERALSSAVDGIALDMRRNSESSESKREKLREYEHQCREKFS 175


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