BLASTX nr result

ID: Cnidium21_contig00035015 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00035015
         (461 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526974.1| copine, putative [Ricinus communis] gi|22353...   101   7e-20
ref|XP_002308745.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19
ref|XP_004138080.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2...   100   2e-19
ref|XP_002321646.1| predicted protein [Populus trichocarpa] gi|2...   100   2e-19
gb|AFN89139.1| RING-type ubiquitin ligase [Mesembryanthemum crys...    99   5e-19

>ref|XP_002526974.1| copine, putative [Ricinus communis] gi|223533726|gb|EEF35461.1|
           copine, putative [Ricinus communis]
          Length = 461

 Score =  101 bits (251), Expect = 7e-20
 Identities = 49/60 (81%), Positives = 52/60 (86%)
 Frame = -1

Query: 182 QSHSRYTRFDDDYSSLEQVTEALAGAGLESSNLIVGIDFTKSNEWTGARSYQRRSLHHLG 3
           Q   RY+R  DDY SL+QVTEALA AGLESSNLIVGIDFTKSNEWTGARSY RRSLHH+G
Sbjct: 87  QLDRRYSRIADDYKSLDQVTEALAQAGLESSNLIVGIDFTKSNEWTGARSYNRRSLHHIG 146


>ref|XP_002308745.1| predicted protein [Populus trichocarpa] gi|222854721|gb|EEE92268.1|
           predicted protein [Populus trichocarpa]
          Length = 403

 Score =  100 bits (248), Expect = 2e-19
 Identities = 48/61 (78%), Positives = 53/61 (86%)
 Frame = -1

Query: 185 NQSHSRYTRFDDDYSSLEQVTEALAGAGLESSNLIVGIDFTKSNEWTGARSYQRRSLHHL 6
           ++  SRY+R  DDY SLEQVT ALA AGLESSNLIVGIDFTKSNEWTGARS+ R+SLHHL
Sbjct: 42  SKPQSRYSRIGDDYHSLEQVTRALAQAGLESSNLIVGIDFTKSNEWTGARSFHRKSLHHL 101

Query: 5   G 3
           G
Sbjct: 102 G 102


>ref|XP_004138080.1| PREDICTED: E3 ubiquitin-protein ligase RGLG2-like [Cucumis sativus]
           gi|449525732|ref|XP_004169870.1| PREDICTED: E3
           ubiquitin-protein ligase RGLG2-like [Cucumis sativus]
          Length = 432

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 46/56 (82%), Positives = 53/56 (94%)
 Frame = -1

Query: 170 RYTRFDDDYSSLEQVTEALAGAGLESSNLIVGIDFTKSNEWTGARSYQRRSLHHLG 3
           +Y+R DD+Y+SL+QVTEALA AGLESSNLIVGIDFTKSNEWTGARS+ RRSLHH+G
Sbjct: 67  KYSRIDDNYNSLDQVTEALARAGLESSNLIVGIDFTKSNEWTGARSFNRRSLHHIG 122


>ref|XP_002321646.1| predicted protein [Populus trichocarpa] gi|222868642|gb|EEF05773.1|
           predicted protein [Populus trichocarpa]
          Length = 414

 Score = 99.8 bits (247), Expect = 2e-19
 Identities = 46/56 (82%), Positives = 53/56 (94%)
 Frame = -1

Query: 170 RYTRFDDDYSSLEQVTEALAGAGLESSNLIVGIDFTKSNEWTGARSYQRRSLHHLG 3
           +Y+R DD+Y+SLEQVT+ALA AGLESSNLIVGIDFTKSNEWTGARS+ RRSLHH+G
Sbjct: 63  KYSRIDDNYNSLEQVTDALARAGLESSNLIVGIDFTKSNEWTGARSFNRRSLHHIG 118


>gb|AFN89139.1| RING-type ubiquitin ligase [Mesembryanthemum crystallinum]
          Length = 472

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 46/56 (82%), Positives = 52/56 (92%)
 Frame = -1

Query: 170 RYTRFDDDYSSLEQVTEALAGAGLESSNLIVGIDFTKSNEWTGARSYQRRSLHHLG 3
           RY+R  DDYSSL+QVTEALA AGLESSNLIVGIDFTKSNEWTGA+S+ R+SLHH+G
Sbjct: 84  RYSRIADDYSSLDQVTEALAHAGLESSNLIVGIDFTKSNEWTGAKSFNRKSLHHIG 139


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