BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00035005
         (268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003531534.1| PREDICTED: H/ACA ribonucleoprotein complex s...   143   1e-32
ref|NP_191274.1| H/ACA ribonucleoprotein complex subunit 4 [Arab...   143   2e-32
ref|XP_003545704.1| PREDICTED: H/ACA ribonucleoprotein complex s...   141   6e-32
ref|XP_002878134.1| hypothetical protein ARALYDRAFT_486159 [Arab...   141   6e-32
ref|XP_002270073.1| PREDICTED: H/ACA ribonucleoprotein complex s...   140   1e-31

>ref|XP_003531534.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like [Glycine
           max]
          Length = 555

 Score =  143 bits (361), Expect = 1e-32
 Identities = 69/90 (76%), Positives = 78/90 (86%), Gaps = 2/90 (2%)
 Frame = -3

Query: 266 VAKIKRVVMDRDTYPRKWGLGPKASMKKKLVAEGKLDKHGKPNEKTPAEWLRNVVLPTGG 87
           VAKIKRVVMDRDTYPRKWGLGP+ASMKK+L++EGKLDKHGKPNEKTP EWLRN+VLPTGG
Sbjct: 327 VAKIKRVVMDRDTYPRKWGLGPRASMKKRLISEGKLDKHGKPNEKTPQEWLRNLVLPTGG 386

Query: 86  DSIVASLAAVSEPV--KAEAVEEGDEKKKK 3
           DS++A LAA  EP   K +  EEGD + KK
Sbjct: 387 DSMIAGLAAAPEPEDDKLQKKEEGDGEGKK 416


>ref|NP_191274.1| H/ACA ribonucleoprotein complex subunit 4 [Arabidopsis thaliana]
           gi|67460428|sp|Q9LD90.1|CBF5_ARATH RecName: Full=H/ACA
           ribonucleoprotein complex subunit 4; AltName: Full=CBF5
           homolog; AltName: Full=Dyskerin; AltName:
           Full=Nopp-140-associated protein of 57 kDa homolog;
           Short=AtNAP57; AltName: Full=Nucleolar protein NAP57
           homolog gi|8901186|gb|AAF43210.2|AF234984_1 putative
           pseudouridine synthase [Arabidopsis thaliana]
           gi|6911885|emb|CAB72185.1| putative protein [Arabidopsis
           thaliana] gi|28392852|gb|AAO41863.1| unknown protein
           [Arabidopsis thaliana] gi|225898727|dbj|BAH30494.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332646100|gb|AEE79621.1| H/ACA ribonucleoprotein
           complex subunit 4 [Arabidopsis thaliana]
          Length = 565

 Score =  143 bits (360), Expect = 2e-32
 Identities = 68/90 (75%), Positives = 78/90 (86%), Gaps = 2/90 (2%)
 Frame = -3

Query: 266 VAKIKRVVMDRDTYPRKWGLGPKASMKKKLVAEGKLDKHGKPNEKTPAEWLRNVVLPTGG 87
           VAKIKRVVMDRDTYPRKWGLGP+ASMKKKL+A+GKLDKHGKPNEKTP EW RNVVLPTGG
Sbjct: 354 VAKIKRVVMDRDTYPRKWGLGPRASMKKKLIADGKLDKHGKPNEKTPVEWSRNVVLPTGG 413

Query: 86  DSIVASLAAVSEPVKAEAV--EEGDEKKKK 3
           D+I+A  AA  E +KA+A   E G+ +K+K
Sbjct: 414 DAIIAGAAAAPEEIKADAENGEAGEARKRK 443


>ref|XP_003545704.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like [Glycine
           max]
          Length = 589

 Score =  141 bits (355), Expect = 6e-32
 Identities = 68/92 (73%), Positives = 77/92 (83%), Gaps = 5/92 (5%)
 Frame = -3

Query: 266 VAKIKRVVMDRDTYPRKWGLGPKASMKKKLVAEGKLDKHGKPNEKTPAEWLRNVVLPTGG 87
           VAKIKRVVMDRDTYPRKWGLGP+ASMKK+L++EGKLDKHGKPNEKTP EWLRN+VLPTGG
Sbjct: 360 VAKIKRVVMDRDTYPRKWGLGPRASMKKRLISEGKLDKHGKPNEKTPQEWLRNLVLPTGG 419

Query: 86  DSIVASLAAVSEP-----VKAEAVEEGDEKKK 6
           DS++A LAA  EP      K E   EG ++KK
Sbjct: 420 DSVIAGLAAAPEPEDDKIQKKEGDGEGKKRKK 451


>ref|XP_002878134.1| hypothetical protein ARALYDRAFT_486159 [Arabidopsis lyrata subsp.
           lyrata] gi|297323972|gb|EFH54393.1| hypothetical protein
           ARALYDRAFT_486159 [Arabidopsis lyrata subsp. lyrata]
          Length = 561

 Score =  141 bits (355), Expect = 6e-32
 Identities = 68/90 (75%), Positives = 77/90 (85%), Gaps = 2/90 (2%)
 Frame = -3

Query: 266 VAKIKRVVMDRDTYPRKWGLGPKASMKKKLVAEGKLDKHGKPNEKTPAEWLRNVVLPTGG 87
           VAKIKRVVMDRDTYPRKWGLGP+ASMKKKL+A+GKLDKHGKPNEKTP EW RNVVLPTGG
Sbjct: 354 VAKIKRVVMDRDTYPRKWGLGPRASMKKKLIADGKLDKHGKPNEKTPVEWSRNVVLPTGG 413

Query: 86  DSIVASLAAVSEPVKAEAV--EEGDEKKKK 3
           D+I+A  AA    +KAEA   E G+ +K+K
Sbjct: 414 DAIIAGAAAAPVEIKAEAENGEAGEVRKRK 443


>ref|XP_002270073.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4 [Vitis
           vinifera]
          Length = 586

 Score =  140 bits (353), Expect = 1e-31
 Identities = 71/93 (76%), Positives = 83/93 (89%), Gaps = 5/93 (5%)
 Frame = -3

Query: 266 VAKIKRVVMDRDTYPRKWGLGPKASMKKKLVAEGKLDKHGKPNEKTPAEWLRNVVLPTGG 87
           VA+IKRVVMDRDTYPRKWGLGP+A+MKKKL+ EGKL+KHGKPNE TP+EWLRNVVLPTGG
Sbjct: 366 VARIKRVVMDRDTYPRKWGLGPRAAMKKKLITEGKLNKHGKPNENTPSEWLRNVVLPTGG 425

Query: 86  DSIVASLAAVSEP-VKAEA-VEE---GDEKKKK 3
           DS+VASLAA  EP VKAE  V+E   G+++K+K
Sbjct: 426 DSMVASLAAAVEPTVKAETDVKEEIDGEQRKRK 458