BLASTX nr result
ID: Cnidium21_contig00035005
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00035005 (268 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003531534.1| PREDICTED: H/ACA ribonucleoprotein complex s... 143 1e-32 ref|NP_191274.1| H/ACA ribonucleoprotein complex subunit 4 [Arab... 143 2e-32 ref|XP_003545704.1| PREDICTED: H/ACA ribonucleoprotein complex s... 141 6e-32 ref|XP_002878134.1| hypothetical protein ARALYDRAFT_486159 [Arab... 141 6e-32 ref|XP_002270073.1| PREDICTED: H/ACA ribonucleoprotein complex s... 140 1e-31 >ref|XP_003531534.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like [Glycine max] Length = 555 Score = 143 bits (361), Expect = 1e-32 Identities = 69/90 (76%), Positives = 78/90 (86%), Gaps = 2/90 (2%) Frame = -3 Query: 266 VAKIKRVVMDRDTYPRKWGLGPKASMKKKLVAEGKLDKHGKPNEKTPAEWLRNVVLPTGG 87 VAKIKRVVMDRDTYPRKWGLGP+ASMKK+L++EGKLDKHGKPNEKTP EWLRN+VLPTGG Sbjct: 327 VAKIKRVVMDRDTYPRKWGLGPRASMKKRLISEGKLDKHGKPNEKTPQEWLRNLVLPTGG 386 Query: 86 DSIVASLAAVSEPV--KAEAVEEGDEKKKK 3 DS++A LAA EP K + EEGD + KK Sbjct: 387 DSMIAGLAAAPEPEDDKLQKKEEGDGEGKK 416 >ref|NP_191274.1| H/ACA ribonucleoprotein complex subunit 4 [Arabidopsis thaliana] gi|67460428|sp|Q9LD90.1|CBF5_ARATH RecName: Full=H/ACA ribonucleoprotein complex subunit 4; AltName: Full=CBF5 homolog; AltName: Full=Dyskerin; AltName: Full=Nopp-140-associated protein of 57 kDa homolog; Short=AtNAP57; AltName: Full=Nucleolar protein NAP57 homolog gi|8901186|gb|AAF43210.2|AF234984_1 putative pseudouridine synthase [Arabidopsis thaliana] gi|6911885|emb|CAB72185.1| putative protein [Arabidopsis thaliana] gi|28392852|gb|AAO41863.1| unknown protein [Arabidopsis thaliana] gi|225898727|dbj|BAH30494.1| hypothetical protein [Arabidopsis thaliana] gi|332646100|gb|AEE79621.1| H/ACA ribonucleoprotein complex subunit 4 [Arabidopsis thaliana] Length = 565 Score = 143 bits (360), Expect = 2e-32 Identities = 68/90 (75%), Positives = 78/90 (86%), Gaps = 2/90 (2%) Frame = -3 Query: 266 VAKIKRVVMDRDTYPRKWGLGPKASMKKKLVAEGKLDKHGKPNEKTPAEWLRNVVLPTGG 87 VAKIKRVVMDRDTYPRKWGLGP+ASMKKKL+A+GKLDKHGKPNEKTP EW RNVVLPTGG Sbjct: 354 VAKIKRVVMDRDTYPRKWGLGPRASMKKKLIADGKLDKHGKPNEKTPVEWSRNVVLPTGG 413 Query: 86 DSIVASLAAVSEPVKAEAV--EEGDEKKKK 3 D+I+A AA E +KA+A E G+ +K+K Sbjct: 414 DAIIAGAAAAPEEIKADAENGEAGEARKRK 443 >ref|XP_003545704.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4-like [Glycine max] Length = 589 Score = 141 bits (355), Expect = 6e-32 Identities = 68/92 (73%), Positives = 77/92 (83%), Gaps = 5/92 (5%) Frame = -3 Query: 266 VAKIKRVVMDRDTYPRKWGLGPKASMKKKLVAEGKLDKHGKPNEKTPAEWLRNVVLPTGG 87 VAKIKRVVMDRDTYPRKWGLGP+ASMKK+L++EGKLDKHGKPNEKTP EWLRN+VLPTGG Sbjct: 360 VAKIKRVVMDRDTYPRKWGLGPRASMKKRLISEGKLDKHGKPNEKTPQEWLRNLVLPTGG 419 Query: 86 DSIVASLAAVSEP-----VKAEAVEEGDEKKK 6 DS++A LAA EP K E EG ++KK Sbjct: 420 DSVIAGLAAAPEPEDDKIQKKEGDGEGKKRKK 451 >ref|XP_002878134.1| hypothetical protein ARALYDRAFT_486159 [Arabidopsis lyrata subsp. lyrata] gi|297323972|gb|EFH54393.1| hypothetical protein ARALYDRAFT_486159 [Arabidopsis lyrata subsp. lyrata] Length = 561 Score = 141 bits (355), Expect = 6e-32 Identities = 68/90 (75%), Positives = 77/90 (85%), Gaps = 2/90 (2%) Frame = -3 Query: 266 VAKIKRVVMDRDTYPRKWGLGPKASMKKKLVAEGKLDKHGKPNEKTPAEWLRNVVLPTGG 87 VAKIKRVVMDRDTYPRKWGLGP+ASMKKKL+A+GKLDKHGKPNEKTP EW RNVVLPTGG Sbjct: 354 VAKIKRVVMDRDTYPRKWGLGPRASMKKKLIADGKLDKHGKPNEKTPVEWSRNVVLPTGG 413 Query: 86 DSIVASLAAVSEPVKAEAV--EEGDEKKKK 3 D+I+A AA +KAEA E G+ +K+K Sbjct: 414 DAIIAGAAAAPVEIKAEAENGEAGEVRKRK 443 >ref|XP_002270073.1| PREDICTED: H/ACA ribonucleoprotein complex subunit 4 [Vitis vinifera] Length = 586 Score = 140 bits (353), Expect = 1e-31 Identities = 71/93 (76%), Positives = 83/93 (89%), Gaps = 5/93 (5%) Frame = -3 Query: 266 VAKIKRVVMDRDTYPRKWGLGPKASMKKKLVAEGKLDKHGKPNEKTPAEWLRNVVLPTGG 87 VA+IKRVVMDRDTYPRKWGLGP+A+MKKKL+ EGKL+KHGKPNE TP+EWLRNVVLPTGG Sbjct: 366 VARIKRVVMDRDTYPRKWGLGPRAAMKKKLITEGKLNKHGKPNENTPSEWLRNVVLPTGG 425 Query: 86 DSIVASLAAVSEP-VKAEA-VEE---GDEKKKK 3 DS+VASLAA EP VKAE V+E G+++K+K Sbjct: 426 DSMVASLAAAVEPTVKAETDVKEEIDGEQRKRK 458