BLASTX nr result

ID: Cnidium21_contig00034996 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00034996
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AEC12446.1| repressor of gene silencing 1 [Gossypium hirsutum]     100   2e-19
emb|CBI30244.3| unnamed protein product [Vitis vinifera]               96   2e-18
ref|XP_002277401.1| PREDICTED: transcriptional activator DEMETER...    96   2e-18
emb|CAN77395.1| hypothetical protein VITISV_035357 [Vitis vinifera]    96   2e-18
dbj|BAF52855.1| repressor of silencing 1 [Nicotiana tabacum]           96   3e-18

>gb|AEC12446.1| repressor of gene silencing 1 [Gossypium hirsutum]
          Length = 1758

 Score =  100 bits (248), Expect = 2e-19
 Identities = 53/109 (48%), Positives = 74/109 (67%), Gaps = 6/109 (5%)
 Frame = +1

Query: 16   TNNQGSEIESFRTKGKDKIEDKKNEKHNKD---WDQLRK---VYSRSRERNDDNMDAVDW 177
            T++  S  E     G+ K E +K +K  KD   WD LRK   V  R RE+ +  MD++DW
Sbjct: 1171 THDSSSNKELNSMVGELKSEGRKVKKEKKDDFDWDSLRKQTEVNGRKREKTERTMDSLDW 1230

Query: 178  ESVRQATIDELADTIKKRGMHYILAIKIKAYLDRAMRDHGSMDLEWLRD 324
            E+VR A + E+A+TIK+RGM+ +LA +IK +L+R +RDHGS+DLEWLRD
Sbjct: 1231 EAVRCAEVHEIAETIKERGMNNVLAQRIKDFLNRLVRDHGSIDLEWLRD 1279


>emb|CBI30244.3| unnamed protein product [Vitis vinifera]
          Length = 1470

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 50/106 (47%), Positives = 75/106 (70%), Gaps = 3/106 (2%)
 Frame = +1

Query: 16   TNNQGSEIESFRTKGKDKIEDKKNEKHNKDWDQLRK---VYSRSRERNDDNMDAVDWESV 186
            ++   +EI    +K K K + ++ EK+   WD LRK   V  R RER  + MD++DWE+V
Sbjct: 900  SSKASNEIGVDTSKAK-KGKARREEKNTLHWDNLRKEAQVNGRKRERTVNTMDSLDWEAV 958

Query: 187  RQATIDELADTIKKRGMHYILAIKIKAYLDRAMRDHGSMDLEWLRD 324
            R + ++E+A+TIK+RGM+ +LA +IK +L+R +RDHGS+DLEWLRD
Sbjct: 959  RCSDVNEIANTIKERGMNNMLAERIKDFLNRLVRDHGSIDLEWLRD 1004


>ref|XP_002277401.1| PREDICTED: transcriptional activator DEMETER-like [Vitis vinifera]
          Length = 1942

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 50/106 (47%), Positives = 75/106 (70%), Gaps = 3/106 (2%)
 Frame = +1

Query: 16   TNNQGSEIESFRTKGKDKIEDKKNEKHNKDWDQLRK---VYSRSRERNDDNMDAVDWESV 186
            ++   +EI    +K K K + ++ EK+   WD LRK   V  R RER  + MD++DWE+V
Sbjct: 1372 SSKASNEIGVDTSKAK-KGKARREEKNTLHWDNLRKEAQVNGRKRERTVNTMDSLDWEAV 1430

Query: 187  RQATIDELADTIKKRGMHYILAIKIKAYLDRAMRDHGSMDLEWLRD 324
            R + ++E+A+TIK+RGM+ +LA +IK +L+R +RDHGS+DLEWLRD
Sbjct: 1431 RCSDVNEIANTIKERGMNNMLAERIKDFLNRLVRDHGSIDLEWLRD 1476


>emb|CAN77395.1| hypothetical protein VITISV_035357 [Vitis vinifera]
          Length = 1824

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 50/106 (47%), Positives = 75/106 (70%), Gaps = 3/106 (2%)
 Frame = +1

Query: 16   TNNQGSEIESFRTKGKDKIEDKKNEKHNKDWDQLRK---VYSRSRERNDDNMDAVDWESV 186
            ++   +EI    +K K K + ++ EK+   WD LRK   V  R RER  + MD++DWE+V
Sbjct: 1249 SSKASNEIGVDTSKAK-KGKARREEKNTLHWDNLRKEAQVNGRKRERTVNTMDSLDWEAV 1307

Query: 187  RQATIDELADTIKKRGMHYILAIKIKAYLDRAMRDHGSMDLEWLRD 324
            R + ++E+A+TIK+RGM+ +LA +IK +L+R +RDHGS+DLEWLRD
Sbjct: 1308 RCSDVNEIANTIKERGMNNMLAERIKDFLNRLVRDHGSIDLEWLRD 1353


>dbj|BAF52855.1| repressor of silencing 1 [Nicotiana tabacum]
          Length = 1796

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 50/112 (44%), Positives = 73/112 (65%), Gaps = 7/112 (6%)
 Frame = +1

Query: 10   SITNNQGSEIESFRTKGKDKIEDKKN----EKHNKDWDQLR---KVYSRSRERNDDNMDA 168
            S +NN+    +S   +  D  + KK     EK N DWD LR   +   + RER  + MD+
Sbjct: 1211 SNSNNKKHHADSTLDRANDNTKAKKERPGKEKQNVDWDSLRLQAQNNGKKRERTANTMDS 1270

Query: 169  VDWESVRQATIDELADTIKKRGMHYILAIKIKAYLDRAMRDHGSMDLEWLRD 324
            +DWE+VR A ++E+A TI++RGM+ +LA +IK +L+R  R+HGS+DLEWLRD
Sbjct: 1271 LDWEAVRCADVNEIAHTIRERGMNNMLAERIKDFLNRIFREHGSIDLEWLRD 1322


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