BLASTX nr result

ID: Cnidium21_contig00034980 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00034980
         (359 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_190696.1| tetratricopeptide repeat domain-containing prot...   227   9e-58
ref|XP_002876079.1| hypothetical protein ARALYDRAFT_485479 [Arab...   224   7e-57
ref|XP_003520163.1| PREDICTED: uncharacterized protein LOC100803...   223   1e-56
ref|XP_003629273.1| hypothetical protein MTR_8g075260 [Medicago ...   222   3e-56
ref|XP_002529643.1| conserved hypothetical protein [Ricinus comm...   221   4e-56

>ref|NP_190696.1| tetratricopeptide repeat domain-containing protein [Arabidopsis
           thaliana] gi|6562280|emb|CAB62650.1| MS5-like protein
           [Arabidopsis thaliana] gi|30102656|gb|AAP21246.1|
           At3g51280 [Arabidopsis thaliana]
           gi|110735963|dbj|BAE99956.1| MS5 like protein
           [Arabidopsis thaliana] gi|332645252|gb|AEE78773.1|
           tetratricopeptide repeat domain-containing protein
           [Arabidopsis thaliana]
          Length = 430

 Score =  227 bits (578), Expect = 9e-58
 Identities = 110/119 (92%), Positives = 116/119 (97%)
 Frame = -1

Query: 359 KSAPCSPAKPLGVSRTRSESFHVAHKVPVGDSPYVRAKNVQLVEKDPERAIPLFWAAINS 180
           KSAPCSPAKPLG+SRT+SESFH  HKVPVGDSPYVRAKNVQLVEKDPERAIPLFW AIN+
Sbjct: 10  KSAPCSPAKPLGISRTQSESFHAIHKVPVGDSPYVRAKNVQLVEKDPERAIPLFWKAINA 69

Query: 179 GDRVDSALKDMAIVMKQQNRSEEAIEAIKSLRIRCSDQSQESLDNILLDLYKRCGRLDD 3
           GDRVDSALKDMAIVMKQQNR+EEAIEAIKSLR+RCSDQ+QESLDNILLDLYKRCGRLDD
Sbjct: 70  GDRVDSALKDMAIVMKQQNRAEEAIEAIKSLRVRCSDQAQESLDNILLDLYKRCGRLDD 128


>ref|XP_002876079.1| hypothetical protein ARALYDRAFT_485479 [Arabidopsis lyrata subsp.
           lyrata] gi|297321917|gb|EFH52338.1| hypothetical protein
           ARALYDRAFT_485479 [Arabidopsis lyrata subsp. lyrata]
          Length = 432

 Score =  224 bits (570), Expect = 7e-57
 Identities = 109/119 (91%), Positives = 115/119 (96%)
 Frame = -1

Query: 359 KSAPCSPAKPLGVSRTRSESFHVAHKVPVGDSPYVRAKNVQLVEKDPERAIPLFWAAINS 180
           KSAPCSPAKPLG+SRT+SESFH  HKVPVGDSPYVRAKNVQLVEKDPERAIPLFW AIN+
Sbjct: 10  KSAPCSPAKPLGISRTQSESFHAIHKVPVGDSPYVRAKNVQLVEKDPERAIPLFWKAINA 69

Query: 179 GDRVDSALKDMAIVMKQQNRSEEAIEAIKSLRIRCSDQSQESLDNILLDLYKRCGRLDD 3
           GDRVDSALKDMAIVMKQQNR+EEAIEAIKSLR+RCSDQ+QESLDNILLDLYK CGRLDD
Sbjct: 70  GDRVDSALKDMAIVMKQQNRAEEAIEAIKSLRVRCSDQAQESLDNILLDLYKWCGRLDD 128


>ref|XP_003520163.1| PREDICTED: uncharacterized protein LOC100803414 [Glycine max]
          Length = 500

 Score =  223 bits (569), Expect = 1e-56
 Identities = 112/120 (93%), Positives = 117/120 (97%), Gaps = 1/120 (0%)
 Frame = -1

Query: 359 KSAPCSPAKPLGV-SRTRSESFHVAHKVPVGDSPYVRAKNVQLVEKDPERAIPLFWAAIN 183
           KSAPCSPAKPLGV  RTRSESFHVAHKVPVGD+PYVRAKNVQLV+KDPERAIPLFWAAIN
Sbjct: 16  KSAPCSPAKPLGVVPRTRSESFHVAHKVPVGDTPYVRAKNVQLVDKDPERAIPLFWAAIN 75

Query: 182 SGDRVDSALKDMAIVMKQQNRSEEAIEAIKSLRIRCSDQSQESLDNILLDLYKRCGRLDD 3
           +GDRVDSALKDMAIVMKQQNR+EEAIEAIKSLR RCSDQ+QESLDNILLDLYKRCGRLDD
Sbjct: 76  AGDRVDSALKDMAIVMKQQNRAEEAIEAIKSLRSRCSDQAQESLDNILLDLYKRCGRLDD 135


>ref|XP_003629273.1| hypothetical protein MTR_8g075260 [Medicago truncatula]
           gi|355523295|gb|AET03749.1| hypothetical protein
           MTR_8g075260 [Medicago truncatula]
          Length = 479

 Score =  222 bits (565), Expect = 3e-56
 Identities = 108/119 (90%), Positives = 115/119 (96%)
 Frame = -1

Query: 359 KSAPCSPAKPLGVSRTRSESFHVAHKVPVGDSPYVRAKNVQLVEKDPERAIPLFWAAINS 180
           KSAP SPAKPLGV RTRSESFH+ HKVP+GD+PYVRAKNVQLV+KDPERAIPLFWAAIN+
Sbjct: 16  KSAPSSPAKPLGVPRTRSESFHITHKVPIGDTPYVRAKNVQLVDKDPERAIPLFWAAINA 75

Query: 179 GDRVDSALKDMAIVMKQQNRSEEAIEAIKSLRIRCSDQSQESLDNILLDLYKRCGRLDD 3
           GDRVDSALKDMAIVMKQQNR+EEAIEAIKSLR RCSDQ+QESLDNILLDLYKRCGRLDD
Sbjct: 76  GDRVDSALKDMAIVMKQQNRAEEAIEAIKSLRSRCSDQAQESLDNILLDLYKRCGRLDD 134


>ref|XP_002529643.1| conserved hypothetical protein [Ricinus communis]
           gi|223530869|gb|EEF32730.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 482

 Score =  221 bits (564), Expect = 4e-56
 Identities = 109/119 (91%), Positives = 115/119 (96%)
 Frame = -1

Query: 359 KSAPCSPAKPLGVSRTRSESFHVAHKVPVGDSPYVRAKNVQLVEKDPERAIPLFWAAINS 180
           KSAP SPAKPLGVSRTRSESFH  HKVPVGD+PYVRAKNVQLV+KDPE+AIPLFWAAIN+
Sbjct: 16  KSAPTSPAKPLGVSRTRSESFHAIHKVPVGDTPYVRAKNVQLVDKDPEKAIPLFWAAINA 75

Query: 179 GDRVDSALKDMAIVMKQQNRSEEAIEAIKSLRIRCSDQSQESLDNILLDLYKRCGRLDD 3
           GDRVDSALKDMAIVMKQQNR+EEAIEAIKSLR RCSDQ+QESLDNILLDLYKRCGRLDD
Sbjct: 76  GDRVDSALKDMAIVMKQQNRAEEAIEAIKSLRSRCSDQAQESLDNILLDLYKRCGRLDD 134


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