BLASTX nr result

ID: Cnidium21_contig00034925 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00034925
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272859.1| PREDICTED: glutamate receptor 3.3 [Vitis vin...   154   9e-36
emb|CAN72607.1| hypothetical protein VITISV_021339 [Vitis vinifera]   154   9e-36
ref|XP_002510703.1| glutamate receptor 3 plant, putative [Ricinu...   148   5e-34
dbj|BAL15056.1| glutamate receptor 3.3 [Solanum lycopersicum]         144   1e-32
ref|XP_002306988.1| glutamate-gated kainate-type ion channel rec...   143   1e-32

>ref|XP_002272859.1| PREDICTED: glutamate receptor 3.3 [Vitis vinifera]
           gi|297745576|emb|CBI40741.3| unnamed protein product
           [Vitis vinifera]
          Length = 934

 Score =  154 bits (388), Expect = 9e-36
 Identities = 75/109 (68%), Positives = 86/109 (78%), Gaps = 1/109 (0%)
 Frame = -1

Query: 325 VAQHLGMMTNGYVWIATDWXXXXXXXXXXXS-EKMDSMQGVLVLRQHTPDSDRKRTFISR 149
           VA++LGMM NGYVWIATDW           + + MDSMQGVLVLR+HTPDSDRKR F+SR
Sbjct: 242 VARYLGMMQNGYVWIATDWLSSVLDTSSPLASDTMDSMQGVLVLRRHTPDSDRKRAFLSR 301

Query: 148 WNNLTEGSVGLNSYALYAYDTVWLVAHAIDSFLNQGGIISFSTNSKLSS 2
           W  LT GS+GLNSY LYAYDTVWL+AHA+D+F NQGG ISFS +SKL S
Sbjct: 302 WKKLTGGSLGLNSYGLYAYDTVWLLAHALDAFFNQGGTISFSNDSKLLS 350


>emb|CAN72607.1| hypothetical protein VITISV_021339 [Vitis vinifera]
          Length = 916

 Score =  154 bits (388), Expect = 9e-36
 Identities = 75/109 (68%), Positives = 86/109 (78%), Gaps = 1/109 (0%)
 Frame = -1

Query: 325 VAQHLGMMTNGYVWIATDWXXXXXXXXXXXS-EKMDSMQGVLVLRQHTPDSDRKRTFISR 149
           VA++LGMM NGYVWIATDW           + + MDSMQGVLVLR+HTPDSDRKR F+SR
Sbjct: 224 VARYLGMMQNGYVWIATDWLSSVLDTSSPLASDTMDSMQGVLVLRRHTPDSDRKRAFLSR 283

Query: 148 WNNLTEGSVGLNSYALYAYDTVWLVAHAIDSFLNQGGIISFSTNSKLSS 2
           W  LT GS+GLNSY LYAYDTVWL+AHA+D+F NQGG ISFS +SKL S
Sbjct: 284 WKKLTGGSLGLNSYGLYAYDTVWLLAHALDAFFNQGGTISFSNDSKLLS 332


>ref|XP_002510703.1| glutamate receptor 3 plant, putative [Ricinus communis]
           gi|223551404|gb|EEF52890.1| glutamate receptor 3 plant,
           putative [Ricinus communis]
          Length = 927

 Score =  148 bits (373), Expect = 5e-34
 Identities = 73/109 (66%), Positives = 84/109 (77%), Gaps = 1/109 (0%)
 Frame = -1

Query: 325 VAQHLGMMTNGYVWIATDWXXXXXXXXXXXS-EKMDSMQGVLVLRQHTPDSDRKRTFISR 149
           VA++LGMM NGYVWIATDW             E MD+MQGVL LRQHTP SDRKR+F S 
Sbjct: 242 VAKYLGMMGNGYVWIATDWLSSFLDTFSPLPSETMDTMQGVLALRQHTPQSDRKRSFSSA 301

Query: 148 WNNLTEGSVGLNSYALYAYDTVWLVAHAIDSFLNQGGIISFSTNSKLSS 2
           W+ LT GS GLNSY LYAYD+VWL+AHAID+FL+QGGIISFS +S+L S
Sbjct: 302 WSKLTGGSFGLNSYGLYAYDSVWLIAHAIDAFLDQGGIISFSNDSRLHS 350


>dbj|BAL15056.1| glutamate receptor 3.3 [Solanum lycopersicum]
          Length = 808

 Score =  144 bits (362), Expect = 1e-32
 Identities = 71/109 (65%), Positives = 82/109 (75%), Gaps = 1/109 (0%)
 Frame = -1

Query: 325 VAQHLGMMTNGYVWIATDWXXXXXXXXXXXSEK-MDSMQGVLVLRQHTPDSDRKRTFISR 149
           VA +LGMM +GYVWI+TDW            +  MD+MQGVLVLRQHTP+S  KR F SR
Sbjct: 247 VAHYLGMMGDGYVWISTDWLTTVLDSSPPLPQDTMDTMQGVLVLRQHTPESKNKRAFSSR 306

Query: 148 WNNLTEGSVGLNSYALYAYDTVWLVAHAIDSFLNQGGIISFSTNSKLSS 2
           WN LT G +GLNSYAL+AYDTVWLVAHAIDSF NQGG ISFS ++KL +
Sbjct: 307 WNKLTGGLLGLNSYALHAYDTVWLVAHAIDSFFNQGGTISFSNDTKLQT 355


>ref|XP_002306988.1| glutamate-gated kainate-type ion channel receptor subunit GluR5
           [Populus trichocarpa] gi|222856437|gb|EEE93984.1|
           glutamate-gated kainate-type ion channel receptor
           subunit GluR5 [Populus trichocarpa]
          Length = 897

 Score =  143 bits (361), Expect = 1e-32
 Identities = 70/109 (64%), Positives = 82/109 (75%), Gaps = 1/109 (0%)
 Frame = -1

Query: 325 VAQHLGMMTNGYVWIATDWXXXXXXXXXXXS-EKMDSMQGVLVLRQHTPDSDRKRTFISR 149
           +A HL MM NG+VWIATDW             E MDS+QGVLVLRQHTPDSDR R F SR
Sbjct: 233 MANHLEMMGNGWVWIATDWLSSVLDSASPLPSETMDSVQGVLVLRQHTPDSDRNRAFSSR 292

Query: 148 WNNLTEGSVGLNSYALYAYDTVWLVAHAIDSFLNQGGIISFSTNSKLSS 2
           W+ LT G +GL+SY LYAYD+VWL+AHA+D+F NQGGIISFS +S+L S
Sbjct: 293 WHKLTGGYLGLHSYGLYAYDSVWLIAHALDAFFNQGGIISFSNDSRLPS 341


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