BLASTX nr result

ID: Cnidium21_contig00034890 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00034890
         (456 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329196.1| predicted protein [Populus trichocarpa] gi|2...    76   2e-12
ref|NP_200638.1| putative inactive receptor kinase [Arabidopsis ...    74   2e-11
ref|XP_002520893.1| Receptor protein kinase CLAVATA1 precursor, ...    72   4e-11
ref|XP_002864562.1| predicted protein [Arabidopsis lyrata subsp....    71   8e-11
gb|ACA61611.1| hypothetical protein AP2_E06.2 [Arabidopsis lyrat...    71   1e-10

>ref|XP_002329196.1| predicted protein [Populus trichocarpa] gi|222870977|gb|EEF08108.1|
           predicted protein [Populus trichocarpa]
          Length = 630

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 36/61 (59%), Positives = 43/61 (70%)
 Frame = +1

Query: 274 MKPCSPFQLIASVFAIFVFLPQTFCDLNSDQQALLAFAAAVPHGRKLNWNSSTSICRTWV 453
           MK  S    +  +F I   +PQ   DLNSD+QALL FAAAVPH RKLNWN+STS+C +WV
Sbjct: 1   MKLLSSISTVVFLFFILPVVPQIIADLNSDRQALLDFAAAVPHIRKLNWNASTSVCTSWV 60

Query: 454 G 456
           G
Sbjct: 61  G 61


>ref|NP_200638.1| putative inactive receptor kinase [Arabidopsis thaliana]
           gi|186532563|ref|NP_001119458.1| putative inactive
           receptor kinase [Arabidopsis thaliana]
           gi|75335557|sp|Q9LVM0.1|Y5830_ARATH RecName:
           Full=Probable inactive receptor kinase At5g58300; Flags:
           Precursor gi|8777331|dbj|BAA96921.1| receptor-like
           protein kinase [Arabidopsis thaliana]
           gi|18086391|gb|AAL57654.1| unknown protein [Arabidopsis
           thaliana] gi|24797034|gb|AAN64529.1| At5g58299/At5g58299
           [Arabidopsis thaliana] gi|224589729|gb|ACN59396.1|
           leucine-rich repeat receptor-like protein kinase
           [Arabidopsis thaliana] gi|332009647|gb|AED97030.1|
           putative inactive receptor kinase [Arabidopsis thaliana]
           gi|332009648|gb|AED97031.1| putative inactive receptor
           kinase [Arabidopsis thaliana]
          Length = 654

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 37/77 (48%), Positives = 50/77 (64%), Gaps = 5/77 (6%)
 Frame = +1

Query: 241 HIFSYRADRFLMKPCSPFQLIASVFAIFVFLPQTFC-----DLNSDQQALLAFAAAVPHG 405
           H   Y    F ++P   F  +++    F+F+  TFC     DLNSD+QALLAFAA+VPH 
Sbjct: 5   HFQFYVGPVFTLRPSKGF--LSTCLVSFLFVTTTFCSYAIADLNSDRQALLAFAASVPHL 62

Query: 406 RKLNWNSSTSICRTWVG 456
           R+LNWNS+  IC++WVG
Sbjct: 63  RRLNWNSTNHICKSWVG 79


>ref|XP_002520893.1| Receptor protein kinase CLAVATA1 precursor, putative [Ricinus
           communis] gi|223540024|gb|EEF41602.1| Receptor protein
           kinase CLAVATA1 precursor, putative [Ricinus communis]
          Length = 581

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 35/61 (57%), Positives = 42/61 (68%)
 Frame = +1

Query: 274 MKPCSPFQLIASVFAIFVFLPQTFCDLNSDQQALLAFAAAVPHGRKLNWNSSTSICRTWV 453
           MK  S    +A +F I   +PQ   DLNSD+QALL FAAAVPH RKLNWN+S S+C +W 
Sbjct: 1   MKLQSSTSTLAFLFFILCIVPQIIADLNSDKQALLDFAAAVPHIRKLNWNTSISVCSSWF 60

Query: 454 G 456
           G
Sbjct: 61  G 61


>ref|XP_002864562.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297310397|gb|EFH40821.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 658

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 36/77 (46%), Positives = 49/77 (63%), Gaps = 5/77 (6%)
 Frame = +1

Query: 241 HIFSYRADRFLMKPCSPFQLIASVFAIFVFLPQTFC-----DLNSDQQALLAFAAAVPHG 405
           H   Y    F ++P   F  +++    F+ +  TFC     DLNSD+QALLAFAA+VPH 
Sbjct: 5   HFRIYVGPIFALRPSKGF--LSACLVSFLLVTTTFCSFAIADLNSDRQALLAFAASVPHL 62

Query: 406 RKLNWNSSTSICRTWVG 456
           R+LNWNS+  IC++WVG
Sbjct: 63  RRLNWNSTNHICKSWVG 79


>gb|ACA61611.1| hypothetical protein AP2_E06.2 [Arabidopsis lyrata subsp. petraea]
          Length = 658

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 36/77 (46%), Positives = 49/77 (63%), Gaps = 5/77 (6%)
 Frame = +1

Query: 241 HIFSYRADRFLMKPCSPFQLIASVFAIFVFLPQTFC-----DLNSDQQALLAFAAAVPHG 405
           H   Y    F ++P   F  +++    F+ +  TFC     DLNSD+QALLAFAA+VPH 
Sbjct: 5   HFQIYVGPIFALRPSMGF--LSACLVSFLLVTTTFCSFAIADLNSDRQALLAFAASVPHL 62

Query: 406 RKLNWNSSTSICRTWVG 456
           R+LNWNS+  IC++WVG
Sbjct: 63  RRLNWNSTNHICKSWVG 79


Top