BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00034884
         (1214 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003536719.1| PREDICTED: RNA-binding protein 39-like [Glyc...    71   6e-10
ref|NP_001189538.1| splicing factor, CC1-like protein [Arabidops...    69   2e-09
ref|XP_002886087.1| hypothetical protein ARALYDRAFT_480573 [Arab...    69   2e-09
gb|AAM20703.1| putative splicing factor [Arabidopsis thaliana]         69   2e-09
gb|AAM62839.1| putative splicing factor [Arabidopsis thaliana]         69   2e-09

>ref|XP_003536719.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
          Length = 597

 Score = 70.9 bits (172), Expect = 6e-10
 Identities = 47/196 (23%), Positives = 96/196 (48%), Gaps = 12/196 (6%)
 Frame = +1

Query: 349 KQKYVEAYIEASDPERDNRTVLYVKVDISTSLNAIDGYFSRAGQIRSIMISKDKIQRKLS 528
           K+K  EA    +DPERD RTV   ++ +      +  +FSRAG++R + +  D+  R+  
Sbjct: 205 KEKKEEATEPEADPERDQRTVFAYQISLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSK 264

Query: 529 --AEIEFNSFESVAVAVAMAVKDGKTNVCAKMASIHVDSFAIEETKLSDRGDSSIVDVFN 702
               IEF    SV +A+A++ +         +     +   ++ T     G + ++  ++
Sbjct: 265 GVGYIEFYDVMSVPMAIALSGQP-LLGQPVMVKPSEAEKNLVQSTTSVANGLTGLIGPYS 323

Query: 703 ---QKIHIGFDHIPMTVQWLEKIFQVFGVVQKIKI-------YWGYAILQFESIDGVHNA 852
              +K+++G  H+ +T   + ++F+ FG V+ +++         G+  +QF  ++   NA
Sbjct: 324 GGARKLYVGNLHVSITEADIRRVFEAFGQVELVQLPLDESGHCKGFGFVQFARLEDARNA 383

Query: 853 LRLNKQLKFSHKNVEV 900
             LN QL+   + ++V
Sbjct: 384 QSLNGQLEIGGRTIKV 399


>ref|NP_001189538.1| splicing factor, CC1-like protein [Arabidopsis thaliana]
           gi|330251466|gb|AEC06560.1| splicing factor, CC1-like
           protein [Arabidopsis thaliana]
          Length = 610

 Score = 69.3 bits (168), Expect = 2e-09
 Identities = 46/194 (23%), Positives = 96/194 (49%), Gaps = 10/194 (5%)
 Frame = +1

Query: 349 KQKYVEAYIEASDPERDNRTVLYVKVDISTSLNAIDGYFSRAGQIRSIMISKDKIQRKLS 528
           K K  +     +DPERD RTV   ++ +  +   +  +FSRAG++R + I  D+I R+  
Sbjct: 213 KDKKEDKVEPEADPERDQRTVFAYQIALRATERDVYEFFSRAGKVRDVRIIMDRISRRSR 272

Query: 529 AEIEFNSFESVAVAVAMAVKDGKTNVCAKMASIHVDSFAIEETKLSDRGDSSIVDVFN-- 702
                  +++++V +A+A+          M         + ++  +  G   ++  ++  
Sbjct: 273 GIGYVEFYDTMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTTAAAGAGGMLGPYSGG 332

Query: 703 -QKIHIGFDHIPMTVQWLEKIFQVFGVVQKIKI-------YWGYAILQFESIDGVHNALR 858
            +++++G  HI M+   L K+F+ FG V+ +++         G+  +QF  ++   NAL 
Sbjct: 333 ARRLYVGNLHINMSEDDLRKVFESFGSVELVQVPRDETGLCKGFGFVQFARLEDARNALN 392

Query: 859 LNKQLKFSHKNVEV 900
           LN QL+ + + ++V
Sbjct: 393 LNGQLEIAGRAIKV 406


>ref|XP_002886087.1| hypothetical protein ARALYDRAFT_480573 [Arabidopsis lyrata subsp.
           lyrata] gi|297331927|gb|EFH62346.1| hypothetical protein
           ARALYDRAFT_480573 [Arabidopsis lyrata subsp. lyrata]
          Length = 557

 Score = 69.3 bits (168), Expect = 2e-09
 Identities = 46/194 (23%), Positives = 96/194 (49%), Gaps = 10/194 (5%)
 Frame = +1

Query: 349 KQKYVEAYIEASDPERDNRTVLYVKVDISTSLNAIDGYFSRAGQIRSIMISKDKIQRKLS 528
           K K  +     +DPERD RTV   ++ +  +   +  +FSRAG++R + I  D+I R+  
Sbjct: 164 KDKKEDKVEPEADPERDQRTVFAYQIALRATERDVYEFFSRAGKVRDVRIIMDRISRRSR 223

Query: 529 AEIEFNSFESVAVAVAMAVKDGKTNVCAKMASIHVDSFAIEETKLSDRGDSSIVDVFN-- 702
                  +++++V +A+A+          M         + ++  +  G   ++  ++  
Sbjct: 224 GIGYVEFYDTMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTTAAAGAGGMLGPYSGG 283

Query: 703 -QKIHIGFDHIPMTVQWLEKIFQVFGVVQKIKI-------YWGYAILQFESIDGVHNALR 858
            +++++G  HI M+   L K+F+ FG V+ +++         G+  +QF  ++   NAL 
Sbjct: 284 ARRLYVGNLHINMSEDDLRKVFEPFGSVELVQVPRDETGLCKGFGFVQFARLEDARNALN 343

Query: 859 LNKQLKFSHKNVEV 900
           LN QL+ + + ++V
Sbjct: 344 LNGQLEIAGRAIKV 357


>gb|AAM20703.1| putative splicing factor [Arabidopsis thaliana]
          Length = 420

 Score = 69.3 bits (168), Expect = 2e-09
 Identities = 46/194 (23%), Positives = 96/194 (49%), Gaps = 10/194 (5%)
 Frame = +1

Query: 349 KQKYVEAYIEASDPERDNRTVLYVKVDISTSLNAIDGYFSRAGQIRSIMISKDKIQRKLS 528
           K K  +     +DPERD RTV   ++ +  +   +  +FSRAG++R + I  D+I R+  
Sbjct: 23  KDKKEDKVEPEADPERDQRTVFAYQIALRATERDVYEFFSRAGKVRDVRIIMDRISRRSR 82

Query: 529 AEIEFNSFESVAVAVAMAVKDGKTNVCAKMASIHVDSFAIEETKLSDRGDSSIVDVFN-- 702
                  +++++V +A+A+          M         + ++  +  G   ++  ++  
Sbjct: 83  GIGYVEFYDTMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTTAAAGAGGMLGPYSGG 142

Query: 703 -QKIHIGFDHIPMTVQWLEKIFQVFGVVQKIKI-------YWGYAILQFESIDGVHNALR 858
            +++++G  HI M+   L K+F+ FG V+ +++         G+  +QF  ++   NAL 
Sbjct: 143 ARRLYVGNLHINMSEDDLRKVFESFGSVELVQVPRDETGLCKGFGFVQFARLEDARNALN 202

Query: 859 LNKQLKFSHKNVEV 900
           LN QL+ + + ++V
Sbjct: 203 LNGQLEIAGRAIKV 216


>gb|AAM62839.1| putative splicing factor [Arabidopsis thaliana]
          Length = 560

 Score = 69.3 bits (168), Expect = 2e-09
 Identities = 46/194 (23%), Positives = 96/194 (49%), Gaps = 10/194 (5%)
 Frame = +1

Query: 349 KQKYVEAYIEASDPERDNRTVLYVKVDISTSLNAIDGYFSRAGQIRSIMISKDKIQRKLS 528
           K K  +     +DPERD RTV   ++ +  +   +  +FSRAG++R + I  D+I R+  
Sbjct: 164 KDKKEDKVEPEADPERDQRTVFAYQIALRATERDVYEFFSRAGKVRDVRIIMDRISRRSR 223

Query: 529 AEIEFNSFESVAVAVAMAVKDGKTNVCAKMASIHVDSFAIEETKLSDRGDSSIVDVFN-- 702
                  +++++V +A+A+          M         + ++  +  G   ++  ++  
Sbjct: 224 GIGYVEFYDTMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTTAAAGAGGMLGPYSGG 283

Query: 703 -QKIHIGFDHIPMTVQWLEKIFQVFGVVQKIKI-------YWGYAILQFESIDGVHNALR 858
            +++++G  HI M+   L K+F+ FG V+ +++         G+  +QF  ++   NAL 
Sbjct: 284 ARRLYVGNLHINMSEDDLRKVFESFGSVELVQVPRDETGLCKGFGFVQFARLEDARNALN 343

Query: 859 LNKQLKFSHKNVEV 900
           LN QL+ + + ++V
Sbjct: 344 LNGQLEIAGRAIKV 357