BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00034883
         (405 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272556.1| PREDICTED: pentatricopeptide repeat-containi...   180   1e-43
ref|XP_003539071.1| PREDICTED: pentatricopeptide repeat-containi...   177   8e-43
ref|XP_002874971.1| pentatricopeptide repeat-containing protein ...   166   2e-39
ref|XP_002515124.1| pentatricopeptide repeat-containing protein,...   166   2e-39
ref|XP_003621545.1| Pentatricopeptide repeat-containing protein ...   166   2e-39

>ref|XP_002272556.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01570
           [Vitis vinifera]
          Length = 792

 Score =  180 bits (456), Expect = 1e-43
 Identities = 83/119 (69%), Positives = 101/119 (84%)
 Frame = +1

Query: 1   KKGQFVDAITYSIVIMHVSREGQLEEALELVKEMEVRGFLVDLVTITSLLIALYKHDRWD 180
           KKG+FVD ITYSIV++ + REGQLEEAL+LV+EME RGF+VDLVTITSLLI  +K  RWD
Sbjct: 405 KKGKFVDGITYSIVVLQLCREGQLEEALQLVEEMEARGFVVDLVTITSLLIGFHKQGRWD 464

Query: 181 WTDRLMKHVRGGNIMPAVLKWKANMEASVKGPQSREKDYTPIFPSKGKFSDILQFVSSA 357
           WT+RLMKH+R GN++P VL WKANMEA +K PQSR KDYTP+FPS+G  S+I+  +SSA
Sbjct: 465 WTERLMKHIRDGNLVPNVLNWKANMEAYMKAPQSRRKDYTPMFPSEGNLSEIMSLISSA 523


>ref|XP_003539071.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g01570-like [Glycine max]
          Length = 768

 Score =  177 bits (449), Expect = 8e-43
 Identities = 82/130 (63%), Positives = 107/130 (82%)
 Frame = +1

Query: 1   KKGQFVDAITYSIVIMHVSREGQLEEALELVKEMEVRGFLVDLVTITSLLIALYKHDRWD 180
           KKGQFVD ITYSIV++ + +EGQLEEAL+LV+EME RGF+VDLVTITSLLI++++H RWD
Sbjct: 383 KKGQFVDGITYSIVVLQLCKEGQLEEALQLVEEMESRGFVVDLVTITSLLISIHRHGRWD 442

Query: 181 WTDRLMKHVRGGNIMPAVLKWKANMEASVKGPQSREKDYTPIFPSKGKFSDILQFVSSAT 360
           WTDRLMKH+R G++  +VLKWKA MEAS+K P  ++KDY+P+FPSKG F DI+ F++ A 
Sbjct: 443 WTDRLMKHIREGDLALSVLKWKAGMEASMKNPPGKKKDYSPLFPSKGDFIDIINFMTCAQ 502

Query: 361 GGNGVDLGIE 390
               ++ G E
Sbjct: 503 DTTNINDGEE 512


>ref|XP_002874971.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297320808|gb|EFH51230.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 802

 Score =  166 bits (420), Expect = 2e-39
 Identities = 77/122 (63%), Positives = 98/122 (80%)
 Frame = +1

Query: 1   KKGQFVDAITYSIVIMHVSREGQLEEALELVKEMEVRGFLVDLVTITSLLIALYKHDRWD 180
           KKGQFVDAIT+SIV++ + REG+LEEA++LV+EME RGF VDLVTI+SLLI  +K  RWD
Sbjct: 420 KKGQFVDAITFSIVVLQLCREGKLEEAVKLVEEMETRGFTVDLVTISSLLIGFHKQGRWD 479

Query: 181 WTDRLMKHVRGGNIMPAVLKWKANMEASVKGPQSREKDYTPIFPSKGKFSDILQFVSSAT 360
           W ++LMKHVR GN++P VL+W A +EAS+K PQ ++KDYTP+FPSKG F DI+  V    
Sbjct: 480 WKEKLMKHVREGNLVPNVLRWNAGVEASLKRPQRKDKDYTPMFPSKGSFLDIMSMVGLED 539

Query: 361 GG 366
            G
Sbjct: 540 DG 541


>ref|XP_002515124.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545604|gb|EEF47108.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 898

 Score =  166 bits (420), Expect = 2e-39
 Identities = 77/116 (66%), Positives = 98/116 (84%)
 Frame = +1

Query: 1   KKGQFVDAITYSIVIMHVSREGQLEEALELVKEMEVRGFLVDLVTITSLLIALYKHDRWD 180
           KKG+FVDAITYSI+++ + REGQL+EAL LV+EME RGF+VDLVTITSLLIA +K  RWD
Sbjct: 433 KKGKFVDAITYSIIVLLLCREGQLKEALSLVEEMEERGFVVDLVTITSLLIAFHKQGRWD 492

Query: 181 WTDRLMKHVRGGNIMPAVLKWKANMEASVKGPQSREKDYTPIFPSKGKFSDILQFV 348
           WT++LMKHVR GN++P VL W+A+MEAS+K P+SR KDYTP+F S G  S+I+  +
Sbjct: 493 WTEKLMKHVRDGNLVPNVLNWQADMEASLKNPRSRRKDYTPMFLSNGSLSEIINII 548


>ref|XP_003621545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|87241489|gb|ABD33347.1| Pentatricopeptide repeat
           [Medicago truncatula] gi|355496560|gb|AES77763.1|
           Pentatricopeptide repeat-containing protein [Medicago
           truncatula]
          Length = 791

 Score =  166 bits (419), Expect = 2e-39
 Identities = 76/117 (64%), Positives = 98/117 (83%)
 Frame = +1

Query: 1   KKGQFVDAITYSIVIMHVSREGQLEEALELVKEMEVRGFLVDLVTITSLLIALYKHDRWD 180
           KKGQFVD ITYSIV++ + +EG LEEALELV+EME RGF VDLVTITSLLI ++K+ RW+
Sbjct: 408 KKGQFVDGITYSIVVLQLCKEGLLEEALELVEEMEARGFSVDLVTITSLLIGIHKYGRWE 467

Query: 181 WTDRLMKHVRGGNIMPAVLKWKANMEASVKGPQSREKDYTPIFPSKGKFSDILQFVS 351
           WTDRL+KHVR G+++P VL+WKA MEAS+    S+EKDY+ +FPSKG F +I+ F++
Sbjct: 468 WTDRLIKHVREGDLLPGVLRWKAGMEASINNFHSKEKDYSSMFPSKGGFCEIMSFIT 524