BLASTX nr result

ID: Cnidium21_contig00034877 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00034877
         (721 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635569.1| PREDICTED: pentatricopeptide repeat-containi...   270   2e-70
emb|CBI25911.3| unnamed protein product [Vitis vinifera]              270   2e-70
ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containi...   268   1e-69
ref|XP_002324099.1| predicted protein [Populus trichocarpa] gi|2...   265   5e-69
ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containi...   256   4e-66

>ref|XP_003635569.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like, partial [Vitis vinifera]
          Length = 287

 Score =  270 bits (691), Expect = 2e-70
 Identities = 126/180 (70%), Positives = 152/180 (84%)
 Frame = -2

Query: 720 EACIQIEPDDSATYLTLSSIYATAGEWDEVAKLGKVMSDKGLVMKPGISWTEIKGKVHTF 541
           EA  +IEP++ ATY TL++IYATAG W  VA++ KVM  +G+V KPG+SW EIK +VH F
Sbjct: 108 EALFEIEPENPATYTTLANIYATAGLWGGVAEVRKVMDARGVVKKPGLSWIEIKREVHVF 167

Query: 540 KVGDTSHPYTTEIYEYLSELLRRMKEEGYKPVTDYVLHDVEEEQKEQNISYHSEKLAVAF 361
            VGDTSH  + EI+E+L +L +RMKEEGY P T++VLHDVEEEQKEQN+SYHSEKLAVAF
Sbjct: 168 LVGDTSHAKSKEIHEFLGKLSKRMKEEGYVPDTNFVLHDVEEEQKEQNLSYHSEKLAVAF 227

Query: 360 GIIATPRGTTIKIFKNLRSCVDCHTSFKYISKIVERKIIVRDSTRFHCFEGGSCSCKDYW 181
           GII+TP GT IK+FKNLR+CVDCHT+ K+ISKI +RKIIVRDS RFHCFE GSCSC+DYW
Sbjct: 228 GIISTPAGTLIKVFKNLRTCVDCHTAIKFISKIAKRKIIVRDSNRFHCFEDGSCSCRDYW 287


>emb|CBI25911.3| unnamed protein product [Vitis vinifera]
          Length = 288

 Score =  270 bits (691), Expect = 2e-70
 Identities = 126/180 (70%), Positives = 152/180 (84%)
 Frame = -2

Query: 720 EACIQIEPDDSATYLTLSSIYATAGEWDEVAKLGKVMSDKGLVMKPGISWTEIKGKVHTF 541
           EA  +IEP++ ATY TL++IYATAG W  VA++ KVM  +G+V KPG+SW EIK +VH F
Sbjct: 109 EALFEIEPENPATYTTLANIYATAGLWGGVAEVRKVMDARGVVKKPGLSWIEIKREVHVF 168

Query: 540 KVGDTSHPYTTEIYEYLSELLRRMKEEGYKPVTDYVLHDVEEEQKEQNISYHSEKLAVAF 361
            VGDTSH  + EI+E+L +L +RMKEEGY P T++VLHDVEEEQKEQN+SYHSEKLAVAF
Sbjct: 169 LVGDTSHAKSKEIHEFLGKLSKRMKEEGYVPDTNFVLHDVEEEQKEQNLSYHSEKLAVAF 228

Query: 360 GIIATPRGTTIKIFKNLRSCVDCHTSFKYISKIVERKIIVRDSTRFHCFEGGSCSCKDYW 181
           GII+TP GT IK+FKNLR+CVDCHT+ K+ISKI +RKIIVRDS RFHCFE GSCSC+DYW
Sbjct: 229 GIISTPAGTLIKVFKNLRTCVDCHTAIKFISKIAKRKIIVRDSNRFHCFEDGSCSCRDYW 288


>ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37170-like
            [Glycine max]
          Length = 693

 Score =  268 bits (684), Expect = 1e-69
 Identities = 124/180 (68%), Positives = 150/180 (83%)
 Frame = -2

Query: 720  EACIQIEPDDSATYLTLSSIYATAGEWDEVAKLGKVMSDKGLVMKPGISWTEIKGKVHTF 541
            +A  +IEP++ ATY+TL++IYA AG W EVA + K M + G+V KPG SW EIK +VH F
Sbjct: 514  KALYEIEPENPATYITLANIYANAGLWSEVANVRKDMDNMGIVKKPGKSWIEIKRQVHVF 573

Query: 540  KVGDTSHPYTTEIYEYLSELLRRMKEEGYKPVTDYVLHDVEEEQKEQNISYHSEKLAVAF 361
             VGDTSHP T++I+E+L EL +++KEEGY P T++VLHDVEEEQKEQN+ YHSEKLAV F
Sbjct: 574  LVGDTSHPKTSDIHEFLGELSKKIKEEGYVPDTNFVLHDVEEEQKEQNLVYHSEKLAVVF 633

Query: 360  GIIATPRGTTIKIFKNLRSCVDCHTSFKYISKIVERKIIVRDSTRFHCFEGGSCSCKDYW 181
            GII+TP GT IK+FKNLR+CVDCHT+ KYISKIV+RKI VRDS RFHCFE GSCSCKDYW
Sbjct: 634  GIISTPPGTPIKVFKNLRTCVDCHTAIKYISKIVQRKITVRDSNRFHCFEDGSCSCKDYW 693


>ref|XP_002324099.1| predicted protein [Populus trichocarpa] gi|222867101|gb|EEF04232.1|
            predicted protein [Populus trichocarpa]
          Length = 676

 Score =  265 bits (678), Expect = 5e-69
 Identities = 123/180 (68%), Positives = 148/180 (82%)
 Frame = -2

Query: 720  EACIQIEPDDSATYLTLSSIYATAGEWDEVAKLGKVMSDKGLVMKPGISWTEIKGKVHTF 541
            EA  +IEP++ ATY+TL++IYATAG W EVAK+ K M D+G+V KPG+SW  IK  VH F
Sbjct: 497  EALFEIEPENPATYVTLANIYATAGMWSEVAKIRKTMDDRGVVKKPGLSWIAIKRDVHVF 556

Query: 540  KVGDTSHPYTTEIYEYLSELLRRMKEEGYKPVTDYVLHDVEEEQKEQNISYHSEKLAVAF 361
             VGD SHP + EI E+L +L +RMKEEG+ P T++VLHDVE+EQKEQN+SYHSEKLAVAF
Sbjct: 557  LVGDDSHPKSKEINEFLGKLSKRMKEEGFVPDTNFVLHDVEDEQKEQNLSYHSEKLAVAF 616

Query: 360  GIIATPRGTTIKIFKNLRSCVDCHTSFKYISKIVERKIIVRDSTRFHCFEGGSCSCKDYW 181
            GII+TP GT IK+FKNLR+CVDCHT+ K+ISKI  RKIIVRDS RFH FE G CSC+DYW
Sbjct: 617  GIISTPEGTPIKVFKNLRTCVDCHTAIKFISKITNRKIIVRDSNRFHFFEDGHCSCRDYW 676


>ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37170-like
            [Cucumis sativus] gi|449484855|ref|XP_004156999.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At4g37170-like [Cucumis sativus]
          Length = 724

 Score =  256 bits (653), Expect = 4e-66
 Identities = 119/180 (66%), Positives = 146/180 (81%)
 Frame = -2

Query: 720  EACIQIEPDDSATYLTLSSIYATAGEWDEVAKLGKVMSDKGLVMKPGISWTEIKGKVHTF 541
            ++  +IEP++ ATY+TL++IYA+AG   E A + + M  +G+V KPG+SW EI+ +VH F
Sbjct: 545  KSLFEIEPENPATYVTLANIYASAGMRAEEANIRETMDSRGIVKKPGMSWIEIRREVHVF 604

Query: 540  KVGDTSHPYTTEIYEYLSELLRRMKEEGYKPVTDYVLHDVEEEQKEQNISYHSEKLAVAF 361
             VGD SHP + EI EYLSEL +RMKE GY P T++VLHDVE EQKE+N+SYHSEKLAVAF
Sbjct: 605  SVGDNSHPKSKEILEYLSELSKRMKEVGYVPDTNFVLHDVELEQKEENLSYHSEKLAVAF 664

Query: 360  GIIATPRGTTIKIFKNLRSCVDCHTSFKYISKIVERKIIVRDSTRFHCFEGGSCSCKDYW 181
            GII+TP GT IK+FKNLR+CVDCH + K+IS I  RKIIVRDS RFHCFEGGSCSCKDYW
Sbjct: 665  GIISTPSGTPIKVFKNLRTCVDCHNAIKFISNITGRKIIVRDSNRFHCFEGGSCSCKDYW 724