BLASTX nr result

ID: Cnidium21_contig00034858 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00034858
         (372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632691.1| PREDICTED: condensin complex subunit 1-like ...   208   3e-52
emb|CBI30096.3| unnamed protein product [Vitis vinifera]              208   3e-52
ref|XP_002308898.1| condensin complex components subunit [Populu...   196   1e-48
ref|XP_002529162.1| condensin, putative [Ricinus communis] gi|22...   191   4e-47
ref|XP_004166468.1| PREDICTED: condensin complex subunit 1-like,...   191   7e-47

>ref|XP_003632691.1| PREDICTED: condensin complex subunit 1-like [Vitis vinifera]
          Length = 1346

 Score =  208 bits (530), Expect = 3e-52
 Identities = 103/120 (85%), Positives = 108/120 (90%)
 Frame = -1

Query: 372 CRDVSAYTRSRVLQVWAEVCEEHAVSIGLWNEVAAVAAGRLEDKSAIVRKSALNLLIMML 193
           CRDVSAYTRSRVLQVW E+CEEH+VSIG+WNEVAAVAAGRLEDKSAIVRKSALNLLIMML
Sbjct: 380 CRDVSAYTRSRVLQVWGELCEEHSVSIGMWNEVAAVAAGRLEDKSAIVRKSALNLLIMML 439

Query: 192 QHNPFGPQLRIASFEATLEQYRKKLKELVPDSPSESVLDGLPLDNDDCNGDGEVDDPRAE 13
           QHNPFGPQLRIASFEATLEQY+KKL EL P+  SESVLDGLP D D CNGDGEVD    E
Sbjct: 440 QHNPFGPQLRIASFEATLEQYKKKLNELQPNLASESVLDGLPSDGDTCNGDGEVDSGNEE 499


>emb|CBI30096.3| unnamed protein product [Vitis vinifera]
          Length = 1290

 Score =  208 bits (530), Expect = 3e-52
 Identities = 103/120 (85%), Positives = 108/120 (90%)
 Frame = -1

Query: 372 CRDVSAYTRSRVLQVWAEVCEEHAVSIGLWNEVAAVAAGRLEDKSAIVRKSALNLLIMML 193
           CRDVSAYTRSRVLQVW E+CEEH+VSIG+WNEVAAVAAGRLEDKSAIVRKSALNLLIMML
Sbjct: 380 CRDVSAYTRSRVLQVWGELCEEHSVSIGMWNEVAAVAAGRLEDKSAIVRKSALNLLIMML 439

Query: 192 QHNPFGPQLRIASFEATLEQYRKKLKELVPDSPSESVLDGLPLDNDDCNGDGEVDDPRAE 13
           QHNPFGPQLRIASFEATLEQY+KKL EL P+  SESVLDGLP D D CNGDGEVD    E
Sbjct: 440 QHNPFGPQLRIASFEATLEQYKKKLNELQPNLASESVLDGLPSDGDTCNGDGEVDSGNEE 499


>ref|XP_002308898.1| condensin complex components subunit [Populus trichocarpa]
           gi|222854874|gb|EEE92421.1| condensin complex components
           subunit [Populus trichocarpa]
          Length = 1334

 Score =  196 bits (499), Expect = 1e-48
 Identities = 101/124 (81%), Positives = 108/124 (87%)
 Frame = -1

Query: 372 CRDVSAYTRSRVLQVWAEVCEEHAVSIGLWNEVAAVAAGRLEDKSAIVRKSALNLLIMML 193
           CRDVSAYTRSRVLQVWAE+CEEH+VSIGLWNEVAAVAAGRLEDKSAIVRK+ALNLLIMML
Sbjct: 388 CRDVSAYTRSRVLQVWAELCEEHSVSIGLWNEVAAVAAGRLEDKSAIVRKAALNLLIMML 447

Query: 192 QHNPFGPQLRIASFEATLEQYRKKLKELVPDSPSESVLDGLPLDNDDCNGDGEVDDPRAE 13
           QHNPFGPQLRIASF+ATLEQY KKL EL PD  +ESVLDGL  DN+  +G GEVDD   E
Sbjct: 448 QHNPFGPQLRIASFQATLEQYNKKLNELEPDKSAESVLDGLQSDNETYDG-GEVDDVNME 506

Query: 12  SRPK 1
              K
Sbjct: 507 EPVK 510


>ref|XP_002529162.1| condensin, putative [Ricinus communis] gi|223531386|gb|EEF33221.1|
           condensin, putative [Ricinus communis]
          Length = 1346

 Score =  191 bits (486), Expect = 4e-47
 Identities = 94/120 (78%), Positives = 106/120 (88%)
 Frame = -1

Query: 372 CRDVSAYTRSRVLQVWAEVCEEHAVSIGLWNEVAAVAAGRLEDKSAIVRKSALNLLIMML 193
           CRDVSAYTRSRVLQVWAE+CEEH+VS+GLWNEVAAVAAGRLEDK+A+VRK+ALNLLIMML
Sbjct: 392 CRDVSAYTRSRVLQVWAELCEEHSVSMGLWNEVAAVAAGRLEDKTAMVRKAALNLLIMML 451

Query: 192 QHNPFGPQLRIASFEATLEQYRKKLKELVPDSPSESVLDGLPLDNDDCNGDGEVDDPRAE 13
           QHNPFGPQLRIASFEATLEQY+KKL EL PD  +++  DGL  DND  +G  EVD+  AE
Sbjct: 452 QHNPFGPQLRIASFEATLEQYKKKLNELEPDESAQNARDGLKSDNDASDGGDEVDNVNAE 511


>ref|XP_004166468.1| PREDICTED: condensin complex subunit 1-like, partial [Cucumis
           sativus]
          Length = 1133

 Score =  191 bits (484), Expect = 7e-47
 Identities = 95/116 (81%), Positives = 102/116 (87%)
 Frame = -1

Query: 372 CRDVSAYTRSRVLQVWAEVCEEHAVSIGLWNEVAAVAAGRLEDKSAIVRKSALNLLIMML 193
           CRDVSAYTRSRVLQVWAE+CEEH+VSIGLWNEVAAVAAGRLEDKSAIVRKSAL LLI ML
Sbjct: 381 CRDVSAYTRSRVLQVWAELCEEHSVSIGLWNEVAAVAAGRLEDKSAIVRKSALQLLISML 440

Query: 192 QHNPFGPQLRIASFEATLEQYRKKLKELVPDSPSESVLDGLPLDNDDCNGDGEVDD 25
           QHNPFGPQLR+ SFEATLEQY+KKL EL P+  SE+V  G P D D  NGDGEVD+
Sbjct: 441 QHNPFGPQLRVVSFEATLEQYKKKLDELEPNKSSENVDGGSPFDGDIFNGDGEVDN 496


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