BLASTX nr result

ID: Cnidium21_contig00034855 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00034855
         (877 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002893847.1| LOB domain protein 4 [Arabidopsis lyrata sub...   177   2e-42
ref|NP_174417.1| LOB domain-containing protein 4 [Arabidopsis th...   176   5e-42
ref|NP_001236751.1| uncharacterized protein LOC100306560 [Glycin...   176   6e-42
ref|XP_002297935.1| predicted protein [Populus trichocarpa] gi|2...   175   1e-41
ref|XP_003529442.1| PREDICTED: LOB domain-containing protein 4-l...   174   2e-41

>ref|XP_002893847.1| LOB domain protein 4 [Arabidopsis lyrata subsp. lyrata]
           gi|297339689|gb|EFH70106.1| LOB domain protein 4
           [Arabidopsis lyrata subsp. lyrata]
          Length = 172

 Score =  177 bits (450), Expect = 2e-42
 Identities = 94/161 (58%), Positives = 107/161 (66%), Gaps = 6/161 (3%)
 Frame = -2

Query: 636 PCAACKLLRRKCAAGDCVFAPHFPPDDPSKFANVHKVFGASNVNKMLQEVPEQQRGDAVS 457
           PCAACKLLRR+CA  DCVF+P+FP D+P KFANVH+VFGASNVNKMLQE+P  QRGDAVS
Sbjct: 13  PCAACKLLRRRCAQ-DCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVS 71

Query: 456 SMVYEANARVRDPVYGCVGAISCXXXXXXXXXXXXXXXXXQVLHLRV-HVAATAGQALCA 280
           SMVYEANARVRDPVYGCVGAIS                  +V+HLRV H     G  LC 
Sbjct: 72  SMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRHSTNFPGHGLCP 131

Query: 279 SSCGSPMITMSQQIKPSSNMSM-----VVDQGSLGDMTWSC 172
            S  S     S+Q+ P  N  M     +VD+ SLG+  WSC
Sbjct: 132 DSPSSSGSPSSKQVSPQDNKGMFSHMDIVDEASLGESMWSC 172


>ref|NP_174417.1| LOB domain-containing protein 4 [Arabidopsis thaliana]
           gi|29428037|sp|Q9SHE9.1|LBD4_ARATH RecName: Full=LOB
           domain-containing protein 4; AltName: Full=ASYMMETRIC
           LEAVES 2-like protein 6; Short=AS2-like protein 6
           gi|6692123|gb|AAF24588.1|AC007654_4 T19E23.11
           [Arabidopsis thaliana] gi|50253474|gb|AAT71939.1|
           At1g31320 [Arabidopsis thaliana]
           gi|51972120|gb|AAU15164.1| At1g31320 [Arabidopsis
           thaliana] gi|219807088|dbj|BAH10550.1| ASYMMETRIC
           LEAVES2-like 6 protein [Arabidopsis thaliana]
           gi|332193220|gb|AEE31341.1| LOB domain-containing
           protein 4 [Arabidopsis thaliana]
          Length = 172

 Score =  176 bits (447), Expect = 5e-42
 Identities = 93/161 (57%), Positives = 107/161 (66%), Gaps = 6/161 (3%)
 Frame = -2

Query: 636 PCAACKLLRRKCAAGDCVFAPHFPPDDPSKFANVHKVFGASNVNKMLQEVPEQQRGDAVS 457
           PCAACKLLRR+CA  DCVF+P+FP D+P KFANVH+VFGASNVNKMLQE+P  QRGDAVS
Sbjct: 13  PCAACKLLRRRCAQ-DCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVS 71

Query: 456 SMVYEANARVRDPVYGCVGAISCXXXXXXXXXXXXXXXXXQVLHLRVHVAAT-AGQALCA 280
           SMVYEANARVRDPVYGCVGAIS                  +V+HLRV  +    G  LC 
Sbjct: 72  SMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQSTNFPGHGLCP 131

Query: 279 SSCGSPMITMSQQIKPSSNMSM-----VVDQGSLGDMTWSC 172
            S  S     S+Q+ P  N  M     +VD+ SLG+  WSC
Sbjct: 132 DSPSSSGSPSSKQVSPQDNKGMFSHMDIVDEASLGESMWSC 172


>ref|NP_001236751.1| uncharacterized protein LOC100306560 [Glycine max]
           gi|255628883|gb|ACU14786.1| unknown [Glycine max]
          Length = 159

 Score =  176 bits (446), Expect = 6e-42
 Identities = 93/153 (60%), Positives = 104/153 (67%)
 Frame = -2

Query: 636 PCAACKLLRRKCAAGDCVFAPHFPPDDPSKFANVHKVFGASNVNKMLQEVPEQQRGDAVS 457
           PCAACKLLRR+CA  DCVFAP+FP D+P KFANVHKVFGASNVNKMLQ++PE QRGDAVS
Sbjct: 13  PCAACKLLRRRCAQ-DCVFAPYFPADEPQKFANVHKVFGASNVNKMLQDLPEHQRGDAVS 71

Query: 456 SMVYEANARVRDPVYGCVGAISCXXXXXXXXXXXXXXXXXQVLHLRVHVAATAGQALCAS 277
           SMVYEANARVRDPVYGCVGAIS                  + +HLRV  AA+       +
Sbjct: 72  SMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLAVAQAEAVHLRVRQAASLYSPTSPT 131

Query: 276 SCGSPMITMSQQIKPSSNMSMVVDQGSLGDMTW 178
           + GSP      Q KP  +M MVVDQ   GD  W
Sbjct: 132 NSGSP-----SQAKPIFDMDMVVDQTPYGDSIW 159


>ref|XP_002297935.1| predicted protein [Populus trichocarpa] gi|222845193|gb|EEE82740.1|
           predicted protein [Populus trichocarpa]
          Length = 170

 Score =  175 bits (443), Expect = 1e-41
 Identities = 97/160 (60%), Positives = 107/160 (66%), Gaps = 5/160 (3%)
 Frame = -2

Query: 636 PCAACKLLRRKCAAGDCVFAPHFPPDDPSKFANVHKVFGASNVNKMLQEVPEQQRGDAVS 457
           PCAACKLLRR+CA  DCVFAP+FP D+P KFANVHKVFGASNVNKMLQE+P  QRGDAVS
Sbjct: 13  PCAACKLLRRRCAQ-DCVFAPYFPADEPQKFANVHKVFGASNVNKMLQELPVHQRGDAVS 71

Query: 456 SMVYEANARVRDPVYGCVGAISCXXXXXXXXXXXXXXXXXQVLHLRVHVAATAG----QA 289
           SMVYEANARVRDPVYGCVGAIS                  +V+HLRV   AT        
Sbjct: 72  SMVYEANARVRDPVYGCVGAISSLQQQIDALQTQLALAQAEVVHLRVRQTATLSNHGLSP 131

Query: 288 LCASSCGSPMI-TMSQQIKPSSNMSMVVDQGSLGDMTWSC 172
              S+ GSP    M  Q+KP  +M M VD  SLG+  WSC
Sbjct: 132 ASPSNSGSPSSRLMGSQMKPMFDMDM-VDHTSLGESMWSC 170


>ref|XP_003529442.1| PREDICTED: LOB domain-containing protein 4-like [Glycine max]
          Length = 159

 Score =  174 bits (441), Expect = 2e-41
 Identities = 92/153 (60%), Positives = 103/153 (67%)
 Frame = -2

Query: 636 PCAACKLLRRKCAAGDCVFAPHFPPDDPSKFANVHKVFGASNVNKMLQEVPEQQRGDAVS 457
           PCAACKLLRR+CA  DCVFAP+FP D+P KFANVHKVFGASNVNKMLQ++ E QRGDAVS
Sbjct: 13  PCAACKLLRRRCAQ-DCVFAPYFPADEPQKFANVHKVFGASNVNKMLQDLAEHQRGDAVS 71

Query: 456 SMVYEANARVRDPVYGCVGAISCXXXXXXXXXXXXXXXXXQVLHLRVHVAATAGQALCAS 277
           SMVYEANARVRDPVYGCVGAIS                  + +HLRV   A+       +
Sbjct: 72  SMVYEANARVRDPVYGCVGAISSLQQQIDVLQTQLAVAQAEAVHLRVRQTASLYSPTSPT 131

Query: 276 SCGSPMITMSQQIKPSSNMSMVVDQGSLGDMTW 178
           + GSP      Q KP  +M MVVDQ S GD  W
Sbjct: 132 NSGSP-----SQAKPIFDMDMVVDQNSYGDSMW 159


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