BLASTX nr result

ID: Cnidium21_contig00034840 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00034840
         (610 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD99219.1| polypeptide with a gag-like domain [Petunia x hy...    58   2e-06
gb|AFN53681.1| gag protein [Linum usitatissimum]                       57   3e-06
emb|CAN79868.1| hypothetical protein VITISV_011481 [Vitis vinifera]    56   6e-06
ref|XP_002520061.1| conserved hypothetical protein [Ricinus comm...    55   8e-06
emb|CAN66188.1| hypothetical protein VITISV_006046 [Vitis vinifera]    55   8e-06

>dbj|BAD99219.1| polypeptide with a gag-like domain [Petunia x hybrida]
          Length = 463

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 26/56 (46%), Positives = 35/56 (62%)
 Frame = +1

Query: 439 MLDCHHPYYLHPSDSLGMQFTTVVLTQSNYNQWHRSIEIALSSKLKLGFVDGSYTK 606
           +LD +HPYYL  SD+ GM         S+Y  W R + I+LS+K KLGF+ G+Y K
Sbjct: 30  VLDINHPYYLASSDAPGMNLINTSFDGSSYGNWKRGVLISLSAKNKLGFITGAYKK 85


>gb|AFN53681.1| gag protein [Linum usitatissimum]
          Length = 375

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 22/53 (41%), Positives = 36/53 (67%)
 Frame = +1

Query: 439 MLDCHHPYYLHPSDSLGMQFTTVVLTQSNYNQWHRSIEIALSSKLKLGFVDGS 597
           +LD  +P+Y+HPS+  G    + +LT+ NY++W  +I + L  K K+GFVDG+
Sbjct: 33  ILDITNPFYIHPSEHWGQNLVSTLLTEYNYSKWSMAISMVLDGKNKIGFVDGT 85


>emb|CAN79868.1| hypothetical protein VITISV_011481 [Vitis vinifera]
          Length = 154

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 24/56 (42%), Positives = 35/56 (62%)
 Frame = +1

Query: 439 MLDCHHPYYLHPSDSLGMQFTTVVLTQSNYNQWHRSIEIALSSKLKLGFVDGSYTK 606
           M++   P YLHPSD+ G   TT V    NY+ W ++++ AL +K KLG +DG+  K
Sbjct: 11  MIEPSSPLYLHPSDNPGATITTCVFNGENYDMWEKAVKNALRAKNKLGIIDGTVNK 66


>ref|XP_002520061.1| conserved hypothetical protein [Ricinus communis]
           gi|223540825|gb|EEF42385.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 199

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 25/47 (53%), Positives = 31/47 (65%)
 Frame = +1

Query: 457 PYYLHPSDSLGMQFTTVVLTQSNYNQWHRSIEIALSSKLKLGFVDGS 597
           PY LHPSD LG+ F T   T+ N+  W  S+E AL +K K GF+DGS
Sbjct: 29  PYILHPSDHLGLVFVTTPSTRENFASWKNSMETALYAKSKGGFIDGS 75


>emb|CAN66188.1| hypothetical protein VITISV_006046 [Vitis vinifera]
          Length = 225

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 27/65 (41%), Positives = 40/65 (61%)
 Frame = +1

Query: 409 VMVGYTSLSTMLDCHHPYYLHPSDSLGMQFTTVVLTQSNYNQWHRSIEIALSSKLKLGFV 588
           V++   S    LD  +PY+LH SD  GM   +  L   NY+ W R++ I+L++K KLGF+
Sbjct: 10  VLLQQPSNGGKLDAANPYFLHHSDHPGMVLVSKPLNGENYSTWCRAMTISLNAKSKLGFI 69

Query: 589 DGSYT 603
           DG+ T
Sbjct: 70  DGTTT 74


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