BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00034838
         (325 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF63108.1|AC006423_9 Hypothetical protein [Arabidopsis thali...   108   6e-22
gb|AAF79692.1|AC022314_33 F9C16.1 [Arabidopsis thaliana]              108   6e-22
gb|AEJ07955.1| putative polyprotein [Sorghum propinquum]              102   3e-20
gb|ABB47203.2| retrotransposon protein, putative, unclassified [...   102   3e-20
gb|AAM74347.1|AC115686_14 Putative retroelement [Oryza sativa Ja...   102   3e-20

>gb|AAF63108.1|AC006423_9 Hypothetical protein [Arabidopsis thaliana]
          Length = 474

 Score =  108 bits (269), Expect = 6e-22
 Identities = 55/106 (51%), Positives = 68/106 (64%)
 Frame = -2

Query: 321 IPILGHGHTNLPFPHPPLNLSNVLHTPQLVKNLIYVRRFTTDNNVSIEFDPFGFSVKDIR 142
           IP+   G   +     PL L NVL TP ++KNL+ VRRFT DN  SIEFDPFGFS+KD+R
Sbjct: 320 IPVTATGSLFIANKPRPLTLHNVLVTPDIIKNLVSVRRFTKDNKCSIEFDPFGFSIKDLR 379

Query: 141 TGTPIMRCDSTGDLYPVHTTPHYSITFPSTFAAISPLLWHNRLGHP 4
           T   ++R DS+GDLYPV    + +    STF A S  +WH RL HP
Sbjct: 380 TKRTLLRNDSSGDLYPVFPAFNKTSAPASTFLAQSSDIWHRRLPHP 425


>gb|AAF79692.1|AC022314_33 F9C16.1 [Arabidopsis thaliana]
          Length = 820

 Score =  108 bits (269), Expect = 6e-22
 Identities = 55/106 (51%), Positives = 68/106 (64%)
 Frame = -2

Query: 321 IPILGHGHTNLPFPHPPLNLSNVLHTPQLVKNLIYVRRFTTDNNVSIEFDPFGFSVKDIR 142
           IP+   G   +     PL L NVL TP ++KNL+ VRRFT DN  SIEFDPFGFS+KD+R
Sbjct: 316 IPVTATGSLFIANKPRPLTLHNVLVTPDIIKNLVSVRRFTKDNKCSIEFDPFGFSIKDLR 375

Query: 141 TGTPIMRCDSTGDLYPVHTTPHYSITFPSTFAAISPLLWHNRLGHP 4
           T   ++R DS+GDLYPV    + +    STF A S  +WH RL HP
Sbjct: 376 TKRTLLRNDSSGDLYPVFPAFNKTSAPASTFLAQSSDIWHRRLPHP 421


>gb|AEJ07955.1| putative polyprotein [Sorghum propinquum]
          Length = 826

 Score =  102 bits (254), Expect = 3e-20
 Identities = 53/107 (49%), Positives = 65/107 (60%)
 Frame = -2

Query: 321 IPILGHGHTNLPFPHPPLNLSNVLHTPQLVKNLIYVRRFTTDNNVSIEFDPFGFSVKDIR 142
           +P+   G     FPH  L L+ VL +P ++KNLI +RRFTTDNN  IEFDPFG SVKD++
Sbjct: 501 LPVTTIGSRIFSFPHRNLVLNKVLVSPHIIKNLISIRRFTTDNNCFIEFDPFGLSVKDLQ 560

Query: 141 TGTPIMRCDSTGDLYPVHTTPHYSITFPSTFAAISPLLWHNRLGHPG 1
           T   I RC+S+GDLYP         T  +   A    LWH RLGH G
Sbjct: 561 TRNVIARCNSSGDLYPFFP----PATSATALLAAPASLWHRRLGHLG 603


>gb|ABB47203.2| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 1050

 Score =  102 bits (254), Expect = 3e-20
 Identities = 56/110 (50%), Positives = 70/110 (63%), Gaps = 4/110 (3%)
 Frame = -2

Query: 321 IPILGHGHTNLPFPHPPLNLSNVLHTPQLVKNLIYVRRFTTDNNVSIEFDPFGFSVKDIR 142
           IP++ HG + LP      +L N+L  P LV+NL+ +R+FT DNN SIEFD FGFSVK +R
Sbjct: 318 IPVICHGTSFLPIGTTKFDLKNILVAPSLVRNLLSIRQFTRDNNCSIEFDEFGFSVKGLR 377

Query: 141 TGTPIMRCDSTGDLYPVHTTPHYSITFPS----TFAAISPLLWHNRLGHP 4
           T   I+RC+S GDLY   T P   I  P+    +F A S  LWH RLGHP
Sbjct: 378 TRRVILRCNSRGDLY---TLP---IAAPAIAAHSFLAQSSTLWHRRLGHP 421


>gb|AAM74347.1|AC115686_14 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1250

 Score =  102 bits (254), Expect = 3e-20
 Identities = 56/110 (50%), Positives = 70/110 (63%), Gaps = 4/110 (3%)
 Frame = -2

Query: 321 IPILGHGHTNLPFPHPPLNLSNVLHTPQLVKNLIYVRRFTTDNNVSIEFDPFGFSVKDIR 142
           IP++ HG + LP      +L N+L  P LV+NL+ +R+FT DNN SIEFD FGFSVK +R
Sbjct: 395 IPVICHGTSFLPIGTTKFDLKNILVAPSLVRNLLSIRQFTRDNNCSIEFDEFGFSVKGLR 454

Query: 141 TGTPIMRCDSTGDLYPVHTTPHYSITFPS----TFAAISPLLWHNRLGHP 4
           T   I+RC+S GDLY   T P   I  P+    +F A S  LWH RLGHP
Sbjct: 455 TRRVILRCNSRGDLY---TLP---IAAPAIAAHSFLAQSSTLWHRRLGHP 498