BLASTX nr result

ID: Cnidium21_contig00034836 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00034836
         (468 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301087.1| predicted protein [Populus trichocarpa] gi|2...    60   2e-07
ref|XP_003544237.1| PREDICTED: uncharacterized protein LOC100779...    57   2e-06
ref|XP_002272480.2| PREDICTED: uncharacterized protein LOC100242...    56   4e-06
ref|XP_003634420.1| PREDICTED: uncharacterized protein LOC100254...    56   4e-06
emb|CBI19243.3| unnamed protein product [Vitis vinifera]               56   4e-06

>ref|XP_002301087.1| predicted protein [Populus trichocarpa] gi|222842813|gb|EEE80360.1|
           predicted protein [Populus trichocarpa]
          Length = 925

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 27/40 (67%), Positives = 31/40 (77%)
 Frame = +2

Query: 116 LCWWCIYREPEHELVGKLQLYINYSTESNHLKVRQKSILE 235
           L WW IYREPEHELVGKLQLYINYST S+   ++  S+ E
Sbjct: 261 LRWWSIYREPEHELVGKLQLYINYSTSSDDSNLKCGSVAE 300


>ref|XP_003544237.1| PREDICTED: uncharacterized protein LOC100779084 [Glycine max]
          Length = 1233

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 26/35 (74%), Positives = 30/35 (85%), Gaps = 3/35 (8%)
 Frame = +2

Query: 116 LCWWCIYREPEHELVGKLQLYINYST---ESNHLK 211
           L WW IYREP+HELVGKLQLYINYST   +++HLK
Sbjct: 567 LRWWPIYREPDHELVGKLQLYINYSTSADDNSHLK 601


>ref|XP_002272480.2| PREDICTED: uncharacterized protein LOC100242393 [Vitis vinifera]
          Length = 1400

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 25/35 (71%), Positives = 29/35 (82%), Gaps = 3/35 (8%)
 Frame = +2

Query: 116 LCWWCIYREPEHELVGKLQLYINYST---ESNHLK 211
           L WW IY EPEHELVG++QLYINYST   E++HLK
Sbjct: 735 LRWWSIYHEPEHELVGRIQLYINYSTIVDENSHLK 769


>ref|XP_003634420.1| PREDICTED: uncharacterized protein LOC100254008 [Vitis vinifera]
          Length = 1304

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 26/37 (70%), Positives = 29/37 (78%), Gaps = 2/37 (5%)
 Frame = +2

Query: 107 GLSLCWWCIYREPEHELVGKLQLYINYST--ESNHLK 211
           G  L WW IY EPEHELVGK+QLYINYST  + N+LK
Sbjct: 637 GDKLRWWSIYHEPEHELVGKIQLYINYSTSLDENNLK 673


>emb|CBI19243.3| unnamed protein product [Vitis vinifera]
          Length = 1255

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 26/37 (70%), Positives = 29/37 (78%), Gaps = 2/37 (5%)
 Frame = +2

Query: 107 GLSLCWWCIYREPEHELVGKLQLYINYST--ESNHLK 211
           G  L WW IY EPEHELVGK+QLYINYST  + N+LK
Sbjct: 588 GDKLRWWSIYHEPEHELVGKIQLYINYSTSLDENNLK 624


Top