BLASTX nr result

ID: Cnidium21_contig00034825 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00034825
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003591130.1| DNA (cytosine-5)-methyltransferase 3B [Medic...    90   2e-16
ref|XP_003638290.1| hypothetical protein MTR_126s0001, partial [...    87   1e-15
pir||H85073 probable transposon protein [imported] - Arabidopsis...    84   1e-14
ref|XP_003590319.1| HAT family dimerization domain containing pr...    83   3e-14
gb|AAP59878.1| Ac-like transposase THELMA13 [Silene latifolia]         82   6e-14

>ref|XP_003591130.1| DNA (cytosine-5)-methyltransferase 3B [Medicago truncatula]
           gi|355480178|gb|AES61381.1| DNA
           (cytosine-5)-methyltransferase 3B [Medicago truncatula]
          Length = 722

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 41/108 (37%), Positives = 65/108 (60%)
 Frame = +1

Query: 4   MLESMLQYKPAFRRLQYVDTNFNDHVTEEEWRKIEKVCKFLKPFHDISSLFSKKECPTSN 183
           ML+S + Y+ AF  L   ++NF    T +EWR+ E +C  LKPF++I++L      P SN
Sbjct: 552 MLQSAINYRRAFYSLSLRNSNFKCCPTSDEWRRAETMCDILKPFYNITNLICDSSYPPSN 611

Query: 184 LYFSGIWKIQSLINVEMQDRNSILYNVAIEMNTKFKKHWDCYSLIFSF 327
           LYF  IWK++ LI   + + + ++ N+A  M   F K+W  Y ++F+F
Sbjct: 612 LYFGEIWKLECLIRSYLTNEDLLIQNMAGSMKETFDKYWINYGVVFAF 659


>ref|XP_003638290.1| hypothetical protein MTR_126s0001, partial [Medicago truncatula]
           gi|355504225|gb|AES85428.1| hypothetical protein
           MTR_126s0001, partial [Medicago truncatula]
          Length = 555

 Score = 87.0 bits (214), Expect = 1e-15
 Identities = 37/108 (34%), Positives = 68/108 (62%)
 Frame = +1

Query: 1   LMLESMLQYKPAFRRLQYVDTNFNDHVTEEEWRKIEKVCKFLKPFHDISSLFSKKECPTS 180
           ++LE  L+Y+ AF      D +++   + EEW+++EK+C FL PF + +++ +    PTS
Sbjct: 259 MLLERALKYRCAFESFHLYDDSYDLCPSAEEWKRVEKICAFLLPFCETANMINSTTHPTS 318

Query: 181 NLYFSGIWKIQSLINVEMQDRNSILYNVAIEMNTKFKKHWDCYSLIFS 324
           NLYF  +WK+Q ++   + D +  +  +A  M +KF+K+WD YS++ +
Sbjct: 319 NLYFLQVWKVQCVLVDSLGDEDEDIKKMAERMMSKFEKYWDEYSVVLA 366


>pir||H85073 probable transposon protein [imported] - Arabidopsis thaliana
           gi|5032279|gb|AAD38227.1|AF147264_10 may be a pseudogene
           [Arabidopsis thaliana] gi|7267351|emb|CAB81124.1|
           putative transposon protein [Arabidopsis thaliana]
          Length = 483

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 39/110 (35%), Positives = 67/110 (60%), Gaps = 1/110 (0%)
 Frame = +1

Query: 4   MLESMLQYKPAFRRLQYVDT-NFNDHVTEEEWRKIEKVCKFLKPFHDISSLFSKKECPTS 180
           ML+  L+Y+ AF  L+ +D  N+  H T+ EW +++++  FL+ F  I++L S    PTS
Sbjct: 230 MLDRALKYRAAFGNLKVIDAKNYKFHPTDAEWHRLQQMSDFLESFDQITNLISGSIYPTS 289

Query: 181 NLYFSGIWKIQSLINVEMQDRNSILYNVAIEMNTKFKKHWDCYSLIFSFA 330
           NLYF  +WK Q+ + V   +++ ++ N+ + M  +F K+W   S IF+ A
Sbjct: 290 NLYFMQVWKFQNWLTVNESNQDEVIRNMIVLMKERFDKYWAEVSNIFAIA 339


>ref|XP_003590319.1| HAT family dimerization domain containing protein [Medicago
           truncatula] gi|355479367|gb|AES60570.1| HAT family
           dimerization domain containing protein [Medicago
           truncatula]
          Length = 224

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 45/109 (41%), Positives = 64/109 (58%)
 Frame = +1

Query: 1   LMLESMLQYKPAFRRLQYVDTNFNDHVTEEEWRKIEKVCKFLKPFHDISSLFSKKECPTS 180
           LML+S + ++ AF  L   D+NF    T EEWR+ E +C  LK F++I++L S     +S
Sbjct: 103 LMLQSAIIHRRAFYSLSLRDSNFKCCPTIEEWRRAETMCDILKSFYNITNLIS----DSS 158

Query: 181 NLYFSGIWKIQSLINVEMQDRNSILYNVAIEMNTKFKKHWDCYSLIFSF 327
            LYF  IWKI+ LI   +     ++ NVA  M  KF K+W  YS++F F
Sbjct: 159 YLYFGKIWKIECLIRSYLTSEYILIQNVAGSMKDKFDKYWRDYSVVFIF 207


>gb|AAP59878.1| Ac-like transposase THELMA13 [Silene latifolia]
          Length = 682

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 43/114 (37%), Positives = 68/114 (59%), Gaps = 5/114 (4%)
 Frame = +1

Query: 4   MLESMLQYKPAFR-----RLQYVDTNFNDHVTEEEWRKIEKVCKFLKPFHDISSLFSKKE 168
           MLE  + Y+  F       ++  D +F +  +E EW +I K+ + LKPF  I++L S ++
Sbjct: 374 MLERAMIYRNVFPTMRGPEMKKFDPHFPEPPSEAEWIRIVKIVELLKPFDHITTLISGRK 433

Query: 169 CPTSNLYFSGIWKIQSLINVEMQDRNSILYNVAIEMNTKFKKHWDCYSLIFSFA 330
            PT+NLYF  +WKIQ L+    +  ++ L ++A  M  KF K+W+ YS+I SFA
Sbjct: 434 YPTANLYFKSVWKIQYLLTRYAKCNDTHLKDMADLMRIKFDKYWENYSMILSFA 487


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