BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00034813
         (511 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD28498.2| Polynucleotidyl transferase, Ribonuclease H fold ...   115   3e-24
emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulga...   112   3e-23
ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative rib...   112   4e-23
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga...   112   4e-23
ref|XP_002522452.1| nucleic acid binding protein, putative [Rici...   111   7e-23

>gb|ABD28498.2| Polynucleotidyl transferase, Ribonuclease H fold [Medicago
           truncatula]
          Length = 424

 Score =  115 bits (289), Expect = 3e-24
 Identities = 56/170 (32%), Positives = 93/170 (54%), Gaps = 3/170 (1%)
 Frame = +3

Query: 9   AGLGNNTSFIWRSIWASQNLVKVGARWRIGSGKAVRVLGDAWL-NDRQYPYIVSNHPILI 185
           A + +N S++WR +W  +++V+   +W IG+G+++ V    WL N  Q   +   H +  
Sbjct: 73  ASVSHNPSYVWRGLWRVKDMVRRSFQWSIGTGESISVWHQLWLGNHEQLTPVTELHSMWS 132

Query: 186 NQHVSSLMSTEMREWDMDIIRDLFDERDQNLICGIPLSRNQEEDIRYWSKEESGMYTFKS 365
              V++L+    ++W+   I  +FD      I   PL  + ++DI  W  E+ G Y+ +S
Sbjct: 133 ELRVANLLQVNAKQWNKSFINYVFDTGTAEQIYKTPLLPSVQQDIATWRFEKDGNYSIRS 192

Query: 366 AFKLMSELKGNWFPNAN--SGFWRRLWNLKIPPRAKNFLWRACKGFLPTR 509
           A+     L  N   N +  +G W  +WNLK+PP+ KNF+WRAC+  LPTR
Sbjct: 193 AY--CDILNNNTALNQHRVNGSWNSIWNLKLPPKVKNFMWRACRNCLPTR 240


>emb|CCA66040.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1362

 Score =  112 bits (280), Expect = 3e-23
 Identities = 60/175 (34%), Positives = 95/175 (54%), Gaps = 6/175 (3%)
 Frame = +3

Query: 3    LEAGLGNNTSFIWRSIWASQNLVKVGARWRIGSGKAVRVLGDAW-LNDRQYPYIVSNHPI 179
            LEA  G N SF WRSIW S++L+  G +W +GSG+ +RV  DAW L +  +         
Sbjct: 899  LEARRGYNPSFTWRSIWGSKSLLLEGLKWCVGSGERIRVWEDAWILGEGAHMVPTPQADS 958

Query: 180  LINQHVSSLMSTEMREWDMDIIRDLFDERDQNLICGIPLSRNQEEDIRYWSKEESGMYTF 359
             ++  V  L+      W+++ ++  F E +  L+  IPLSR   +D RYW    +G+++ 
Sbjct: 959  NLDLKVCDLIDVARGAWNIESVQQTFVEEEWELVLSIPLSRFLPDDHRYWWPSRNGIFSV 1018

Query: 360  KSAFKL--MSELKGNW---FPNANSGFWRRLWNLKIPPRAKNFLWRACKGFLPTR 509
            +S + L  +  ++  W        +  WRR+W L+ PP+  +FLWRACKG L  +
Sbjct: 1019 RSCYWLGRLGPVR-TWQLQHGERETELWRRVWQLQGPPKLSHFLWRACKGSLAVK 1072


>ref|XP_003635424.1| PREDICTED: LOW QUALITY PROTEIN: putative ribonuclease H protein
           At1g65750-like [Vitis vinifera]
          Length = 820

 Score =  112 bits (279), Expect = 4e-23
 Identities = 68/179 (37%), Positives = 94/179 (52%), Gaps = 10/179 (5%)
 Frame = +3

Query: 3   LEAGLGNNTSFIWRSIWASQNLVKVGARWRIGSGKAVRVLGDAWLNDRQYPYIVSNHPIL 182
           L A LG+N S++WRSI A+Q L+K G  W I SG  V+V GD+WL D       S++ ++
Sbjct: 364 LNAELGSNPSYMWRSILAAQGLLKRGCYWSIASGTKVQVWGDSWLPD-------SSNRLI 416

Query: 183 INQHVSSLMSTEMRE------WDMDIIRDLFDERDQNLICGIPLSRNQEEDIRYWSKEES 344
           I   V+     ++ E      W  D IRD F  RD +LI  IPL  +  ED   WS +  
Sbjct: 417 ITPPVAGFDGIKVDELITEGLWREDFIRDKFMARDADLILSIPLPMSSREDQISWSFDAR 476

Query: 345 GMYTFKS---AFKLMSELKGNWFPNANSGF-WRRLWNLKIPPRAKNFLWRACKGFLPTR 509
           G YT +S   A +   +       + +S F W +LW +  PP+  NF WRA +  LPTR
Sbjct: 477 GEYTARSGYGALRCFRQSTALVASDVDSNFVWAQLWKVTAPPKILNFAWRAARNCLPTR 535


>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1357

 Score =  112 bits (279), Expect = 4e-23
 Identities = 60/167 (35%), Positives = 92/167 (55%)
 Frame = +3

Query: 9    AGLGNNTSFIWRSIWASQNLVKVGARWRIGSGKAVRVLGDAWLNDRQYPYIVSNHPILIN 188
            A LG + S+ WRSIW +++LV  G  WR+G G  + +    W+ D +  +I S     + 
Sbjct: 905  ARLGYSHSYSWRSIWGAKSLVLEGLIWRVGDGTKIDIWSAPWVGDEEGRFIKSARVEGL- 963

Query: 189  QHVSSLMSTEMREWDMDIIRDLFDERDQNLICGIPLSRNQEEDIRYWSKEESGMYTFKSA 368
            + V  LM  E +EW++++I   F+ERDQ  I  IPLS    +D   W+  + G Y+ K+A
Sbjct: 964  EVVGDLMDVERKEWNVELIERHFNERDQQCILAIPLSTRCLQDELTWAYSKDGTYSVKTA 1023

Query: 369  FKLMSELKGNWFPNANSGFWRRLWNLKIPPRAKNFLWRACKGFLPTR 509
            + L    KG    + +   W  LW+L + P+ ++FLWRAC   LP R
Sbjct: 1024 YMLG---KGGNLDDFHR-VWNILWSLNVSPKVRHFLWRACTSSLPVR 1066


>ref|XP_002522452.1| nucleic acid binding protein, putative [Ricinus communis]
           gi|223538337|gb|EEF39944.1| nucleic acid binding
           protein, putative [Ricinus communis]
          Length = 483

 Score =  111 bits (277), Expect = 7e-23
 Identities = 62/170 (36%), Positives = 90/170 (52%), Gaps = 1/170 (0%)
 Frame = +3

Query: 3   LEAGLGNNTSFIWRSIWASQNLVKVGARWRIGSGKAVRVLGDAWLNDRQYPYIVSNHPIL 182
           L + LG N S+IW S+   ++L+  G +W+IG G  V +    WL D    +I +N P  
Sbjct: 43  LSSLLGTNPSYIWASLQQVRDLICKGVQWKIGKGTEVSIGLHEWLLDASNGFIETNLPDE 102

Query: 183 IN-QHVSSLMSTEMREWDMDIIRDLFDERDQNLICGIPLSRNQEEDIRYWSKEESGMYTF 359
           +  Q V SL+     +WD +I+ DLF ERD+NLI  I LS     D  +W K+  G ++ 
Sbjct: 103 LRLQPVCSLLKPGTCDWDQEILNDLFSERDKNLINSIVLSPTVGTDQLFWFKDPKGKFSV 162

Query: 360 KSAFKLMSELKGNWFPNANSGFWRRLWNLKIPPRAKNFLWRACKGFLPTR 509
           K  +++        +P +N   WRRLW L I  + K F+WRA    LP R
Sbjct: 163 KDVYRVQQPDFSVLYP-SNVVVWRRLWKLNIAAKCKVFMWRALTNRLPVR 211