BLASTX nr result

ID: Cnidium21_contig00034809 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00034809
         (634 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74230.1| hypothetical protein VITISV_000585 [Vitis vinifera]    93   5e-17
ref|XP_003557045.1| PREDICTED: uncharacterized protein LOC100783...    89   7e-16
emb|CAB78071.1| putative protein [Arabidopsis thaliana]                88   1e-15
ref|XP_003555650.1| PREDICTED: uncharacterized protein LOC100817...    88   2e-15
emb|CAB10225.1| retrovirus-related like polyprotein [Arabidopsis...    86   4e-15

>emb|CAN74230.1| hypothetical protein VITISV_000585 [Vitis vinifera]
          Length = 334

 Score = 92.8 bits (229), Expect = 5e-17
 Identities = 42/112 (37%), Positives = 70/112 (62%)
 Frame = +2

Query: 299 EMLNPIFLHPSENTTSIQVEKLQGSADYRSWSRSIEIHLASKRKLGFINGTVQKPTDDDN 478
           E L+P  LH S++   + V K+    +Y +WSR++ I L++K K+GF+ G+++ P+  D+
Sbjct: 16  EALDPFSLHHSDHPGMVLVSKVLEGDNYSTWSRAMRISLSAKDKIGFVTGSIKPPSSTDD 75

Query: 479 KAEMWETCNHMVIVCLTSNVSSTIRQSIMYMTTASDIWKNLEKRFALTNGSR 634
               W+ CN MVI  L +++   I  S++Y  TAS+IW +L +RF+  N SR
Sbjct: 76  SFPSWQRCNDMVISWLLNSIHPDIASSVIYAETASEIWADLRERFSQGNDSR 127


>ref|XP_003557045.1| PREDICTED: uncharacterized protein LOC100783177 [Glycine max]
          Length = 2219

 Score = 89.0 bits (219), Expect = 7e-16
 Identities = 42/129 (32%), Positives = 77/129 (59%), Gaps = 4/129 (3%)
 Frame = +2

Query: 242 FISISTSDIMGT---PPRLTYQEMLNPIFLHPSENTTSIQVEKLQGSADYRSWSRSIEIH 412
           ++ +S +D++G    PP     +  +P F+HPS+  +S++V  L   ++Y SW+RS+   
Sbjct: 187 YLDLSDNDLLGEAPPPPADPSTDPTSPFFVHPSDGPSSVKVTPLLDGSNYHSWARSLRRA 246

Query: 413 LASKRKLGFINGTVQKPTDD-DNKAEMWETCNHMVIVCLTSNVSSTIRQSIMYMTTASDI 589
           L +K K  F++GT+  P D  D     W  CN ++   + ++V  +I +SI++M  ASD+
Sbjct: 247 LGAKLKFEFLDGTIPMPVDAFDPSFRAWNRCNMLIHSWILNSVEPSISRSIVFMDNASDV 306

Query: 590 WKNLEKRFA 616
           W +L++RF+
Sbjct: 307 WLDLKERFS 315


>emb|CAB78071.1| putative protein [Arabidopsis thaliana]
          Length = 290

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 44/110 (40%), Positives = 63/110 (57%), Gaps = 1/110 (0%)
 Frame = +2

Query: 308 NPIFLHPSENTTSIQV-EKLQGSADYRSWSRSIEIHLASKRKLGFINGTVQKPTDDDNKA 484
           NP FLH S+    I V ++    +++ SW RS+ + L  + KLGFI+GT+ +P      A
Sbjct: 13  NPYFLHSSDQAGLILVSDRPSSGSEFHSWRRSVRMALNVRNKLGFIDGTIPQPPSTHRDA 72

Query: 485 EMWETCNHMVIVCLTSNVSSTIRQSIMYMTTASDIWKNLEKRFALTNGSR 634
             W  CN MV   L ++VS  I QS+++M+TA  IWKNL  RF   +  R
Sbjct: 73  GSWSRCNDMVATWLMNSVSKKIGQSLLFMSTAESIWKNLLSRFKQDDAPR 122


>ref|XP_003555650.1| PREDICTED: uncharacterized protein LOC100817175 [Glycine max]
          Length = 2045

 Score = 87.8 bits (216), Expect = 2e-15
 Identities = 39/101 (38%), Positives = 66/101 (65%)
 Frame = +2

Query: 314 IFLHPSENTTSIQVEKLQGSADYRSWSRSIEIHLASKRKLGFINGTVQKPTDDDNKAEMW 493
           ++LHPSEN  +  V  +  S +Y SWSRS+   L++K K+ FI+G+  +P   D     W
Sbjct: 360 LYLHPSENPATALVSPVLDSTNYHSWSRSMVTALSAKNKVEFIDGSAPEPLKTDRMHGAW 419

Query: 494 ETCNHMVIVCLTSNVSSTIRQSIMYMTTASDIWKNLEKRFA 616
             CN+MV+  +  +V+++IRQSI++M  A +IW++L+ R++
Sbjct: 420 CRCNNMVVSWIVHSVATSIRQSILWMDKAEEIWRDLKSRYS 460


>emb|CAB10225.1| retrovirus-related like polyprotein [Arabidopsis thaliana]
           gi|7268152|emb|CAB78488.1| retrovirus-related like
           polyprotein [Arabidopsis thaliana]
          Length = 1489

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 45/122 (36%), Positives = 66/122 (54%), Gaps = 1/122 (0%)
 Frame = +2

Query: 272 GTPPRLTYQEMLNPIFLHPSENTTSIQV-EKLQGSADYRSWSRSIEIHLASKRKLGFING 448
           G   R    +  NP +LH +++   I V ++L  ++D+ SW RSI + L  + KLGFING
Sbjct: 20  GDQIRYPVDQYENPYYLHSADHAGLILVSDRLTTASDFHSWRRSILMALNVRNKLGFING 79

Query: 449 TVQKPTDDDNKAEMWETCNHMVIVCLTSNVSSTIRQSIMYMTTASDIWKNLEKRFALTNG 628
           T+ KP +D      W  CN +V   L ++V   I QS++Y+ T   IW NL  RF   + 
Sbjct: 80  TITKPPEDHRDFGAWSRCNDIVSTWLMNSVDKKIGQSLLYIATVQGIWNNLLSRFKQDDA 139

Query: 629 SR 634
            R
Sbjct: 140 PR 141


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