BLASTX nr result

ID: Cnidium21_contig00034793 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00034793
         (789 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002526240.1| conserved hypothetical protein [Ricinus comm...   129   7e-28
ref|XP_002269241.1| PREDICTED: F-box protein At5g07610 [Vitis vi...   124   3e-26
ref|XP_002511000.1| hypothetical protein RCOM_1501190 [Ricinus c...   123   5e-26
ref|XP_002267226.1| PREDICTED: F-box protein At5g07610 [Vitis vi...   120   4e-25
ref|XP_002315369.1| f-box family protein [Populus trichocarpa] g...   108   1e-21

>ref|XP_002526240.1| conserved hypothetical protein [Ricinus communis]
           gi|223534434|gb|EEF36137.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 393

 Score =  129 bits (324), Expect = 7e-28
 Identities = 77/213 (36%), Positives = 119/213 (55%), Gaps = 6/213 (2%)
 Frame = -3

Query: 757 YLSETMTWKFSTIPPFVPTISLSMSNLAYFKGSIYWISSSKVVNLMLAYNVDEDRLATLP 578
           Y SE   W+ S +P FV    +   N  ++ G+I+WIS++      + +++D + ++++P
Sbjct: 187 YQSEIAAWRLSGLP-FVAPFDMVFDNGVFWNGAIHWISAT---GNAIYFDMDRECISSMP 242

Query: 577 RPPHRNSGVVRRNLYFGESAGHLHIAEVFSRAASFLDVYELNSDRSGWFLKFKVDLDQLS 398
           + P       RR  YFGES GHLH+ E++    +  +VYE+  D S W ++++V LD + 
Sbjct: 243 KLPFSYEWGKRRFRYFGESDGHLHLIEIYGLRTTQFNVYEMEKDYSFWRIRYRVQLDHVV 302

Query: 397 KAFPEMTHNRHTV--VNEYAFSVLSLLRRNEDIEEDSVLVLEVPGKVILYNLVHQSWKVL 224
            AFPEM  +       N YAF VLSL+   ED  E+S L+L +PGKVI YNL ++++K +
Sbjct: 303 AAFPEMVRSYLDAGDSNYYAFVVLSLV--EEDATEESSLLLHIPGKVISYNLKNKTFKKV 360

Query: 223 CNLCRADNA----RNWFCGILKAIDYNESLACV 137
           C L           +   G L A  Y E+LACV
Sbjct: 361 CELSYGTGGSRTKESLQFGWLDAYQYIETLACV 393


>ref|XP_002269241.1| PREDICTED: F-box protein At5g07610 [Vitis vinifera]
           gi|297743579|emb|CBI36446.3| unnamed protein product
           [Vitis vinifera]
          Length = 374

 Score =  124 bits (310), Expect = 3e-26
 Identities = 76/205 (37%), Positives = 115/205 (56%), Gaps = 1/205 (0%)
 Frame = -3

Query: 748 ETMTWKFSTIPPFVPTISLSMSNLAYFKGSIYWISSSKVVNLMLAYNVDEDRLATLPRPP 569
           ET  W+ S +P F   IS+   +  Y+ G+I+WIS  +     L ++++E+ +  +P PP
Sbjct: 182 ETGPWRVSGVP-FAAPISVDFPSGVYWNGAIHWISPREA---SLYFDLNEELVREMPMPP 237

Query: 568 HRNSGVVRRNLYFGESAGHLHIAEVFSRAASFLDVYELNSDRSGWFLKFKVDLDQLSKAF 389
             +    R    FGES GHLH+ E++  + +  +VYE+  D SGWF+KF+VDL+ ++ AF
Sbjct: 238 VPDDSNERGIRCFGESCGHLHLVEIYESSTTQFNVYEMERDHSGWFVKFRVDLNGVALAF 297

Query: 388 PEMTHNRHTVVN-EYAFSVLSLLRRNEDIEEDSVLVLEVPGKVILYNLVHQSWKVLCNLC 212
           P +    H   +  Y+FSVL ++RR +  EEDS L L +PGKVI YN   +S++     C
Sbjct: 298 PGIIEGYHEEYDYMYSFSVLCIVRREK--EEDSFLALHIPGKVIGYNFSSKSYQTSDTDC 355

Query: 211 RADNARNWFCGILKAIDYNESLACV 137
               A  W      A  Y ESL+ V
Sbjct: 356 PL--AFGW----SYAFQYIESLSLV 374


>ref|XP_002511000.1| hypothetical protein RCOM_1501190 [Ricinus communis]
           gi|223550115|gb|EEF51602.1| hypothetical protein
           RCOM_1501190 [Ricinus communis]
          Length = 332

 Score =  123 bits (308), Expect = 5e-26
 Identities = 64/183 (34%), Positives = 109/183 (59%), Gaps = 2/183 (1%)
 Frame = -3

Query: 760 VYLSETMTWKFSTIPPFVPTISLSMSNLAYFKGSIYWISSSKVVNLMLAYNVDEDRLATL 581
           VY S+T  W+ +     +  +        ++ G+I+W + S        ++VD++++  +
Sbjct: 123 VYSSKTGLWRVTAASFTLDNMDFGFYGGVFWNGAIHWYTDS---GPSFCFDVDQEQIREM 179

Query: 580 PRPPHRNSGVVRRNLYFGESAGHLHIAEVFSRAASFLDVYELNSDRSGWFLKFKVDLDQL 401
           P PP  +    RR +YFGES GHL++ E++  AA+  +V EL  D SGWF+K++++L+++
Sbjct: 180 PMPPIPDDWYRRRVIYFGESGGHLNLIEIYHHAATQFNVCELAKDYSGWFVKYRIELEEV 239

Query: 400 SKAFPEM--THNRHTVVNEYAFSVLSLLRRNEDIEEDSVLVLEVPGKVILYNLVHQSWKV 227
             AFPEM  T    TV+N YA+ +  ++R   D  E+S +VL +P K+I YNL  +S+K 
Sbjct: 240 IIAFPEMIKTQFEPTVLNYYAYEIWCIVRGESD--ENSYMVLHMPAKIIRYNLKGKSFKK 297

Query: 226 LCN 218
           LC+
Sbjct: 298 LCD 300


>ref|XP_002267226.1| PREDICTED: F-box protein At5g07610 [Vitis vinifera]
           gi|296090309|emb|CBI40128.3| unnamed protein product
           [Vitis vinifera]
          Length = 415

 Score =  120 bits (300), Expect = 4e-25
 Identities = 75/217 (34%), Positives = 118/217 (54%), Gaps = 9/217 (4%)
 Frame = -3

Query: 760 VYLSETMTWKFSTIPPFVPTISLSMSNLAYFKGSIYWISSSKVVNLMLAYNVDEDRLATL 581
           +Y S T  W+ S   PF     +   +  ++ G+++WIS S      L + +DE R+ T+
Sbjct: 204 IYSSGTGDWRLSG-KPFRAPFDMVFYDGVFWNGAVHWISPS---GASLYFGIDEGRIDTM 259

Query: 580 PRPPHRNSGVVRRNL-YFGESAGHLHIAEVFSRAASFLDVYELNSDRSGWFLKFKVDLDQ 404
           P PP    G  +R + +FGES GHLHI E++    +   VYE+  D S W ++F VDLD+
Sbjct: 260 PPPPPGPGGWGKRRIRHFGESGGHLHIIEIYGPRTTQFVVYEMERDYSNWGVRFSVDLDK 319

Query: 403 LSKAFPEMTHNRHTV--VNEYAFSVLSLLRRNEDIEEDSVLVLEVPGKVILYNLVHQSWK 230
           +  AFPE+T N      +  YA++VL L+R   + EED  L+L++ GK+I YN+   S+K
Sbjct: 320 VIAAFPEITQNYLDAHDLYYYAYNVLCLIRGGGN-EEDFSLLLQIRGKIICYNIKDGSFK 378

Query: 229 VLCNLCRADN------ARNWFCGILKAIDYNESLACV 137
            + ++   +         +   G L+A  Y E+L CV
Sbjct: 379 NVYDVAHGNPPALPPVKASSLIGCLEAYPYMETLTCV 415


>ref|XP_002315369.1| f-box family protein [Populus trichocarpa]
           gi|222864409|gb|EEF01540.1| f-box family protein
           [Populus trichocarpa]
          Length = 406

 Score =  108 bits (270), Expect = 1e-21
 Identities = 53/158 (33%), Positives = 89/158 (56%)
 Frame = -3

Query: 673 YFKGSIYWISSSKVVNLMLAYNVDEDRLATLPRPPHRNSGVVRRNLYFGESAGHLHIAEV 494
           +   +++WIS      L L ++++++R+ T+P PP       RR  YFGES GHL + E+
Sbjct: 227 FLNRALHWISRGA---LALRFDIEQERMLTMPMPPIPEGRSERRLGYFGESGGHLCLIEI 283

Query: 493 FSRAASFLDVYELNSDRSGWFLKFKVDLDQLSKAFPEMTHNRHTVVNEYAFSVLSLLRRN 314
           +    +  DV  + SD SGW ++++VDL +++ +FP M  N    ++ Y FS+L L  R+
Sbjct: 284 YGPITTCFDVMRMESDYSGWSVRYRVDLSRIASSFPSMARNNVQDIHRYLFSILHLADRS 343

Query: 313 EDIEEDSVLVLEVPGKVILYNLVHQSWKVLCNLCRADN 200
           +  E++S + L +PG  I YNL    W  L ++    N
Sbjct: 344 QVGEDESSMWLHIPGTFISYNLKDGKWSKLQSILHQIN 381


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