BLASTX nr result

ID: Cnidium21_contig00034779 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00034779
         (368 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_174954.1| General transcription factor 2-related zinc fin...   141   6e-32
gb|AAF82236.1|AC069143_12 Contains similarity to a transposable ...   139   3e-31
ref|NP_173360.1| TTF-type zinc finger protein with HAT dimerizat...   139   3e-31
ref|XP_002451298.1| hypothetical protein SORBIDRAFT_05g027190 [S...   137   7e-31
ref|NP_001172871.1| Os02g0234000 [Oryza sativa Japonica Group] g...   137   9e-31

>ref|NP_174954.1| General transcription factor 2-related zinc finger protein
           [Arabidopsis thaliana] gi|332193792|gb|AEE31913.1|
           General transcription factor 2-related zinc finger
           protein [Arabidopsis thaliana]
          Length = 496

 Score =  141 bits (355), Expect = 6e-32
 Identities = 66/122 (54%), Positives = 91/122 (74%)
 Frame = -3

Query: 366 ILNAISLVKSTKRQLQKFRLDGWVSLLEKVFPFCDKHGIEKLNMADPFINPKNRRQKTGI 187
           ILN +SLVKSTK+QL K R DGW SL+ +VF FC KH IE + M   F+NP+N R+++ +
Sbjct: 345 ILNPMSLVKSTKQQLCKLRDDGWDSLVNEVFSFCKKHDIELVIMDGEFVNPRNPRKRSNM 404

Query: 186 TYEHYYSFDCFNVVVDMQLAEFDDRFNEVNSELLICMAALDPRDLFGAFDSLQLMRLVDF 7
           T  H+Y  +CF  ++DMQ+ EF+DRF+EVN+ELL C+A+L P D F  FD L+++RL +F
Sbjct: 405 TNFHHYQVECFYTILDMQIQEFNDRFDEVNTELLSCVASLSPIDSFHEFDQLKVLRLSEF 464

Query: 6   YP 1
           YP
Sbjct: 465 YP 466


>gb|AAF82236.1|AC069143_12 Contains similarity to a transposable element Tip100 protein for
           transposase from Ipomoea purpurea gb|4063769 and is a
           member of the transmembrane 4 family PF|00335
           [Arabidopsis thaliana]
          Length = 811

 Score =  139 bits (349), Expect = 3e-31
 Identities = 69/122 (56%), Positives = 87/122 (71%)
 Frame = -3

Query: 366 ILNAISLVKSTKRQLQKFRLDGWVSLLEKVFPFCDKHGIEKLNMADPFINPKNRRQKTGI 187
           ILNAISLVK+TK QLQK R DGW + + KV  F +K+    L M + F++ +  R+KTGI
Sbjct: 562 ILNAISLVKTTKCQLQKVRDDGWDAFMAKVSSFSEKNNTGMLKMEEEFVDSRRPRKKTGI 621

Query: 186 TYEHYYSFDCFNVVVDMQLAEFDDRFNEVNSELLICMAALDPRDLFGAFDSLQLMRLVDF 7
           T  H+Y  DCF  V+DMQL EF+DRF+EVNSELLICM++L P D F  FD   L+RL +F
Sbjct: 622 TNLHHYKVDCFYTVLDMQLQEFNDRFDEVNSELLICMSSLSPIDSFRQFDKSMLVRLTEF 681

Query: 6   YP 1
           YP
Sbjct: 682 YP 683


>ref|NP_173360.1| TTF-type zinc finger protein with HAT dimerization domain
           [Arabidopsis thaliana] gi|332191703|gb|AEE29824.1|
           TTF-type zinc finger protein with HAT dimerization
           domain [Arabidopsis thaliana]
          Length = 769

 Score =  139 bits (349), Expect = 3e-31
 Identities = 69/122 (56%), Positives = 87/122 (71%)
 Frame = -3

Query: 366 ILNAISLVKSTKRQLQKFRLDGWVSLLEKVFPFCDKHGIEKLNMADPFINPKNRRQKTGI 187
           ILNAISLVK+TK QLQK R DGW + + KV  F +K+    L M + F++ +  R+KTGI
Sbjct: 520 ILNAISLVKTTKCQLQKVRDDGWDAFMAKVSSFSEKNNTGMLKMEEEFVDSRRPRKKTGI 579

Query: 186 TYEHYYSFDCFNVVVDMQLAEFDDRFNEVNSELLICMAALDPRDLFGAFDSLQLMRLVDF 7
           T  H+Y  DCF  V+DMQL EF+DRF+EVNSELLICM++L P D F  FD   L+RL +F
Sbjct: 580 TNLHHYKVDCFYTVLDMQLQEFNDRFDEVNSELLICMSSLSPIDSFRQFDKSMLVRLTEF 639

Query: 6   YP 1
           YP
Sbjct: 640 YP 641


>ref|XP_002451298.1| hypothetical protein SORBIDRAFT_05g027190 [Sorghum bicolor]
           gi|241937141|gb|EES10286.1| hypothetical protein
           SORBIDRAFT_05g027190 [Sorghum bicolor]
          Length = 780

 Score =  137 bits (346), Expect = 7e-31
 Identities = 64/122 (52%), Positives = 84/122 (68%)
 Frame = -3

Query: 366 ILNAISLVKSTKRQLQKFRLDGWVSLLEKVFPFCDKHGIEKLNMADPFINPKNRRQKTGI 187
           I+NAI  VKST+  L   R DGW  LL++V  FC+KH I+++ M D +I+P+  R+KTGI
Sbjct: 529 IVNAIGCVKSTRLHLNNLRRDGWDKLLDEVNEFCNKHEIDQMEMEDTYIDPRQPRKKTGI 588

Query: 186 TYEHYYSFDCFNVVVDMQLAEFDDRFNEVNSELLICMAALDPRDLFGAFDSLQLMRLVDF 7
           TY+H+Y  DCFN V+D  + E D RF+E +S+LL+C AA DPRD F AFD   LM L   
Sbjct: 589 TYKHHYEVDCFNDVIDWLVQELDSRFSETSSQLLVCSAAFDPRDQFHAFDVETLMSLAKL 648

Query: 6   YP 1
           YP
Sbjct: 649 YP 650


>ref|NP_001172871.1| Os02g0234000 [Oryza sativa Japonica Group]
           gi|255670746|dbj|BAH91600.1| Os02g0234000 [Oryza sativa
           Japonica Group]
          Length = 949

 Score =  137 bits (345), Expect = 9e-31
 Identities = 65/122 (53%), Positives = 82/122 (67%)
 Frame = -3

Query: 366 ILNAISLVKSTKRQLQKFRLDGWVSLLEKVFPFCDKHGIEKLNMADPFINPKNRRQKTGI 187
           I+NA+  VKST+  L   R DGW +LL  V+ FCDK+ I KL M + ++NPK +RQKTGI
Sbjct: 514 IVNAVKCVKSTRCHLDDLRRDGWENLLGDVYAFCDKYDIIKLEMGEAYVNPKKQRQKTGI 573

Query: 186 TYEHYYSFDCFNVVVDMQLAEFDDRFNEVNSELLICMAALDPRDLFGAFDSLQLMRLVDF 7
           T +H+Y  DCFN V+D  L E D RFNE +SELL+C AA  PR+ F  F+   LMRL   
Sbjct: 574 TNQHHYEVDCFNDVIDWLLQELDSRFNETSSELLLCSAAFSPRESFHDFNVENLMRLAKL 633

Query: 6   YP 1
           YP
Sbjct: 634 YP 635


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