BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00034771
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281132.1| PREDICTED: pentatricopeptide repeat-containi...   100   2e-19
ref|NP_179197.1| pentatricopeptide repeat-containing protein [Ar...    91   1e-16
emb|CBI32533.3| unnamed protein product [Vitis vinifera]               90   2e-16
ref|XP_003537906.1| PREDICTED: pentatricopeptide repeat-containi...    84   9e-15
ref|XP_004161634.1| PREDICTED: pentatricopeptide repeat-containi...    82   3e-14

>ref|XP_002281132.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g15980-like [Vitis vinifera]
          Length = 492

 Score =  100 bits (248), Expect = 2e-19
 Identities = 45/70 (64%), Positives = 59/70 (84%)
 Frame = -3

Query: 212 KTVITTAVTVLKHHRSKSRWTHLRSLFPDGFTPTQVSQITLQLRNNPHLALNYFNFTVQH 33
           KT+I+TAV++L+H RSKSRW+HL+SLFP GFTPT+ SQI LQ++NNPHLAL++F +    
Sbjct: 34  KTLISTAVSILRHQRSKSRWSHLQSLFPKGFTPTEASQIVLQIKNNPHLALSFFLWCHHK 93

Query: 32  SLCCHSLDSY 3
           SLC H+L SY
Sbjct: 94  SLCNHTLLSY 103


>ref|NP_179197.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75267579|sp|Q9XIM8.1|PP155_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g15980 gi|5306237|gb|AAD41970.1| hypothetical protein
           [Arabidopsis thaliana] gi|330251359|gb|AEC06453.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 498

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 42/67 (62%), Positives = 53/67 (79%)
 Frame = -3

Query: 206 VITTAVTVLKHHRSKSRWTHLRSLFPDGFTPTQVSQITLQLRNNPHLALNYFNFTVQHSL 27
           +I+ AV++L HHRSKSRW+ LRSL P GFTP+Q S+ITL LRNNPHL+L +F FT ++SL
Sbjct: 41  LISDAVSILTHHRSKSRWSTLRSLQPSGFTPSQFSEITLCLRNNPHLSLRFFLFTRRYSL 100

Query: 26  CCHSLDS 6
           C H   S
Sbjct: 101 CSHDTHS 107


>emb|CBI32533.3| unnamed protein product [Vitis vinifera]
          Length = 299

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 38/54 (70%), Positives = 50/54 (92%)
 Frame = -3

Query: 212 KTVITTAVTVLKHHRSKSRWTHLRSLFPDGFTPTQVSQITLQLRNNPHLALNYF 51
           KT+I+TAV++L+H RSKSRW+HL+SLFP GFTPT+ SQI LQ++NNPHLAL++F
Sbjct: 34  KTLISTAVSILRHQRSKSRWSHLQSLFPKGFTPTEASQIVLQIKNNPHLALSFF 87


>ref|XP_003537906.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g15980-like [Glycine max]
          Length = 487

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 37/70 (52%), Positives = 53/70 (75%)
 Frame = -3

Query: 212 KTVITTAVTVLKHHRSKSRWTHLRSLFPDGFTPTQVSQITLQLRNNPHLALNYFNFTVQH 33
           ++++T AV++L HHRSKSRW++LRS  P+G TP + S+ITL ++N P LAL +F +T   
Sbjct: 32  QSLVTDAVSILTHHRSKSRWSNLRSACPNGITPAEFSEITLHIKNKPQLALRFFLWTKSK 91

Query: 32  SLCCHSLDSY 3
           SLC H+L SY
Sbjct: 92  SLCNHNLASY 101


>ref|XP_004161634.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g15980-like [Cucumis sativus]
          Length = 499

 Score = 82.4 bits (202), Expect = 3e-14
 Identities = 40/70 (57%), Positives = 49/70 (70%)
 Frame = -3

Query: 212 KTVITTAVTVLKHHRSKSRWTHLRSLFPDGFTPTQVSQITLQLRNNPHLALNYFNFTVQH 33
           K  I+T V+VL H RSKSRW  L SL P+GF P + S I LQ++NNPHLAL +F +T   
Sbjct: 40  KPSISTVVSVLTHQRSKSRWRFLNSLCPNGFDPGEFSDILLQIKNNPHLALRFFLWTQNK 99

Query: 32  SLCCHSLDSY 3
           SLC H+L SY
Sbjct: 100 SLCNHNLISY 109