BLASTX nr result

ID: Cnidium21_contig00034712 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00034712
         (600 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002318543.1| predicted protein [Populus trichocarpa] gi|2...   224   1e-56
ref|XP_002321481.1| predicted protein [Populus trichocarpa] gi|2...   219   4e-55
ref|NP_175308.1| AP-3 complex subunit delta [Arabidopsis thalian...   218   5e-55
ref|XP_002894132.1| delta-adaptin [Arabidopsis lyrata subsp. lyr...   217   1e-54
ref|XP_003524366.1| PREDICTED: AP-3 complex subunit delta-like [...   206   3e-51

>ref|XP_002318543.1| predicted protein [Populus trichocarpa] gi|222859216|gb|EEE96763.1|
           predicted protein [Populus trichocarpa]
          Length = 968

 Score =  224 bits (570), Expect = 1e-56
 Identities = 117/188 (62%), Positives = 149/188 (79%)
 Frame = +1

Query: 37  STPSLMDTLFQRSLDDLIKGLRLHLPGPPTSNFITQNVEEIKKEIKSTDLNTKSTALHKL 216
           ++PSLMDTLFQRSLDD+IKGLR        S FI++ +EEI++EIK+TDL TKSTAL KL
Sbjct: 2   ASPSLMDTLFQRSLDDIIKGLRHQQS--TESTFISKVIEEIRREIKTTDLQTKSTALQKL 59

Query: 217 TYLHSIYAINMSNWASFHAIELTSSPSFAHKKIGYLAVTMSFNSNTEVLLLLVNQLRKDL 396
           TYL+SI++I+MS WASFHAIE  SSP+FAHKKIGYLA++ SFN +T V+LL+ NQLRKDL
Sbjct: 60  TYLNSIHSIDMS-WASFHAIECISSPTFAHKKIGYLAISQSFNESTPVILLITNQLRKDL 118

Query: 397 GSPCEFEVSLALETIGLVINQELAVDLIDNVFVLITSSKSFVRKKAIVTLLRVFEVYPEG 576
            S  EFEVSLAL+ +  +   +L  DL   VF L+++SK FVRKKA+  +LR+FE YP+ 
Sbjct: 119 NSGNEFEVSLALDCLSRIGTVDLCRDLTSEVFTLMSTSKVFVRKKAVSVVLRLFEKYPDA 178

Query: 577 IKVCFKRL 600
           ++VCFKRL
Sbjct: 179 VRVCFKRL 186


>ref|XP_002321481.1| predicted protein [Populus trichocarpa] gi|222868477|gb|EEF05608.1|
           predicted protein [Populus trichocarpa]
          Length = 799

 Score =  219 bits (557), Expect = 4e-55
 Identities = 116/188 (61%), Positives = 147/188 (78%)
 Frame = +1

Query: 37  STPSLMDTLFQRSLDDLIKGLRLHLPGPPTSNFITQNVEEIKKEIKSTDLNTKSTALHKL 216
           ++PSLMDTLFQRSLDD+IKG+R        S FI++ +EEI++EIKSTDL TKSTAL KL
Sbjct: 4   ASPSLMDTLFQRSLDDIIKGVRQQ-QSSTESIFISKVIEEIRREIKSTDLRTKSTALQKL 62

Query: 217 TYLHSIYAINMSNWASFHAIELTSSPSFAHKKIGYLAVTMSFNSNTEVLLLLVNQLRKDL 396
           TYL+SI+ I+MS WASFHAIE  SSP+F+HKKIGYLA++ SFN +T V+LL+ NQLRKDL
Sbjct: 63  TYLNSIHFIDMS-WASFHAIECISSPTFSHKKIGYLAISQSFNESTPVILLISNQLRKDL 121

Query: 397 GSPCEFEVSLALETIGLVINQELAVDLIDNVFVLITSSKSFVRKKAIVTLLRVFEVYPEG 576
            S  EFEVSLAL+ +  +   +L  DL   VF L++SSK FVRKK I  +LR+FE YP+ 
Sbjct: 122 KSSNEFEVSLALDCLSRIGTVDLCRDLTSEVFTLMSSSKVFVRKKGIGVVLRLFEKYPDA 181

Query: 577 IKVCFKRL 600
           ++VCFK+L
Sbjct: 182 VRVCFKKL 189


>ref|NP_175308.1| AP-3 complex subunit delta [Arabidopsis thaliana]
           gi|30694404|ref|NP_849785.1| AP-3 complex subunit delta
           [Arabidopsis thaliana] gi|79319515|ref|NP_001031156.1|
           AP-3 complex subunit delta [Arabidopsis thaliana]
           gi|75169245|sp|Q9C744.1|AP3D_ARATH RecName: Full=AP-3
           complex subunit delta; AltName: Full=Adapter-related
           protein complex 3 subunit delta; AltName:
           Full=Delta-adaptin; Short=At-d-Ad; Short=At-delta-Ad
           gi|12597810|gb|AAG60121.1|AC073555_5 delta-adaptin,
           putative [Arabidopsis thaliana]
           gi|15810217|gb|AAL07009.1| At1g48760/F11I4_7
           [Arabidopsis thaliana] gi|332194224|gb|AEE32345.1| AP-3
           complex subunit delta [Arabidopsis thaliana]
           gi|332194225|gb|AEE32346.1| AP-3 complex subunit delta
           [Arabidopsis thaliana] gi|332194226|gb|AEE32347.1| AP-3
           complex subunit delta [Arabidopsis thaliana]
          Length = 869

 Score =  218 bits (556), Expect = 5e-55
 Identities = 114/188 (60%), Positives = 146/188 (77%)
 Frame = +1

Query: 37  STPSLMDTLFQRSLDDLIKGLRLHLPGPPTSNFITQNVEEIKKEIKSTDLNTKSTALHKL 216
           S+ S+MD LFQRSL+DLIKG RL L G   SNFI++ VEEI++EIK+TDL+TKSTALHKL
Sbjct: 4   SSTSIMDNLFQRSLEDLIKGFRLQLLGE--SNFISRAVEEIRREIKATDLSTKSTALHKL 61

Query: 217 TYLHSIYAINMSNWASFHAIELTSSPSFAHKKIGYLAVTMSFNSNTEVLLLLVNQLRKDL 396
           +YL +++ ++MS WA+FHA+E+ SS  F HK+IGY A+T SFN  T V+LL+ NQ+RKDL
Sbjct: 62  SYLAALHGVDMS-WAAFHAVEVVSSSRFQHKRIGYQAITQSFNDQTSVMLLITNQVRKDL 120

Query: 397 GSPCEFEVSLALETIGLVINQELAVDLIDNVFVLITSSKSFVRKKAIVTLLRVFEVYPEG 576
            S  E+EVSLALE +  +   +LA DL   VF L+ SSKSFV+KKAI  +LRVFE Y + 
Sbjct: 121 NSANEYEVSLALECLSRIGTHDLARDLTPEVFTLLGSSKSFVKKKAIGVVLRVFEKYHDA 180

Query: 577 IKVCFKRL 600
           +KVCFKRL
Sbjct: 181 VKVCFKRL 188


>ref|XP_002894132.1| delta-adaptin [Arabidopsis lyrata subsp. lyrata]
           gi|297339974|gb|EFH70391.1| delta-adaptin [Arabidopsis
           lyrata subsp. lyrata]
          Length = 863

 Score =  217 bits (553), Expect = 1e-54
 Identities = 113/188 (60%), Positives = 145/188 (77%)
 Frame = +1

Query: 37  STPSLMDTLFQRSLDDLIKGLRLHLPGPPTSNFITQNVEEIKKEIKSTDLNTKSTALHKL 216
           S+ S+MD LFQRSL+DLIKG RL L G   SNFI++ +EEI++EIKSTDL+TKSTALHKL
Sbjct: 4   SSTSIMDNLFQRSLEDLIKGFRLQLLGE--SNFISRALEEIRREIKSTDLSTKSTALHKL 61

Query: 217 TYLHSIYAINMSNWASFHAIELTSSPSFAHKKIGYLAVTMSFNSNTEVLLLLVNQLRKDL 396
           +YL +++ ++MS WA+FHA+E+ SS  F HK+IGY A+T SFN  T V+LL+ NQ+RKDL
Sbjct: 62  SYLAALHGVDMS-WAAFHAVEVVSSSRFQHKRIGYQAITQSFNDQTSVMLLITNQVRKDL 120

Query: 397 GSPCEFEVSLALETIGLVINQELAVDLIDNVFVLITSSKSFVRKKAIVTLLRVFEVYPEG 576
            S  E+EVSLALE +  +   +LA DL   VF L+ SSKSFV+KKAI  +LRVFE Y + 
Sbjct: 121 NSANEYEVSLALECLSRIGTHDLARDLTPEVFTLLASSKSFVKKKAIGVVLRVFEKYHDA 180

Query: 577 IKVCFKRL 600
           + VCFKRL
Sbjct: 181 VNVCFKRL 188


>ref|XP_003524366.1| PREDICTED: AP-3 complex subunit delta-like [Glycine max]
          Length = 916

 Score =  206 bits (524), Expect = 3e-51
 Identities = 105/185 (56%), Positives = 143/185 (77%)
 Frame = +1

Query: 46  SLMDTLFQRSLDDLIKGLRLHLPGPPTSNFITQNVEEIKKEIKSTDLNTKSTALHKLTYL 225
           S+M+ LFQR+L+DLIKG+RL L G  T  FI++  EEI++EIKSTD +TKSTALHKL+YL
Sbjct: 4   SIMENLFQRTLEDLIKGMRLQLIGEST--FISKATEEIRREIKSTDQHTKSTALHKLSYL 61

Query: 226 HSIYAINMSNWASFHAIELTSSPSFAHKKIGYLAVTMSFNSNTEVLLLLVNQLRKDLGSP 405
            +++A++MS WA FH +E+ SS  FAHK+IGY A + SF+ +T VLLL+ NQLRKDL S 
Sbjct: 62  SAVHAVDMS-WACFHVVEVMSSSKFAHKRIGYHAASQSFHDDTPVLLLITNQLRKDLSST 120

Query: 406 CEFEVSLALETIGLVINQELAVDLIDNVFVLITSSKSFVRKKAIVTLLRVFEVYPEGIKV 585
            +FEVSLAL+ +  +   +LA DL   VF L+++++ FVRKKAI  +LRVF+ YP+ ++V
Sbjct: 121 NDFEVSLALDLLSRIATLDLARDLTPEVFKLLSTARVFVRKKAIAVVLRVFDKYPDAVRV 180

Query: 586 CFKRL 600
           CFKRL
Sbjct: 181 CFKRL 185


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