BLASTX nr result

ID: Cnidium21_contig00034707 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00034707
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAO27366.1| rapid alkalinization factor 1 precursor [Populus ...   100   2e-19
ref|XP_002330157.1| predicted protein [Populus trichocarpa] gi|1...   100   2e-19
ref|XP_002321018.1| predicted protein [Populus trichocarpa] gi|2...    98   6e-19
emb|CBI26076.3| unnamed protein product [Vitis vinifera]               97   1e-18
emb|CAN83593.1| hypothetical protein VITISV_037723 [Vitis vinifera]    97   1e-18

>gb|AAO27366.1| rapid alkalinization factor 1 precursor [Populus trichocarpa x
           Populus deltoides]
          Length = 120

 Score =  100 bits (248), Expect = 2e-19
 Identities = 53/101 (52%), Positives = 67/101 (66%), Gaps = 7/101 (6%)
 Frame = -3

Query: 284 ILSALVLTAILISSSVTVAGSGD---SWIPM--KPACTGSIGECMTS--EEFEMDSESNR 126
           ++SA +L  + +  S TV GSGD    WIP      C GSI ECM    EEFEMD+E NR
Sbjct: 9   LISATILILMAMGLSSTVQGSGDHHLGWIPATRSSVCKGSIAECMAEDGEEFEMDTEINR 68

Query: 125 RILAATKFLTFEVLQNNNALCSHRGASYQNCKQGAEANLYN 3
           RILA TK++++  LQ NN  CS RGASY NC++GA+AN Y+
Sbjct: 69  RILATTKYVSYGALQRNNVPCSRRGASYYNCQRGAQANPYS 109


>ref|XP_002330157.1| predicted protein [Populus trichocarpa] gi|118484425|gb|ABK94089.1|
           unknown [Populus trichocarpa]
           gi|222871613|gb|EEF08744.1| predicted protein [Populus
           trichocarpa]
          Length = 120

 Score =  100 bits (248), Expect = 2e-19
 Identities = 53/101 (52%), Positives = 67/101 (66%), Gaps = 7/101 (6%)
 Frame = -3

Query: 284 ILSALVLTAILISSSVTVAGSGD---SWIPM--KPACTGSIGECMTS--EEFEMDSESNR 126
           ++SA +L  + +  S TV GSGD    WIP      C GSI ECM    EEFEMD+E NR
Sbjct: 9   LISATILILMAMGLSSTVQGSGDHHLGWIPATRSSVCKGSIAECMAEDGEEFEMDTEINR 68

Query: 125 RILAATKFLTFEVLQNNNALCSHRGASYQNCKQGAEANLYN 3
           RILA TK++++  LQ NN  CS RGASY NC++GA+AN Y+
Sbjct: 69  RILATTKYVSYGALQRNNVPCSRRGASYYNCQRGAQANPYS 109


>ref|XP_002321018.1| predicted protein [Populus trichocarpa] gi|222861791|gb|EEE99333.1|
           predicted protein [Populus trichocarpa]
          Length = 105

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 50/94 (53%), Positives = 68/94 (72%), Gaps = 4/94 (4%)
 Frame = -3

Query: 272 LVLTAILISSSVTVAGSGD---SWIPMKP-ACTGSIGECMTSEEFEMDSESNRRILAATK 105
           L+L+A++ISSS TV  S D   +W+P +   C G++ ECM ++EFEMDSE NRRILA + 
Sbjct: 2   LLLSALIISSS-TVDASEDHNLNWVPTRARGCQGTVAECMGNDEFEMDSEINRRILATSN 60

Query: 104 FLTFEVLQNNNALCSHRGASYQNCKQGAEANLYN 3
           +++++ L  NN  CS RGASY NCK GAEAN Y+
Sbjct: 61  YISYDALGKNNVPCSQRGASYYNCKTGAEANPYS 94


>emb|CBI26076.3| unnamed protein product [Vitis vinifera]
          Length = 152

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 56/141 (39%), Positives = 76/141 (53%), Gaps = 14/141 (9%)
 Frame = -3

Query: 386 TCFLY*RRSPWN*KKKQTDWQNET--------MTPSSVFHLTILSALVLTAILISSSVTV 231
           +C  Y  R        + DW+  T        M  SS F   +L   ++   ++ +S  V
Sbjct: 3   SCLNYKTRDMKKRTNAEGDWKFGTEEYRREAKMGNSSAF---VLICAIMAVHMVLTSSAV 59

Query: 230 AGSGD------SWIPMKPACTGSIGECMTSEEFEMDSESNRRILAATKFLTFEVLQNNNA 69
             SGD       WIP + AC GSI EC+  EEFEMDSE NRRILA+ +++++  L  N+ 
Sbjct: 60  DFSGDHLQFQLGWIPARSACQGSIAECLAGEEFEMDSEINRRILASKRYISYGALSRNSV 119

Query: 68  LCSHRGASYQNCKQGAEANLY 6
            CS RGASY NC+ GA+AN Y
Sbjct: 120 PCSRRGASYYNCRPGAQANPY 140


>emb|CAN83593.1| hypothetical protein VITISV_037723 [Vitis vinifera]
          Length = 118

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 50/109 (45%), Positives = 67/109 (61%), Gaps = 6/109 (5%)
 Frame = -3

Query: 314 MTPSSVFHLTILSALVLTAILISSSVTVAGSGD------SWIPMKPACTGSIGECMTSEE 153
           M  SS F   +L   ++   ++ +S  V  SGD       WIP + AC GSI EC+  EE
Sbjct: 1   MXNSSAF---VLICAIMAVHMVLTSSAVDFSGDHLQFQLGWIPARSACQGSIAECLAGEE 57

Query: 152 FEMDSESNRRILAATKFLTFEVLQNNNALCSHRGASYQNCKQGAEANLY 6
           FEMDSE NRRILA+ +++++  L  N+  CS RGASY NC+ GA+AN Y
Sbjct: 58  FEMDSEINRRILASKRYISYGALSRNSVPCSRRGASYYNCRPGAQANPY 106


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