BLASTX nr result

ID: Cnidium21_contig00034673 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00034673
         (350 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003548242.1| PREDICTED: cleavage and polyadenylation spec...    69   3e-10
ref|XP_003534039.1| PREDICTED: cleavage and polyadenylation spec...    69   3e-10
ref|XP_004155129.1| PREDICTED: cleavage and polyadenylation spec...    69   4e-10
ref|XP_004152876.1| PREDICTED: cleavage and polyadenylation spec...    69   4e-10
ref|XP_002318462.1| predicted protein [Populus trichocarpa] gi|2...    69   4e-10

>ref|XP_003548242.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1-like [Glycine max]
          Length = 1447

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 35/40 (87%), Positives = 36/40 (90%)
 Frame = -3

Query: 348 SFTVRDSLINVGPLKVFSYVLRINADHNATGIAKQSNYKL 229
           SF VRDSLINVGPLK FSY LRINAD NATGIAKQSNY+L
Sbjct: 497 SFAVRDSLINVGPLKDFSYGLRINADANATGIAKQSNYEL 536


>ref|XP_003534039.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1-like [Glycine max]
          Length = 1449

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 35/40 (87%), Positives = 36/40 (90%)
 Frame = -3

Query: 348 SFTVRDSLINVGPLKVFSYVLRINADHNATGIAKQSNYKL 229
           SF VRDSLINVGPLK FSY LRINAD NATGIAKQSNY+L
Sbjct: 499 SFAVRDSLINVGPLKDFSYGLRINADANATGIAKQSNYEL 538


>ref|XP_004155129.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1-like [Cucumis sativus]
          Length = 643

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 34/40 (85%), Positives = 36/40 (90%)
 Frame = -3

Query: 348 SFTVRDSLINVGPLKVFSYVLRINADHNATGIAKQSNYKL 229
           SF VRDSLIN+GPLK FSY LRINAD NATGIAKQSNY+L
Sbjct: 389 SFAVRDSLINIGPLKDFSYGLRINADPNATGIAKQSNYEL 428


>ref|XP_004152876.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
           1-like [Cucumis sativus]
          Length = 1504

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 34/40 (85%), Positives = 36/40 (90%)
 Frame = -3

Query: 348 SFTVRDSLINVGPLKVFSYVLRINADHNATGIAKQSNYKL 229
           SF VRDSLIN+GPLK FSY LRINAD NATGIAKQSNY+L
Sbjct: 553 SFAVRDSLINIGPLKDFSYGLRINADPNATGIAKQSNYEL 592


>ref|XP_002318462.1| predicted protein [Populus trichocarpa] gi|222859135|gb|EEE96682.1|
           predicted protein [Populus trichocarpa]
          Length = 1455

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 34/40 (85%), Positives = 37/40 (92%)
 Frame = -3

Query: 348 SFTVRDSLINVGPLKVFSYVLRINADHNATGIAKQSNYKL 229
           SFTVRDSLINVGPLK F+Y LRINAD NATGI+KQSNY+L
Sbjct: 507 SFTVRDSLINVGPLKDFAYGLRINADANATGISKQSNYEL 546


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