BLASTX nr result
ID: Cnidium21_contig00034673
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00034673 (350 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003548242.1| PREDICTED: cleavage and polyadenylation spec... 69 3e-10 ref|XP_003534039.1| PREDICTED: cleavage and polyadenylation spec... 69 3e-10 ref|XP_004155129.1| PREDICTED: cleavage and polyadenylation spec... 69 4e-10 ref|XP_004152876.1| PREDICTED: cleavage and polyadenylation spec... 69 4e-10 ref|XP_002318462.1| predicted protein [Populus trichocarpa] gi|2... 69 4e-10 >ref|XP_003548242.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 1-like [Glycine max] Length = 1447 Score = 69.3 bits (168), Expect = 3e-10 Identities = 35/40 (87%), Positives = 36/40 (90%) Frame = -3 Query: 348 SFTVRDSLINVGPLKVFSYVLRINADHNATGIAKQSNYKL 229 SF VRDSLINVGPLK FSY LRINAD NATGIAKQSNY+L Sbjct: 497 SFAVRDSLINVGPLKDFSYGLRINADANATGIAKQSNYEL 536 >ref|XP_003534039.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 1-like [Glycine max] Length = 1449 Score = 69.3 bits (168), Expect = 3e-10 Identities = 35/40 (87%), Positives = 36/40 (90%) Frame = -3 Query: 348 SFTVRDSLINVGPLKVFSYVLRINADHNATGIAKQSNYKL 229 SF VRDSLINVGPLK FSY LRINAD NATGIAKQSNY+L Sbjct: 499 SFAVRDSLINVGPLKDFSYGLRINADANATGIAKQSNYEL 538 >ref|XP_004155129.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 1-like [Cucumis sativus] Length = 643 Score = 68.9 bits (167), Expect = 4e-10 Identities = 34/40 (85%), Positives = 36/40 (90%) Frame = -3 Query: 348 SFTVRDSLINVGPLKVFSYVLRINADHNATGIAKQSNYKL 229 SF VRDSLIN+GPLK FSY LRINAD NATGIAKQSNY+L Sbjct: 389 SFAVRDSLINIGPLKDFSYGLRINADPNATGIAKQSNYEL 428 >ref|XP_004152876.1| PREDICTED: cleavage and polyadenylation specificity factor subunit 1-like [Cucumis sativus] Length = 1504 Score = 68.9 bits (167), Expect = 4e-10 Identities = 34/40 (85%), Positives = 36/40 (90%) Frame = -3 Query: 348 SFTVRDSLINVGPLKVFSYVLRINADHNATGIAKQSNYKL 229 SF VRDSLIN+GPLK FSY LRINAD NATGIAKQSNY+L Sbjct: 553 SFAVRDSLINIGPLKDFSYGLRINADPNATGIAKQSNYEL 592 >ref|XP_002318462.1| predicted protein [Populus trichocarpa] gi|222859135|gb|EEE96682.1| predicted protein [Populus trichocarpa] Length = 1455 Score = 68.9 bits (167), Expect = 4e-10 Identities = 34/40 (85%), Positives = 37/40 (92%) Frame = -3 Query: 348 SFTVRDSLINVGPLKVFSYVLRINADHNATGIAKQSNYKL 229 SFTVRDSLINVGPLK F+Y LRINAD NATGI+KQSNY+L Sbjct: 507 SFTVRDSLINVGPLKDFAYGLRINADANATGISKQSNYEL 546