BLASTX nr result
ID: Cnidium21_contig00034667
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00034667 (371 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABD63131.1| Retrotransposon gag protein [Asparagus officinalis] 127 1e-27 gb|ABD63157.1| Retrotransposon gag protein [Asparagus officinalis] 116 2e-24 emb|CAN72315.1| hypothetical protein VITISV_037426 [Vitis vinifera] 82 5e-14 emb|CAN69415.1| hypothetical protein VITISV_026852 [Vitis vinifera] 81 8e-14 emb|CAN64587.1| hypothetical protein VITISV_032880 [Vitis vinifera] 81 1e-13 >gb|ABD63131.1| Retrotransposon gag protein [Asparagus officinalis] Length = 321 Score = 127 bits (319), Expect = 1e-27 Identities = 58/91 (63%), Positives = 72/91 (79%) Frame = +1 Query: 97 LKDRCYPARSSQPSCITLPPVEGNNFEIKGHHINMLPKFAGREGEDPYLFIHEFEEVCAL 276 L+D CYP R++ PSCI LP V G NFE++ H INMLPKF G E ED Y+FI EFEEVC + Sbjct: 7 LQDMCYPTRNAIPSCIRLPEVNGANFELRPHFINMLPKFLGNETEDAYIFISEFEEVCIM 66 Query: 277 QKIQQLTEDSIRLRLVNFALKEDAKKWLYSL 369 K+++LTED+I+LR + FALK+ AKKWLYSL Sbjct: 67 IKMRELTEDAIKLRFIPFALKDKAKKWLYSL 97 >gb|ABD63157.1| Retrotransposon gag protein [Asparagus officinalis] Length = 279 Score = 116 bits (291), Expect = 2e-24 Identities = 52/91 (57%), Positives = 69/91 (75%) Frame = +1 Query: 97 LKDRCYPARSSQPSCITLPPVEGNNFEIKGHHINMLPKFAGREGEDPYLFIHEFEEVCAL 276 L D CYP R++ PSCI LP G +FE++ +INMLPKF G + ED Y+FI EFEEVC + Sbjct: 9 LHDMCYPIRNAIPSCIRLPETNGISFELRPQYINMLPKFLGNKTEDAYIFISEFEEVCIM 68 Query: 277 QKIQQLTEDSIRLRLVNFALKEDAKKWLYSL 369 K+++L ED+++LR + FALK+ AKKWLYSL Sbjct: 69 IKMRELNEDAVKLRFIPFALKDKAKKWLYSL 99 >emb|CAN72315.1| hypothetical protein VITISV_037426 [Vitis vinifera] Length = 635 Score = 82.0 bits (201), Expect = 5e-14 Identities = 47/103 (45%), Positives = 62/103 (60%) Frame = +1 Query: 61 GTPEPFLTMSVPLKDRCYPARSSQPSCITLPPVEGNNFEIKGHHINMLPKFAGREGEDPY 240 G P +L+M +DR YP R S PSCI +PP+E I+ H + +LP F G E E+PY Sbjct: 16 GNPNAYLSM----RDRMYPPRMSSPSCI-VPPLE--QLIIRPHIVPLLPNFHGMESENPY 68 Query: 241 LFIHEFEEVCALQKIQQLTEDSIRLRLVNFALKEDAKKWLYSL 369 I EFEEVC + + D +RL+L F LK++AK WL SL Sbjct: 69 AHIKEFEEVCNTFREGGASIDLMRLKLFPFTLKDEAKIWLNSL 111 >emb|CAN69415.1| hypothetical protein VITISV_026852 [Vitis vinifera] Length = 1073 Score = 81.3 bits (199), Expect = 8e-14 Identities = 47/103 (45%), Positives = 62/103 (60%) Frame = +1 Query: 61 GTPEPFLTMSVPLKDRCYPARSSQPSCITLPPVEGNNFEIKGHHINMLPKFAGREGEDPY 240 G P +L+M +DR +P R S PSCI LPP+E I+ H + +LP F G E E+PY Sbjct: 213 GNPNAYLSM----RDRMHPPRMSAPSCI-LPPLE--QLVIRPHIVPLLPNFHGMESENPY 265 Query: 241 LFIHEFEEVCALQKIQQLTEDSIRLRLVNFALKEDAKKWLYSL 369 I EFEEVC + + D +RL+L +F LK+ AK WL SL Sbjct: 266 AHIKEFEEVCNTFREGGASIDLMRLKLFSFTLKDKAKIWLNSL 308 >emb|CAN64587.1| hypothetical protein VITISV_032880 [Vitis vinifera] Length = 261 Score = 80.9 bits (198), Expect = 1e-13 Identities = 48/103 (46%), Positives = 62/103 (60%) Frame = +1 Query: 61 GTPEPFLTMSVPLKDRCYPARSSQPSCITLPPVEGNNFEIKGHHINMLPKFAGREGEDPY 240 G P +L+M +DR +P R S PSCI LPP+E I+ H + +LP F G E E+PY Sbjct: 100 GNPNAYLSM----RDRMHPPRMSAPSCI-LPPLE--QLVIRPHIVPLLPTFHGMESENPY 152 Query: 241 LFIHEFEEVCALQKIQQLTEDSIRLRLVNFALKEDAKKWLYSL 369 I EFEEVC + + D +RL+L FALK+ AK WL SL Sbjct: 153 SHIKEFEEVCNTFREGVASIDLMRLKLFPFALKDKAKIWLNSL 195