BLASTX nr result
ID: Cnidium21_contig00034648
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00034648 (487 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI36837.3| unnamed protein product [Vitis vinifera] 191 4e-47 ref|XP_002267393.1| PREDICTED: mismatch repair endonuclease PMS2... 181 5e-44 ref|XP_002321013.1| predicted protein [Populus trichocarpa] gi|2... 180 9e-44 emb|CAN75888.1| hypothetical protein VITISV_023640 [Vitis vinifera] 177 6e-43 ref|XP_003536886.1| PREDICTED: mismatch repair endonuclease PMS2... 176 1e-42 >emb|CBI36837.3| unnamed protein product [Vitis vinifera] Length = 854 Score = 191 bits (486), Expect = 4e-47 Identities = 99/159 (62%), Positives = 119/159 (74%) Frame = -3 Query: 482 TLNFSLKDLKSRRDQRLCRLXXXXXXXXXXXXETCYTAATLKSSQLGNIDGKXXXXXXXX 303 TL FS ++L++RR QRL RL E CY+AATL+ SQ N + K Sbjct: 561 TLQFSFEELRTRRHQRLSRLQSSSYKCGRTTTERCYSAATLEFSQPENEERKVRALAAAT 620 Query: 302 XXXERHFNKKDFGQMKVIGQFNLGFIIGKLDKDLFIVDQHAADEKYNYERLSLSTILNQQ 123 E+ F K+DFG+MKVIGQFNLGFIIGKLD+DLFIVDQHAADEKYN+E L+ ST+LNQQ Sbjct: 621 TELEKLFKKQDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFEHLAQSTVLNQQ 680 Query: 122 PLLRPMSLELAPEEEVVVTMHMDTIRKNGFALEEDLHAP 6 PLLRP+ L+L+PEEEV+ ++HMD IRKNGFALEEDLHAP Sbjct: 681 PLLRPLRLDLSPEEEVIASIHMDIIRKNGFALEEDLHAP 719 >ref|XP_002267393.1| PREDICTED: mismatch repair endonuclease PMS2-like [Vitis vinifera] Length = 937 Score = 181 bits (459), Expect = 5e-44 Identities = 95/159 (59%), Positives = 115/159 (72%) Frame = -3 Query: 482 TLNFSLKDLKSRRDQRLCRLXXXXXXXXXXXXETCYTAATLKSSQLGNIDGKXXXXXXXX 303 TL FS ++L++RR QR CY+AATL+ SQ N + K Sbjct: 662 TLQFSFEELRTRRHQR------------------CYSAATLEFSQPENEERKVRALAAAT 703 Query: 302 XXXERHFNKKDFGQMKVIGQFNLGFIIGKLDKDLFIVDQHAADEKYNYERLSLSTILNQQ 123 E+ F K+DFG+MKVIGQFNLGFIIGKLD+DLFIVDQHAADEKYN+E L+ ST+LNQQ Sbjct: 704 TELEKLFKKQDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFEHLAQSTVLNQQ 763 Query: 122 PLLRPMSLELAPEEEVVVTMHMDTIRKNGFALEEDLHAP 6 PLLRP+ L+L+PEEEV+ ++HMD IRKNGFALEEDLHAP Sbjct: 764 PLLRPLRLDLSPEEEVIASIHMDIIRKNGFALEEDLHAP 802 >ref|XP_002321013.1| predicted protein [Populus trichocarpa] gi|222861786|gb|EEE99328.1| predicted protein [Populus trichocarpa] Length = 915 Score = 180 bits (457), Expect = 9e-44 Identities = 101/159 (63%), Positives = 113/159 (71%), Gaps = 1/159 (0%) Frame = -3 Query: 482 TLNFSLKDLKSRRDQRLCRLXXXXXXXXXXXXE-TCYTAATLKSSQLGNIDGKXXXXXXX 306 TL FS +DL SRR QRL RL Y AATL+ SQ N + K Sbjct: 633 TLQFSFQDLHSRRMQRLSRLQSGKFTFGGSKRSHRSYAAATLELSQPDNEERKLRALAAA 692 Query: 305 XXXXERHFNKKDFGQMKVIGQFNLGFIIGKLDKDLFIVDQHAADEKYNYERLSLSTILNQ 126 ER F K+DFG+MKVIGQFNLGFIIGKLD+DLFIVDQHAADEKYN+ERL STILNQ Sbjct: 693 TTELERLFRKEDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFERLCQSTILNQ 752 Query: 125 QPLLRPMSLELAPEEEVVVTMHMDTIRKNGFALEEDLHA 9 QPLLRP+ LEL+PEEEVV +M++D IRKNGFALEED HA Sbjct: 753 QPLLRPLRLELSPEEEVVASMNLDIIRKNGFALEEDPHA 791 >emb|CAN75888.1| hypothetical protein VITISV_023640 [Vitis vinifera] Length = 3804 Score = 177 bits (450), Expect = 6e-43 Identities = 99/181 (54%), Positives = 118/181 (65%), Gaps = 22/181 (12%) Frame = -3 Query: 482 TLNFSLKDLKSRRDQRLCRLXXXXXXXXXXXXETCYTAATLKSSQLGNIDGKXXXXXXXX 303 TL FS ++L++RR QRL RL E CY+AATL+ SQ N + K Sbjct: 3361 TLQFSFEELRTRRHQRLSRLQSSSYKCGRTTTERCYSAATLEFSQPENEERKVRALAAAT 3420 Query: 302 XXXERHFNKKDFGQMKVIGQFNLGFIIGKLDKDLFIVDQHAADEKYNYERLSLSTILNQQ 123 E+ F K+DFG+MKVIGQFNLGFIIGKLD+DLFIVDQHAADEKYN+E L+ ST+LNQQ Sbjct: 3421 TELEKLFKKQDFGRMKVIGQFNLGFIIGKLDQDLFIVDQHAADEKYNFEHLAQSTVLNQQ 3480 Query: 122 PLLR----------------------PMSLELAPEEEVVVTMHMDTIRKNGFALEEDLHA 9 PLLR P+ L+L+PEEEV+ +HMD IRKNGFALEEDLHA Sbjct: 3481 PLLRYGVQNIHEVTSIELLCVSYTIGPLRLDLSPEEEVIAFIHMDIIRKNGFALEEDLHA 3540 Query: 8 P 6 P Sbjct: 3541 P 3541 >ref|XP_003536886.1| PREDICTED: mismatch repair endonuclease PMS2-like [Glycine max] Length = 944 Score = 176 bits (447), Expect = 1e-42 Identities = 93/158 (58%), Positives = 113/158 (71%) Frame = -3 Query: 479 LNFSLKDLKSRRDQRLCRLXXXXXXXXXXXXETCYTAATLKSSQLGNIDGKXXXXXXXXX 300 + FS ++LK RR++RL L ++CY+ ATL+ S+ + K Sbjct: 663 MQFSFQELKKRREKRLSLLQSSKFGCGKAKVKSCYSDATLELSRSEIAEQKERALAAAAT 722 Query: 299 XXERHFNKKDFGQMKVIGQFNLGFIIGKLDKDLFIVDQHAADEKYNYERLSLSTILNQQP 120 ER F K+DF +MKVIGQFNLGFII KLD+DLFIVDQHAADEKYN+ERLS STILNQQP Sbjct: 723 ELERFFKKEDFSRMKVIGQFNLGFIICKLDQDLFIVDQHAADEKYNFERLSQSTILNQQP 782 Query: 119 LLRPMSLELAPEEEVVVTMHMDTIRKNGFALEEDLHAP 6 LLRP+ LEL+PEEE+V +MHMD IRKNGF LEED +AP Sbjct: 783 LLRPIKLELSPEEEIVASMHMDIIRKNGFTLEEDPNAP 820