BLASTX nr result

ID: Cnidium21_contig00034628 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00034628
         (738 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002268030.2| PREDICTED: tyrosyl-DNA phosphodiesterase 2 [...   303   2e-80
emb|CBI23232.3| unnamed protein product [Vitis vinifera]              303   2e-80
ref|XP_002332611.1| predicted protein [Populus trichocarpa] gi|2...   277   2e-72
gb|AFK35048.1| unknown [Lotus japonicus]                              262   5e-68
ref|XP_003549775.1| PREDICTED: tyrosyl-DNA phosphodiesterase 2-l...   259   5e-67

>ref|XP_002268030.2| PREDICTED: tyrosyl-DNA phosphodiesterase 2 [Vitis vinifera]
          Length = 447

 Score =  303 bits (776), Expect = 2e-80
 Identities = 156/250 (62%), Positives = 180/250 (72%), Gaps = 5/250 (2%)
 Frame = -3

Query: 736 LTQQAQTHVSPSSSKPTWSCKSCTFHNSYRNNNCQICGTRASASLLTTLE----TDYDDE 569
           + Q   +  +PS S P WSCK+CTF N YRN  C++CGTRAS S L+  E    TD D E
Sbjct: 59  IPQSPSSSSAPSPSTPKWSCKACTFLNPYRNPICEVCGTRASVSSLSCFEDLNCTDPDGE 118

Query: 568 IDPSVGSVFLPLQRC-KRKIGQVKEMGLGGPSGSTLFAGVNVKSAKNEVAVLDKPCTNKV 392
           +D SVGSVFLPLQRC KRK     E+      GS  F GV  KSA   V  L+   ++ V
Sbjct: 119 LDSSVGSVFLPLQRCSKRKNRDPVEIDAAA-GGSGGFGGV--KSANKAVVALEDTDSDSV 175

Query: 391 LKTLKILSYNVWFREDLEMRQRMNALGDLIELHSPDIICLQEVTPNIYDIFQQSSWWKLY 212
           L +LKILSYNVWFREDLEM +RM ALGDLI+LHSPD+IC QEVTPNIYD+FQQS WWK+Y
Sbjct: 176 LSSLKILSYNVWFREDLEMDKRMQALGDLIQLHSPDLICFQEVTPNIYDVFQQSCWWKVY 235

Query: 211 KCSVSNEMAFTRAYFCMQLSKMPGNLFSCKPFRNSIMGRELCVAEVVSKEDKPLVIATSH 32
           +CSV NEMA  R YFCM LSK+P   FSCK F NSIMGRELC+AE+  +  KPLV+ATSH
Sbjct: 236 RCSVPNEMAHLRPYFCMLLSKLPVKSFSCKRFSNSIMGRELCIAELEVQAGKPLVLATSH 295

Query: 31  LESPCPGPPK 2
           LESPCP PPK
Sbjct: 296 LESPCPAPPK 305


>emb|CBI23232.3| unnamed protein product [Vitis vinifera]
          Length = 961

 Score =  303 bits (776), Expect = 2e-80
 Identities = 156/250 (62%), Positives = 180/250 (72%), Gaps = 5/250 (2%)
 Frame = -3

Query: 736  LTQQAQTHVSPSSSKPTWSCKSCTFHNSYRNNNCQICGTRASASLLTTLE----TDYDDE 569
            + Q   +  +PS S P WSCK+CTF N YRN  C++CGTRAS S L+  E    TD D E
Sbjct: 573  IPQSPSSSSAPSPSTPKWSCKACTFLNPYRNPICEVCGTRASVSSLSCFEDLNCTDPDGE 632

Query: 568  IDPSVGSVFLPLQRC-KRKIGQVKEMGLGGPSGSTLFAGVNVKSAKNEVAVLDKPCTNKV 392
            +D SVGSVFLPLQRC KRK     E+      GS  F GV  KSA   V  L+   ++ V
Sbjct: 633  LDSSVGSVFLPLQRCSKRKNRDPVEIDAAA-GGSGGFGGV--KSANKAVVALEDTDSDSV 689

Query: 391  LKTLKILSYNVWFREDLEMRQRMNALGDLIELHSPDIICLQEVTPNIYDIFQQSSWWKLY 212
            L +LKILSYNVWFREDLEM +RM ALGDLI+LHSPD+IC QEVTPNIYD+FQQS WWK+Y
Sbjct: 690  LSSLKILSYNVWFREDLEMDKRMQALGDLIQLHSPDLICFQEVTPNIYDVFQQSCWWKVY 749

Query: 211  KCSVSNEMAFTRAYFCMQLSKMPGNLFSCKPFRNSIMGRELCVAEVVSKEDKPLVIATSH 32
            +CSV NEMA  R YFCM LSK+P   FSCK F NSIMGRELC+AE+  +  KPLV+ATSH
Sbjct: 750  RCSVPNEMAHLRPYFCMLLSKLPVKSFSCKRFSNSIMGRELCIAELEVQAGKPLVLATSH 809

Query: 31   LESPCPGPPK 2
            LESPCP PPK
Sbjct: 810  LESPCPAPPK 819


>ref|XP_002332611.1| predicted protein [Populus trichocarpa] gi|222832812|gb|EEE71289.1|
           predicted protein [Populus trichocarpa]
          Length = 422

 Score =  277 bits (708), Expect = 2e-72
 Identities = 141/248 (56%), Positives = 179/248 (72%), Gaps = 13/248 (5%)
 Frame = -3

Query: 706 PSSSK----PTWSCKSCTFHNSYRNNNCQICGTRASASLLTTLE-----TDYDDEIDPSV 554
           PSSS     P WSCK+CTF N Y+N++C++CGTR S   L++LE     +  D ++D SV
Sbjct: 33  PSSSSNQETPKWSCKACTFLNPYKNSSCEVCGTRGSVFSLSSLEDLTDTSGLDGDVDSSV 92

Query: 553 GSVFLPLQRCKRKI-GQVKEMGLGGPSGSTLFAGV--NVKSAKNEVAVLDKPCTNK-VLK 386
           GSVF+PL+ CKRK+   V +       G+++  G     +++   VAVL +   +  VL 
Sbjct: 93  GSVFMPLRHCKRKVRDSVDDHQEDESDGASVKLGAFQGARASNKGVAVLTEDTNSAAVLG 152

Query: 385 TLKILSYNVWFREDLEMRQRMNALGDLIELHSPDIICLQEVTPNIYDIFQQSSWWKLYKC 206
           + KILSYNVWFREDLEM +RM ALG+LI+LHSPD+ICLQEV P+IYDIFQ+SSWWK Y+C
Sbjct: 153 SFKILSYNVWFREDLEMHRRMKALGELIQLHSPDVICLQEVIPDIYDIFQRSSWWKAYQC 212

Query: 205 SVSNEMAFTRAYFCMQLSKMPGNLFSCKPFRNSIMGRELCVAEVVSKEDKPLVIATSHLE 26
           SVS+E+A +R YFCMQLSK+P   FS KPF NSIMGRELC+AE+     K LV+ATSHLE
Sbjct: 213 SVSSEIASSRGYFCMQLSKLPVKSFSTKPFMNSIMGRELCIAELEVPGKKSLVVATSHLE 272

Query: 25  SPCPGPPK 2
           SPCP PPK
Sbjct: 273 SPCPAPPK 280


>gb|AFK35048.1| unknown [Lotus japonicus]
          Length = 467

 Score =  262 bits (670), Expect = 5e-68
 Identities = 134/247 (54%), Positives = 168/247 (68%), Gaps = 11/247 (4%)
 Frame = -3

Query: 709 SPSSSKPTWSCKSCTFHNSYRNNNCQICGTRASASLLTTLE----TDYDDEIDPSVGSVF 542
           S SSS P WSCK+CT  N Y+N+ C++CGTR+    L+       +D DD+ D SVGSVF
Sbjct: 79  SSSSSPPKWSCKACTLLNPYKNSTCELCGTRSPVLSLSNSNLLQLSDDDDDRDSSVGSVF 138

Query: 541 LPLQRCKRKIGQVKEMG------LGGPSGSTLFAGVNVKSAKNEVAVLDKPCTNKVLKT- 383
            PL+ CKRK   +                 T+   V+V S K+  + +    + K + T 
Sbjct: 139 FPLRSCKRKFDSLDHAQPSTVTTASSNKKKTIDFTVSVASGKDVASSMKILSSGKDVGTS 198

Query: 382 LKILSYNVWFREDLEMRQRMNALGDLIELHSPDIICLQEVTPNIYDIFQQSSWWKLYKCS 203
           LKILSYNVWFREDLE ++RM A+GDL+ LHSPD+IC QEVTPNIYDIF++S+WW +Y+CS
Sbjct: 199 LKILSYNVWFREDLEPQKRMKAIGDLVHLHSPDLICFQEVTPNIYDIFKKSTWWSVYQCS 258

Query: 202 VSNEMAFTRAYFCMQLSKMPGNLFSCKPFRNSIMGRELCVAEVVSKEDKPLVIATSHLES 23
           VS + A++R YFCM LSK+P   FS K F NSIMGRELC+AEV +   K LVIATSHLES
Sbjct: 259 VSADKAYSRPYFCMLLSKLPVKSFSNKSFSNSIMGRELCIAEVEAANGKSLVIATSHLES 318

Query: 22  PCPGPPK 2
           PCPGPPK
Sbjct: 319 PCPGPPK 325


>ref|XP_003549775.1| PREDICTED: tyrosyl-DNA phosphodiesterase 2-like isoform 1 [Glycine
           max]
          Length = 402

 Score =  259 bits (661), Expect = 5e-67
 Identities = 134/238 (56%), Positives = 162/238 (68%), Gaps = 2/238 (0%)
 Frame = -3

Query: 709 SPSSSKPTWSCKSCTFHNSYRNNNCQICGTRASASLLTTLETDYDD--EIDPSVGSVFLP 536
           S SSS P WSCK+CTF N Y N +C++C TR S   L+ L TD +D  + D SVGSVF P
Sbjct: 36  SCSSSPPKWSCKACTFLNPYNNPSCEVCATRCSVLSLSNL-TDLNDATDHDSSVGSVFFP 94

Query: 535 LQRCKRKIGQVKEMGLGGPSGSTLFAGVNVKSAKNEVAVLDKPCTNKVLKTLKILSYNVW 356
           L+ C       K   +     S +   +N K   + +   +   T K  K   ILSYNVW
Sbjct: 95  LRTCN------KRKAIDDDDSSEV---INFKVKPSNITGDENIDTGKAFK---ILSYNVW 142

Query: 355 FREDLEMRQRMNALGDLIELHSPDIICLQEVTPNIYDIFQQSSWWKLYKCSVSNEMAFTR 176
           FREDLE+ +RM A+GDL++LHSPD IC QEVTPNIYDIF+ S+WW +Y CSVS+EMA++R
Sbjct: 143 FREDLELHKRMKAIGDLVQLHSPDFICFQEVTPNIYDIFKGSAWWSVYCCSVSSEMAYSR 202

Query: 175 AYFCMQLSKMPGNLFSCKPFRNSIMGRELCVAEVVSKEDKPLVIATSHLESPCPGPPK 2
            YFCM LSK+P   FS KPF NSIMGRELC+AEV +   KPLVIATSHLESPCP PPK
Sbjct: 203 PYFCMLLSKLPVKSFSNKPFSNSIMGRELCIAEVEAASGKPLVIATSHLESPCPAPPK 260


Top