BLASTX nr result

ID: Cnidium21_contig00034616 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00034616
         (535 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16337.3| unnamed protein product [Vitis vinifera]               57   1e-06
ref|XP_003543456.1| PREDICTED: helicase protein MOM1-like [Glyci...    55   5e-06

>emb|CBI16337.3| unnamed protein product [Vitis vinifera]
          Length = 805

 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 50/164 (30%), Positives = 76/164 (46%), Gaps = 4/164 (2%)
 Frame = +2

Query: 2   SLLPLQHQTIPYQSSSYPLHQQHCSPNPPIEVRGHPIVEELSRLPSDVHPAPTLPPQMSR 181
           S + L +Q +    +   +HQ   +     + R  PI+  LS  P  +  AP +P +M  
Sbjct: 416 SSVELLNQAVSQSVTHLAVHQPIDTLAGGSDTRTTPIISGLSNRP--IQTAPPVPLRMPL 473

Query: 182 DITFEYGNNNLQHPMTSEALQCTPLQMELERGKQCIEQAIKIYEDMKIRLISDRDKE--- 352
                        P+ S+     PLQ ELER ++ I+Q IKI+ED K +L SD +KE   
Sbjct: 474 -------------PLHSD-----PLQNELERIRKEIDQTIKIHEDTKQQLKSDCEKEIEE 515

Query: 353 -MAELHNKYNLLFQQAELTSKSHMHDLKTRYAKICRTELLAKAF 481
            +A+L  KY+   Q  E T      +L     K+   ++LA AF
Sbjct: 516 VVAQLRGKYDAKLQDVEATFVLKKMELDINQKKVTMNKILADAF 559


>ref|XP_003543456.1| PREDICTED: helicase protein MOM1-like [Glycine max]
          Length = 200

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 32/81 (39%), Positives = 45/81 (55%)
 Frame = +2

Query: 239 LQCTPLQMELERGKQCIEQAIKIYEDMKIRLISDRDKEMAELHNKYNLLFQQAELTSKSH 418
           L   PL  EL+R ++  EQA+K YED K +L +D +KE+ EL  KY++ FQ  E+  K  
Sbjct: 14  LSYDPLNNELDRIQKVTEQAVKNYEDRKSQLKTDFEKELEELRRKYDVKFQGIEVEFKQR 73

Query: 419 MHDLKTRYAKICRTELLAKAF 481
              L T    +   + LA AF
Sbjct: 74  KTTLDTNRNVVHMNKFLAAAF 94


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