BLASTX nr result

ID: Cnidium21_contig00034609 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00034609
         (697 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFJ21663.1| F-box protein [Prunus avium]                            73   6e-11
emb|CAN90142.1| S haplotype-specific F-box protein [Prunus ceras...    72   8e-11
gb|ABE27177.1| F-box 2 [Prunus armeniaca]                              70   4e-10
dbj|BAF42767.1| S haplotype-specific F-box protein 1 [Prunus per...    70   5e-10
emb|CAN90149.1| S haplotype-specific F-box protein [Prunus dulcis]     69   9e-10

>gb|AFJ21663.1| F-box protein [Prunus avium]
          Length = 380

 Score = 72.8 bits (177), Expect = 6e-11
 Identities = 51/159 (32%), Positives = 78/159 (49%), Gaps = 6/159 (3%)
 Frame = +3

Query: 72  EYCT-FDYPLDLPASS--YAQSNGLICVSTMFDKDFDYNPDIYLWNPLVQKFRMVPETPL 242
           E+C+   +PL +      Y  SNGL+C+S   D   D    I++WNP V+KFR +P +  
Sbjct: 99  EHCSKLSHPLGIKKDYRVYGSSNGLVCIS---DDTLDTKSPIHIWNPSVRKFRTLPMSTN 155

Query: 243 PRFSFQETKWNAFAFGFLPEVNDYVVVHLVKPRSTSAPVSPEYPYDESYQLYPHSVMISV 422
           P   F   ++ A  FGF P VNDY VV +++     A                    + V
Sbjct: 156 PNVKF---RYIALQFGFHPGVNDYKVVRMLRVHKDDA------------------FAVEV 194

Query: 423 YSLNTNSWKEMCQDKVFVDRMCTDQS---VFVNGSAFWV 530
           YSL+T+SWK + +  +++   CT Q+    F NG A+ +
Sbjct: 195 YSLSTDSWKMVEEHPLWL--KCTWQNHRGTFYNGVAYHI 231


>emb|CAN90142.1| S haplotype-specific F-box protein [Prunus cerasifera]
          Length = 330

 Score = 72.4 bits (176), Expect = 8e-11
 Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 2/133 (1%)
 Frame = +3

Query: 57  NAQSQEYCTFDYPLDLPASS--YAQSNGLICVSTMFDKDFDYNPDIYLWNPLVQKFRMVP 230
           N   +EY    +PL  P     Y  SNGL+C+S   D+  +++  IY+WNP V+KFR +P
Sbjct: 77  NETFEEYFKLSHPLGSPEYFVIYGSSNGLVCIS---DEILNFDSPIYIWNPSVRKFRTIP 133

Query: 231 ETPLPRFSFQETKWNAFAFGFLPEVNDYVVVHLVKPRSTSAPVSPEYPYDESYQLYPHSV 410
            +      F    ++A  FGF P +NDY  V +++   +                   ++
Sbjct: 134 MSTNINIKF---SYDALQFGFHPRINDYKAVRMMRTNKS-------------------AL 171

Query: 411 MISVYSLNTNSWK 449
            + VYSL T+SWK
Sbjct: 172 AVEVYSLRTDSWK 184


>gb|ABE27177.1| F-box 2 [Prunus armeniaca]
          Length = 378

 Score = 70.1 bits (170), Expect = 4e-10
 Identities = 50/159 (31%), Positives = 79/159 (49%), Gaps = 6/159 (3%)
 Frame = +3

Query: 72  EYCT-FDYPLDLPASS--YAQSNGLICVSTMFDKDFDYNPDIYLWNPLVQKFRMVPETPL 242
           E+C+  ++PL +      Y  SNGL+C+S   D   D    I++WNP V+KFR +P +  
Sbjct: 99  EHCSKLNHPLGIKKDYRVYGSSNGLVCIS---DDKLDTKSPIHIWNPSVRKFRTLPMSTN 155

Query: 243 PRFSFQETKWNAFAFGFLPEVNDYVVVHLVKPRSTSAPVSPEYPYDESYQLYPHSVMISV 422
            +F     ++ A  FGF P VNDY VV +++     A                    + V
Sbjct: 156 VKF-----RYIALQFGFHPGVNDYKVVRMLRVHKDDA------------------FAVEV 192

Query: 423 YSLNTNSWKEMCQDKVFVDRMCTDQS---VFVNGSAFWV 530
           YSL+T+SWK + +  +++   CT Q+    F NG A+ +
Sbjct: 193 YSLSTDSWKMVEEHPLWL--KCTWQNHRGTFYNGVAYHI 229


>dbj|BAF42767.1| S haplotype-specific F-box protein 1 [Prunus persica]
          Length = 365

 Score = 69.7 bits (169), Expect = 5e-10
 Identities = 41/133 (30%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
 Frame = +3

Query: 57  NAQSQEYCTFDYPLDLPASS--YAQSNGLICVSTMFDKDFDYNPDIYLWNPLVQKFRMVP 230
           N   +EY    +PL  P     Y  SNGL+C+S   D+  +++  I++WNP V+KFR +P
Sbjct: 89  NETFEEYFKLSHPLGSPEYFVIYGSSNGLVCIS---DEILNFDSPIHIWNPSVRKFRTIP 145

Query: 231 ETPLPRFSFQETKWNAFAFGFLPEVNDYVVVHLVKPRSTSAPVSPEYPYDESYQLYPHSV 410
            +      F    + A  FGF P +NDY  V +++                      +++
Sbjct: 146 MSTNTNIKF---SYVALQFGFHPRINDYKAVRMMRTNK-------------------NAL 183

Query: 411 MISVYSLNTNSWK 449
            + VYSL T+SWK
Sbjct: 184 AVEVYSLRTDSWK 196


>emb|CAN90149.1| S haplotype-specific F-box protein [Prunus dulcis]
          Length = 330

 Score = 68.9 bits (167), Expect = 9e-10
 Identities = 41/133 (30%), Positives = 64/133 (48%), Gaps = 2/133 (1%)
 Frame = +3

Query: 57  NAQSQEYCTFDYPLDLPASS--YAQSNGLICVSTMFDKDFDYNPDIYLWNPLVQKFRMVP 230
           N   +EY    +PL  P     Y  SNGL+C+S   D+  +++  I++WNP V+KFR +P
Sbjct: 77  NETFEEYFKLSHPLGSPEYFVIYGSSNGLVCIS---DEILNFDSPIHIWNPSVRKFRTIP 133

Query: 231 ETPLPRFSFQETKWNAFAFGFLPEVNDYVVVHLVKPRSTSAPVSPEYPYDESYQLYPHSV 410
            +      F    + A  FGF P +NDY  V +++                      +++
Sbjct: 134 MSTNINIKF---SYVALQFGFHPRINDYKAVRMMRTNK-------------------NAL 171

Query: 411 MISVYSLNTNSWK 449
            + VYSL T+SWK
Sbjct: 172 AVEVYSLRTDSWK 184


Top