BLASTX nr result
ID: Cnidium21_contig00034608
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00034608 (450 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN79213.1| hypothetical protein VITISV_025939 [Vitis vinifera] 154 7e-36 ref|XP_003628951.1| U2-associated protein SR140 [Medicago trunca... 142 4e-32 ref|XP_002515412.1| RNA binding protein, putative [Ricinus commu... 142 4e-32 ref|XP_002308714.1| predicted protein [Populus trichocarpa] gi|2... 140 1e-31 ref|XP_002324341.1| predicted protein [Populus trichocarpa] gi|2... 135 3e-30 >emb|CAN79213.1| hypothetical protein VITISV_025939 [Vitis vinifera] Length = 1384 Score = 154 bits (389), Expect = 7e-36 Identities = 88/152 (57%), Positives = 105/152 (69%), Gaps = 3/152 (1%) Frame = -3 Query: 448 AQIHLNSVRYPGGQKETNTEMEFAGLSTLTINWEDEIQLQGKGFGLLAPTISIPQPESRA 269 AQ H NS RYP +KE E E GLS EDEIQ QGKG LAPTI IPQPE +A Sbjct: 849 AQSHSNSGRYPSSRKEIGVETESVGLSGWNRYGEDEIQSQGKGSVPLAPTIPIPQPELKA 908 Query: 268 LDTE-KNKPMLTASKWARDDNESDDERKTSTEDLGLTYSFSGNANAGEIP-KCVEMDLAT 95 + K P+L ASKWAR+D++SDDE+K S LGL+YS SG+ NAG+ P K EM+ AT Sbjct: 909 FTNKGKTDPVLPASKWAREDDDSDDEQKRSARGLGLSYSSSGSENAGDGPXKADEMEFAT 968 Query: 94 DANIAVHPDSG-INEEQRQKLRHVEVALIEYR 2 +++I PDSG +NEE RQKLR +EVALIEYR Sbjct: 969 ESSIPSQPDSGMMNEEHRQKLRRLEVALIEYR 1000 >ref|XP_003628951.1| U2-associated protein SR140 [Medicago truncatula] gi|355522973|gb|AET03427.1| U2-associated protein SR140 [Medicago truncatula] Length = 1139 Score = 142 bits (357), Expect = 4e-32 Identities = 78/156 (50%), Positives = 106/156 (67%), Gaps = 12/156 (7%) Frame = -3 Query: 433 NSVRYPG----------GQKETNTEMEFAGLSTLTINWEDEIQLQGKGFGLLAPTISIPQ 284 + ++YPG GQ+ET+ + E GLS L ++++QLQGKG+ LAPT+ IPQ Sbjct: 750 DGLKYPGNQTSSGKNSSGQRETSADPEPMGLSGLNHYGDEDLQLQGKGYAPLAPTLPIPQ 809 Query: 283 PESRAL-DTEKNKPMLTASKWARDDNESDDERKTSTEDLGLTYSFSGNANAG-EIPKCVE 110 PE +A EKN +L ASKWAR+D+ESDDE+ ++LGL+YS SG+ N G ++ K E Sbjct: 810 PELKAFAKKEKNDLVLPASKWAREDDESDDEQGKGGKNLGLSYSSSGSENVGDDLIKADE 869 Query: 109 MDLATDANIAVHPDSGINEEQRQKLRHVEVALIEYR 2 + A D++ H DSG+NEEQRQKLR +EVALIEYR Sbjct: 870 SEAAADSSFPAHADSGMNEEQRQKLRRLEVALIEYR 905 >ref|XP_002515412.1| RNA binding protein, putative [Ricinus communis] gi|223545356|gb|EEF46861.1| RNA binding protein, putative [Ricinus communis] Length = 979 Score = 142 bits (357), Expect = 4e-32 Identities = 81/152 (53%), Positives = 108/152 (71%), Gaps = 3/152 (1%) Frame = -3 Query: 448 AQIHLNSVRYPGGQKETNTEMEFAGLSTLTINWEDEIQLQGKGFGLLAPTISIPQPESRA 269 +Q HL+S ++ G++ETN E+E +S + ED++Q Q + LA T IPQ E +A Sbjct: 687 SQSHLSSSKFSSGRRETNVELE--PVSEWNVYGEDDVQSQSRASASLA-TFPIPQAELKA 743 Query: 268 LDT-EKNKPMLTASKWARDDNESDDERKTSTEDLGLTYSFSGNANAGE-IPKCV-EMDLA 98 EKN P+L ASKWARDD++SDDE+K S+ LGL+YS SG+ NAG+ + K EM+ A Sbjct: 744 FTKKEKNDPVLPASKWARDDDDSDDEQKRSSRGLGLSYSSSGSENAGDGLGKADDEMEFA 803 Query: 97 TDANIAVHPDSGINEEQRQKLRHVEVALIEYR 2 TD +I+V PDSG+NEEQRQKLR +EVALIEYR Sbjct: 804 TDGSISVQPDSGMNEEQRQKLRRLEVALIEYR 835 >ref|XP_002308714.1| predicted protein [Populus trichocarpa] gi|222854690|gb|EEE92237.1| predicted protein [Populus trichocarpa] Length = 988 Score = 140 bits (353), Expect = 1e-31 Identities = 81/151 (53%), Positives = 100/151 (66%), Gaps = 2/151 (1%) Frame = -3 Query: 448 AQIHLNSVRYPGGQKETNTEMEFAGLSTLTINWEDEIQLQGKGFGLLAPTISIPQPESRA 269 AQ + +S RY +E N + GL+ I ED+ Q K L T+ IPQPE +A Sbjct: 699 AQSNSSSSRYSSVHREVNVDPGPVGLTGWNIYGEDDTPSQNKRSVSLVSTLPIPQPELKA 758 Query: 268 L-DTEKNKPMLTASKWARDDNESDDERKTSTEDLGLTYSFSGNANAGE-IPKCVEMDLAT 95 EKN P+L ASKWARDD+ESDDE+K S DLGL+YS SG+ NAG+ K EM+ AT Sbjct: 759 FAKKEKNDPVLPASKWARDDDESDDEQKRSVRDLGLSYSSSGSENAGDGQGKEDEMEFAT 818 Query: 94 DANIAVHPDSGINEEQRQKLRHVEVALIEYR 2 DA+I P+SG+NEEQRQKLR +EVALIEYR Sbjct: 819 DASIPTQPESGMNEEQRQKLRRLEVALIEYR 849 >ref|XP_002324341.1| predicted protein [Populus trichocarpa] gi|222865775|gb|EEF02906.1| predicted protein [Populus trichocarpa] Length = 955 Score = 135 bits (340), Expect = 3e-30 Identities = 74/118 (62%), Positives = 87/118 (73%), Gaps = 2/118 (1%) Frame = -3 Query: 349 EDEIQLQGKGFGLLAPTISIPQPESRAL-DTEKNKPMLTASKWARDDNESDDERKTSTED 173 EDE+ Q KG +A T+ I QPE +A EKN P+L ASKWARDD+ESDDE+K S D Sbjct: 706 EDEMPSQNKGSVSVASTLLIKQPELKAFAKKEKNDPVLPASKWARDDDESDDEQKRSARD 765 Query: 172 LGLTYSFSGNANAGE-IPKCVEMDLATDANIAVHPDSGINEEQRQKLRHVEVALIEYR 2 LGL+YS SG+ NAG+ K EM+ ATDANI PDSG+NEEQRQKLR +EVALIEYR Sbjct: 766 LGLSYSSSGSENAGDGQGKADEMEFATDANIPTQPDSGMNEEQRQKLRRLEVALIEYR 823