BLASTX nr result

ID: Cnidium21_contig00034596 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00034596
         (322 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB02318.1| unnamed protein product [Arabidopsis thaliana]        112   3e-23
ref|NP_001189905.1| Topless-related protein 4 [Arabidopsis thali...   112   3e-23
ref|NP_188209.3| Topless-related protein 4 [Arabidopsis thaliana...   112   3e-23
ref|NP_851003.2| Topless-related protein 4 [Arabidopsis thaliana...   112   3e-23
ref|XP_002885113.1| hypothetical protein ARALYDRAFT_479043 [Arab...   112   4e-23

>dbj|BAB02318.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1128

 Score =  112 bits (280), Expect = 3e-23
 Identities = 60/109 (55%), Positives = 79/109 (72%), Gaps = 2/109 (1%)
 Frame = +2

Query: 2   SALTKHDDNNHSSKIFFEINRQRYLEALDKPDYNKVVNILTGDLKVSST-STKVIEELCL 178
           S  TK DDN +S KIFFEI +Q+YLEALDK D+ K V+IL  +LKV ST + ++ +E+ +
Sbjct: 58  SGFTKVDDNRYSMKIFFEIRKQKYLEALDKKDHAKAVDILVKELKVFSTFNEELFKEITM 117

Query: 179 LMRHSNFRDDAKFSNY-DTKQARFDFLGKLKTFTEENPIFRDKLQFPSL 322
           L+  +NFR++ + S Y DTK AR   LG+LK   E NP+FRDKLQFPSL
Sbjct: 118 LLTLTNFRENEQLSKYGDTKSARGIMLGELKKLIEANPLFRDKLQFPSL 166


>ref|NP_001189905.1| Topless-related protein 4 [Arabidopsis thaliana]
           gi|332642221|gb|AEE75742.1| Topless-related protein 4
           [Arabidopsis thaliana]
          Length = 1125

 Score =  112 bits (280), Expect = 3e-23
 Identities = 60/109 (55%), Positives = 79/109 (72%), Gaps = 2/109 (1%)
 Frame = +2

Query: 2   SALTKHDDNNHSSKIFFEINRQRYLEALDKPDYNKVVNILTGDLKVSST-STKVIEELCL 178
           S  TK DDN +S KIFFEI +Q+YLEALDK D+ K V+IL  +LKV ST + ++ +E+ +
Sbjct: 58  SGFTKVDDNRYSMKIFFEIRKQKYLEALDKKDHAKAVDILVKELKVFSTFNEELFKEITM 117

Query: 179 LMRHSNFRDDAKFSNY-DTKQARFDFLGKLKTFTEENPIFRDKLQFPSL 322
           L+  +NFR++ + S Y DTK AR   LG+LK   E NP+FRDKLQFPSL
Sbjct: 118 LLTLTNFRENEQLSKYGDTKSARGIMLGELKKLIEANPLFRDKLQFPSL 166


>ref|NP_188209.3| Topless-related protein 4 [Arabidopsis thaliana]
           gi|332642220|gb|AEE75741.1| Topless-related protein 4
           [Arabidopsis thaliana]
          Length = 1137

 Score =  112 bits (280), Expect = 3e-23
 Identities = 60/109 (55%), Positives = 79/109 (72%), Gaps = 2/109 (1%)
 Frame = +2

Query: 2   SALTKHDDNNHSSKIFFEINRQRYLEALDKPDYNKVVNILTGDLKVSST-STKVIEELCL 178
           S  TK DDN +S KIFFEI +Q+YLEALDK D+ K V+IL  +LKV ST + ++ +E+ +
Sbjct: 58  SGFTKVDDNRYSMKIFFEIRKQKYLEALDKKDHAKAVDILVKELKVFSTFNEELFKEITM 117

Query: 179 LMRHSNFRDDAKFSNY-DTKQARFDFLGKLKTFTEENPIFRDKLQFPSL 322
           L+  +NFR++ + S Y DTK AR   LG+LK   E NP+FRDKLQFPSL
Sbjct: 118 LLTLTNFRENEQLSKYGDTKSARGIMLGELKKLIEANPLFRDKLQFPSL 166


>ref|NP_851003.2| Topless-related protein 4 [Arabidopsis thaliana]
           gi|298352695|sp|Q27GK7.2|TPR4_ARATH RecName:
           Full=Topless-related protein 4; AltName:
           Full=WUS-interacting protein 2
           gi|332642219|gb|AEE75740.1| Topless-related protein 4
           [Arabidopsis thaliana]
          Length = 1135

 Score =  112 bits (280), Expect = 3e-23
 Identities = 60/109 (55%), Positives = 79/109 (72%), Gaps = 2/109 (1%)
 Frame = +2

Query: 2   SALTKHDDNNHSSKIFFEINRQRYLEALDKPDYNKVVNILTGDLKVSST-STKVIEELCL 178
           S  TK DDN +S KIFFEI +Q+YLEALDK D+ K V+IL  +LKV ST + ++ +E+ +
Sbjct: 58  SGFTKVDDNRYSMKIFFEIRKQKYLEALDKKDHAKAVDILVKELKVFSTFNEELFKEITM 117

Query: 179 LMRHSNFRDDAKFSNY-DTKQARFDFLGKLKTFTEENPIFRDKLQFPSL 322
           L+  +NFR++ + S Y DTK AR   LG+LK   E NP+FRDKLQFPSL
Sbjct: 118 LLTLTNFRENEQLSKYGDTKSARGIMLGELKKLIEANPLFRDKLQFPSL 166


>ref|XP_002885113.1| hypothetical protein ARALYDRAFT_479043 [Arabidopsis lyrata subsp.
           lyrata] gi|297330953|gb|EFH61372.1| hypothetical protein
           ARALYDRAFT_479043 [Arabidopsis lyrata subsp. lyrata]
          Length = 1136

 Score =  112 bits (279), Expect = 4e-23
 Identities = 60/109 (55%), Positives = 78/109 (71%), Gaps = 2/109 (1%)
 Frame = +2

Query: 2   SALTKHDDNNHSSKIFFEINRQRYLEALDKPDYNKVVNILTGDLKVSST-STKVIEELCL 178
           S  TK DDN +S KIFFEI +Q+YLEALDK D+ K V IL  +LKV ST + ++ +E+ +
Sbjct: 58  SGFTKVDDNRYSMKIFFEIRKQKYLEALDKKDHAKAVEILVKELKVFSTFNEELFKEITM 117

Query: 179 LMRHSNFRDDAKFSNY-DTKQARFDFLGKLKTFTEENPIFRDKLQFPSL 322
           L+  +NFR++ + S Y DTK AR   LG+LK   E NP+FRDKLQFPSL
Sbjct: 118 LLTLTNFRENEQLSKYGDTKSARGIMLGELKKLIEANPLFRDKLQFPSL 166


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