BLASTX nr result

ID: Cnidium21_contig00034593 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00034593
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002519274.1| RNA binding protein, putative [Ricinus commu...    76   2e-12
ref|XP_002512533.1| hypothetical protein RCOM_1435690 [Ricinus c...    74   1e-11
ref|XP_002277366.2| PREDICTED: uncharacterized protein LOC100266...    70   1e-10
emb|CBI39618.3| unnamed protein product [Vitis vinifera]               70   1e-10
ref|XP_003594681.1| RNA binding protein [Medicago truncatula] gi...    70   2e-10

>ref|XP_002519274.1| RNA binding protein, putative [Ricinus communis]
           gi|223541589|gb|EEF43138.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 524

 Score = 76.3 bits (186), Expect = 2e-12
 Identities = 36/92 (39%), Positives = 48/92 (52%)
 Frame = -2

Query: 281 VLSPLNKGKYLVEFLTMTTXXXXXXXXXXXXXLMMRPCPPLTQRFDQYKPLEEVDAWYRG 102
           ++  +   K LV++L + T                RPCPP       +K  E+VD W+  
Sbjct: 202 IIGTIGNDKLLVQYLNLVTDDETAPLREVISAEHARPCPPPIPSDAGFKEFEKVDVWFNE 261

Query: 101 GWSVGQVCKVFNGSKYTIYFKSTNEVLEFQHS 6
           GW  GQV +V  GSKY +YF+STNE LEF HS
Sbjct: 262 GWWEGQVSEVLPGSKYMVYFRSTNEELEFDHS 293



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 32/91 (35%), Positives = 47/91 (51%)
 Frame = -2

Query: 281 VLSPLNKGKYLVEFLTMTTXXXXXXXXXXXXXLMMRPCPPLTQRFDQYKPLEEVDAWYRG 102
           +L+ +   K+ V++  + T               +RP PP  +    Y+  E VDAWY  
Sbjct: 415 ILNVMENDKFEVKYQRLLTDDETDFLREQASASDIRPSPPHIEHDYPYRLFEMVDAWYND 474

Query: 101 GWSVGQVCKVFNGSKYTIYFKSTNEVLEFQH 9
            W VG++ KV   SKYT++FK+T E LEF H
Sbjct: 475 AWWVGRIAKVHTNSKYTVHFKTTEE-LEFGH 504


>ref|XP_002512533.1| hypothetical protein RCOM_1435690 [Ricinus communis]
           gi|223548494|gb|EEF49985.1| hypothetical protein
           RCOM_1435690 [Ricinus communis]
          Length = 363

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 34/92 (36%), Positives = 50/92 (54%)
 Frame = -2

Query: 281 VLSPLNKGKYLVEFLTMTTXXXXXXXXXXXXXLMMRPCPPLTQRFDQYKPLEEVDAWYRG 102
           ++  + K KYL+E+  + T               +RPCPP     + +K L+EVDA Y  
Sbjct: 243 IIEAVGKDKYLIEYKNLRTEDDTDFLREEIDIAHLRPCPPEIIMVNSFKLLDEVDALYND 302

Query: 101 GWSVGQVCKVFNGSKYTIYFKSTNEVLEFQHS 6
           GW VG + KV    KYT+YF+ T+E + F+HS
Sbjct: 303 GWWVGVISKVLADCKYTVYFRDTSEEMTFRHS 334


>ref|XP_002277366.2| PREDICTED: uncharacterized protein LOC100266586 [Vitis vinifera]
          Length = 296

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 35/92 (38%), Positives = 52/92 (56%)
 Frame = -2

Query: 281 VLSPLNKGKYLVEFLTMTTXXXXXXXXXXXXXLMMRPCPPLTQRFDQYKPLEEVDAWYRG 102
           ++  + K K ++E+ ++ T             L +RP PP T   D++  LEEVDA Y  
Sbjct: 183 IVKVIGKDKLMIEYKSLRTDDDTDFLREEVDALHIRPYPPETVVVDRFNLLEEVDALYND 242

Query: 101 GWSVGQVCKVFNGSKYTIYFKSTNEVLEFQHS 6
           GW VG + KV + S Y +YF+STNE ++F HS
Sbjct: 243 GWWVGVISKVLSRSCYVVYFRSTNEEMKFDHS 274


>emb|CBI39618.3| unnamed protein product [Vitis vinifera]
          Length = 315

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 35/92 (38%), Positives = 52/92 (56%)
 Frame = -2

Query: 281 VLSPLNKGKYLVEFLTMTTXXXXXXXXXXXXXLMMRPCPPLTQRFDQYKPLEEVDAWYRG 102
           ++  + K K ++E+ ++ T             L +RP PP T   D++  LEEVDA Y  
Sbjct: 202 IVKVIGKDKLMIEYKSLRTDDDTDFLREEVDALHIRPYPPETVVVDRFNLLEEVDALYND 261

Query: 101 GWSVGQVCKVFNGSKYTIYFKSTNEVLEFQHS 6
           GW VG + KV + S Y +YF+STNE ++F HS
Sbjct: 262 GWWVGVISKVLSRSCYVVYFRSTNEEMKFDHS 293


>ref|XP_003594681.1| RNA binding protein [Medicago truncatula]
           gi|355483729|gb|AES64932.1| RNA binding protein
           [Medicago truncatula]
          Length = 471

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 39/95 (41%), Positives = 49/95 (51%), Gaps = 3/95 (3%)
 Frame = -2

Query: 281 VLSPLNKGKYLVEFLTMTTXXXXXXXXXXXXXLMMRPCPPLTQRFDQYKPLEEVDAWYRG 102
           V+     GKYLVE+ T+ T               +RP PP    F +Y   E VDAWY  
Sbjct: 279 VVDLYQNGKYLVEYSTLKTDDLTQQLKEVVDVSDIRPRPPDIDHFCRYVRQEWVDAWYND 338

Query: 101 GWSVGQVCKV---FNGSKYTIYFKSTNEVLEFQHS 6
           GW  G V  V    NG KY +YF ++NEVLEF+H+
Sbjct: 339 GWWEGVVSNVGHGLNGFKYQVYFWTSNEVLEFEHN 373



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 26/58 (44%), Positives = 37/58 (63%)
 Frame = -2

Query: 179 MRPCPPLTQRFDQYKPLEEVDAWYRGGWSVGQVCKVFNGSKYTIYFKSTNEVLEFQHS 6
           +RPCPP    F  +K L+EVDAWY  GW  G V ++ N  +  + F++ NEVL+F+ S
Sbjct: 126 IRPCPPHVPMFGSFKRLQEVDAWYNDGWWEGMVVELVNSEECYVRFRN-NEVLKFESS 182