BLASTX nr result

ID: Cnidium21_contig00034591 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00034591
         (660 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633804.1| PREDICTED: RING-H2 finger protein ATL46-like...   196   3e-48
emb|CAN80445.1| hypothetical protein VITISV_043284 [Vitis vinifera]   192   4e-47
ref|XP_003543381.1| PREDICTED: RING-H2 finger protein ATL46-like...   185   6e-45
gb|ACU23678.1| unknown [Glycine max]                                  185   8e-45
gb|ACI42847.1| RING finger protein [Glycine max]                      169   6e-40

>ref|XP_003633804.1| PREDICTED: RING-H2 finger protein ATL46-like [Vitis vinifera]
          Length = 397

 Score =  196 bits (498), Expect = 3e-48
 Identities = 110/191 (57%), Positives = 124/191 (64%), Gaps = 4/191 (2%)
 Frame = -1

Query: 561 CVMSEVRYQRWLFEHTHMKVSWFKYSIKQKDEILTXXXXXXXXXXXXYGTSIAFHK---Q 391
           C MSE R  RW F HTH+K+SW ++ IKQKD  LT            Y  + AFHK    
Sbjct: 10  CSMSE-REHRWFFGHTHLKMSWIQHQIKQKDGYLTYPPPLTPSSSSPY--TAAFHKGSTA 66

Query: 390 XXXXXXXXPKINPXXXXXXXXXXXXXXISGLLHLLVRFLTKH-QTSTSSQSDRPEVSSRS 214
                    +I+P              ISGLLHLLVRFL +H  +STSSQS+R    S S
Sbjct: 67  PSSSSSSGTRISPAVLFIIVIVAVLFFISGLLHLLVRFLIRHPSSSTSSQSNRYPEISES 126

Query: 213 DALERQLQQLFHLHDSGLDQAFIDALPVFMYKEVVGSKEPFDCAVCLCEFEGDDNLRLLP 34
           DAL+RQLQQLFHLHDSGLDQAFIDALPVF+YKE+VG KEPFDCAVCLCEF   D LRLLP
Sbjct: 127 DALQRQLQQLFHLHDSGLDQAFIDALPVFLYKEIVGLKEPFDCAVCLCEFSEKDKLRLLP 186

Query: 33  KCSHAFHMECI 1
            CSHAFH+ CI
Sbjct: 187 VCSHAFHINCI 197


>emb|CAN80445.1| hypothetical protein VITISV_043284 [Vitis vinifera]
          Length = 1090

 Score =  192 bits (489), Expect = 4e-47
 Identities = 106/185 (57%), Positives = 120/185 (64%), Gaps = 4/185 (2%)
 Frame = -1

Query: 543  RYQRWLFEHTHMKVSWFKYSIKQKDEILTXXXXXXXXXXXXYGTSIAFHK---QXXXXXX 373
            R  RW F HTH+K+SW ++ IKQKD  LT            Y  + AFHK          
Sbjct: 708  REHRWFFGHTHLKMSWIQHQIKQKDGYLTYPPPLTPSSSSPY--TAAFHKGSTAPSSSSS 765

Query: 372  XXPKINPXXXXXXXXXXXXXXISGLLHLLVRFLTKH-QTSTSSQSDRPEVSSRSDALERQ 196
               +I+P              ISGLLHLLVRFL +H  +STSSQS+R    S SDAL+RQ
Sbjct: 766  SGTRISPAVLFIIVIVAVLFFISGLLHLLVRFLIRHPSSSTSSQSNRYPEISESDALQRQ 825

Query: 195  LQQLFHLHDSGLDQAFIDALPVFMYKEVVGSKEPFDCAVCLCEFEGDDNLRLLPKCSHAF 16
            LQQLFHLHDSGLDQAFIDALPVF+YKE+VG KEPFDCAVCLCEF   D LRLLP CSHAF
Sbjct: 826  LQQLFHLHDSGLDQAFIDALPVFLYKEIVGLKEPFDCAVCLCEFSEKDKLRLLPVCSHAF 885

Query: 15   HMECI 1
            H+ CI
Sbjct: 886  HINCI 890


>ref|XP_003543381.1| PREDICTED: RING-H2 finger protein ATL46-like [Glycine max]
          Length = 410

 Score =  185 bits (470), Expect = 6e-45
 Identities = 105/202 (51%), Positives = 123/202 (60%), Gaps = 17/202 (8%)
 Frame = -1

Query: 555 MSEVRYQRWLF-EHTHMKVSWFKYSIKQKDEILTXXXXXXXXXXXXYGTSIA-------- 403
           MSE  Y R LF +HTH K+ W K+ I+QKD  L+              +S +        
Sbjct: 1   MSENMYPRLLFFDHTHSKMVWVKHQIQQKDGYLSYSPPLLSSSSSSSSSSSSSSPPYPLG 60

Query: 402 --FHKQXXXXXXXXP------KINPXXXXXXXXXXXXXXISGLLHLLVRFLTKHQTSTSS 247
             FHK+        P      +I+P              ISGLLHLL+RFL KH +S S+
Sbjct: 61  ATFHKESSLPSSTPPPPPSGTRISPAVLFIIVVLAVLFFISGLLHLLIRFLIKHPSSASA 120

Query: 246 QSDRPEVSSRSDALERQLQQLFHLHDSGLDQAFIDALPVFMYKEVVGSKEPFDCAVCLCE 67
           QS+R +  S SDAL+RQLQQLFHLHDSGLDQAFIDALPVF YKE+VG KEPFDCAVCLCE
Sbjct: 121 QSNRHQELSTSDALQRQLQQLFHLHDSGLDQAFIDALPVFQYKEIVGLKEPFDCAVCLCE 180

Query: 66  FEGDDNLRLLPKCSHAFHMECI 1
           F   D LRLLP CSHAFH+ CI
Sbjct: 181 FSEKDKLRLLPMCSHAFHISCI 202


>gb|ACU23678.1| unknown [Glycine max]
          Length = 359

 Score =  185 bits (469), Expect = 8e-45
 Identities = 105/203 (51%), Positives = 123/203 (60%), Gaps = 18/203 (8%)
 Frame = -1

Query: 555 MSEVRYQRWLF-EHTHMKVSWFKYSIKQKDEILTXXXXXXXXXXXXYGTSIA-------- 403
           MSE  Y R LF +HTH K+ W K+ I+QKD  L+              +S +        
Sbjct: 1   MSENMYPRLLFFDHTHSKMVWVKHQIQQKDGYLSYSPPLLSSSSSSSSSSSSSSSPPYPL 60

Query: 402 ---FHKQXXXXXXXXP------KINPXXXXXXXXXXXXXXISGLLHLLVRFLTKHQTSTS 250
              FHK+        P      +I+P              ISGLLHLL+RFL KH +S S
Sbjct: 61  GATFHKESSLPSSTPPPPPSGTRISPAVLFIIVVLAVLFFISGLLHLLIRFLIKHPSSAS 120

Query: 249 SQSDRPEVSSRSDALERQLQQLFHLHDSGLDQAFIDALPVFMYKEVVGSKEPFDCAVCLC 70
           +QS+R +  S SDAL+RQLQQLFHLHDSGLDQAFIDALPVF YKE+VG KEPFDCAVCLC
Sbjct: 121 AQSNRHQELSTSDALQRQLQQLFHLHDSGLDQAFIDALPVFQYKEIVGLKEPFDCAVCLC 180

Query: 69  EFEGDDNLRLLPKCSHAFHMECI 1
           EF   D LRLLP CSHAFH+ CI
Sbjct: 181 EFSEKDKLRLLPMCSHAFHISCI 203


>gb|ACI42847.1| RING finger protein [Glycine max]
          Length = 392

 Score =  169 bits (427), Expect = 6e-40
 Identities = 94/182 (51%), Positives = 110/182 (60%), Gaps = 16/182 (8%)
 Frame = -1

Query: 498 WFKYSIKQKDEILTXXXXXXXXXXXXYGTSIA----------FHKQXXXXXXXXP----- 364
           W K+ I+QKD  L+              +S +          FHK+        P     
Sbjct: 3   WVKHQIQQKDGYLSYSPPLLSSSSSSSSSSSSSSPPYPLGATFHKESSLPSSTPPPPPSG 62

Query: 363 -KINPXXXXXXXXXXXXXXISGLLHLLVRFLTKHQTSTSSQSDRPEVSSRSDALERQLQQ 187
            +I+P              ISGLLHLL+RFL KH +S S+QS+R +  S SDAL+RQLQQ
Sbjct: 63  TRISPAVLFIIVVLAVLFFISGLLHLLIRFLIKHPSSASAQSNRHQELSTSDALQRQLQQ 122

Query: 186 LFHLHDSGLDQAFIDALPVFMYKEVVGSKEPFDCAVCLCEFEGDDNLRLLPKCSHAFHME 7
           LFHLHDSGLDQAFIDALPVF YKE+VG KEPFDCAVCLCEF   D LRLLP CSHAFH+ 
Sbjct: 123 LFHLHDSGLDQAFIDALPVFQYKEIVGLKEPFDCAVCLCEFSEKDKLRLLPMCSHAFHIS 182

Query: 6   CI 1
           CI
Sbjct: 183 CI 184


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