BLASTX nr result
ID: Cnidium21_contig00034590
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00034590
(398 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003631786.1| PREDICTED: pentatricopeptide repeat-containi... 155 3e-36
emb|CAN63320.1| hypothetical protein VITISV_026425 [Vitis vinifera] 155 3e-36
ref|XP_002516609.1| pentatricopeptide repeat-containing protein,... 135 3e-30
ref|NP_001173982.1| Os04g0475800 [Oryza sativa Japonica Group] g... 101 7e-20
gb|EEE61183.1| hypothetical protein OsJ_15176 [Oryza sativa Japo... 101 7e-20
>ref|XP_003631786.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
mitochondrial-like [Vitis vinifera]
Length = 629
Score = 155 bits (392), Expect = 3e-36
Identities = 78/132 (59%), Positives = 96/132 (72%)
Frame = +2
Query: 2 SHNQILWALCKCGQLSNALAFFGSLEKKGVVHNESSYTALIYGFCGARLWEDTFRCLALM 181
S+N ILWALCKCGQ ALA SL+K G VHN +SYTAL+YGF LWE+ F L M
Sbjct: 117 SYNPILWALCKCGQSYTALALLYSLKKMGAVHNAASYTALVYGFSKEGLWEEAFCMLDEM 176
Query: 182 EILGRKPNVKTYTVVVKFLCDDGKIKEALCLLNKMNEEGCFPDLVTFNILLRELCHQDML 361
+I G KPNV TYTV+VKFLCD+G+I +AL +L KM +EGC PD+VT+N++LREL HQD
Sbjct: 177 KIDGCKPNVITYTVIVKFLCDEGRIGDALDILGKMGKEGCDPDIVTYNVILRELFHQDRY 236
Query: 362 GMMYALLGHINQ 397
+ LL I+Q
Sbjct: 237 VEIGELLQVIDQ 248
Score = 63.9 bits (154), Expect = 1e-08
Identities = 41/126 (32%), Positives = 59/126 (46%)
Frame = +2
Query: 2 SHNQILWALCKCGQLSNALAFFGSLEKKGVVHNESSYTALIYGFCGARLWEDTFRCLALM 181
S+N IL C+ + AL F E + S+ ++ C R L M
Sbjct: 327 SYNTILNGFCRENHIDEALQLFDHFEWANNSPDVVSFNTILSAACKQGNSSMIRRVLYRM 386
Query: 182 EILGRKPNVKTYTVVVKFLCDDGKIKEALCLLNKMNEEGCFPDLVTFNILLRELCHQDML 361
E G K NV + T ++++ C GKI E L LL M G P +VTFN+LL +LC +L
Sbjct: 387 EYEGVKLNVVSSTCLIQYFCAIGKISECLELLESMIRNGLNPTVVTFNMLLDKLCKNGLL 446
Query: 362 GMMYAL 379
G + +
Sbjct: 447 GTAHRI 452
>emb|CAN63320.1| hypothetical protein VITISV_026425 [Vitis vinifera]
Length = 722
Score = 155 bits (392), Expect = 3e-36
Identities = 78/132 (59%), Positives = 96/132 (72%)
Frame = +2
Query: 2 SHNQILWALCKCGQLSNALAFFGSLEKKGVVHNESSYTALIYGFCGARLWEDTFRCLALM 181
S+N ILWALCKCGQ ALA SL+K G VHN +SYTAL+YGF LWE+ F L M
Sbjct: 225 SYNPILWALCKCGQSYTALALLYSLKKMGAVHNAASYTALVYGFSKEGLWEEAFCMLDEM 284
Query: 182 EILGRKPNVKTYTVVVKFLCDDGKIKEALCLLNKMNEEGCFPDLVTFNILLRELCHQDML 361
+I G KPNV TYTV+VKFLCD+G+I +AL +L KM +EGC PD+VT+N++LREL HQD
Sbjct: 285 KIDGCKPNVITYTVIVKFLCDEGRIGDALDILGKMGKEGCDPDIVTYNVILRELFHQDRY 344
Query: 362 GMMYALLGHINQ 397
+ LL I+Q
Sbjct: 345 VEIGELLQVIDQ 356
Score = 63.9 bits (154), Expect = 1e-08
Identities = 41/126 (32%), Positives = 59/126 (46%)
Frame = +2
Query: 2 SHNQILWALCKCGQLSNALAFFGSLEKKGVVHNESSYTALIYGFCGARLWEDTFRCLALM 181
S+N IL C+ + AL F E + S+ ++ C R L M
Sbjct: 435 SYNTILNGFCRENHIDEALQLFDHFEWANNSPDVVSFNTILSAACKQGNSSMIRRVLYRM 494
Query: 182 EILGRKPNVKTYTVVVKFLCDDGKIKEALCLLNKMNEEGCFPDLVTFNILLRELCHQDML 361
E G K NV + T ++++ C GKI E L LL M G P +VTFN+LL +LC +L
Sbjct: 495 EYEGVKLNVVSSTCLIQYFCAIGKISECLELLESMIRNGLNPTVVTFNMLLDKLCKNGLL 554
Query: 362 GMMYAL 379
G + +
Sbjct: 555 GTAHRI 560
>ref|XP_002516609.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223544429|gb|EEF45950.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 463
Score = 135 bits (341), Expect = 3e-30
Identities = 65/128 (50%), Positives = 89/128 (69%), Gaps = 4/128 (3%)
Frame = +2
Query: 8 NQILWALCKCGQLSNALAFFGSLEKKGVVHNESSYTALIYGFCGARLWEDTFRCLALMEI 187
N ILWA CK + AL F S++K+GVV+N SYTAL+YGFC L ED RCL M
Sbjct: 119 NPILWAFCKINETRTALQLFCSMKKRGVVYNVCSYTALVYGFCTEGLVEDALRCLDGMRG 178
Query: 188 LGRKPNVKTYTVVVKFLCDDGKIKEALCLLNKMNEEGCFPDLVTFNILLRELCHQ----D 355
+G K +V TYTVV+KFLCD +I +A+ +L +M EGC PDL+T+N++LRE+C+Q D
Sbjct: 179 IGCKASVITYTVVIKFLCDARRIDDAMRILGEMEREGCDPDLLTYNVILREVCYQGRVTD 238
Query: 356 MLGMMYAL 379
+ G++Y +
Sbjct: 239 IFGLIYVM 246
>ref|NP_001173982.1| Os04g0475800 [Oryza sativa Japonica Group]
gi|255675551|dbj|BAH92710.1| Os04g0475800 [Oryza sativa
Japonica Group]
Length = 568
Score = 101 bits (251), Expect = 7e-20
Identities = 52/119 (43%), Positives = 71/119 (59%)
Frame = +2
Query: 5 HNQILWALCKCGQLSNALAFFGSLEKKGVVHNESSYTALIYGFCGARLWEDTFRCLALME 184
+NQIL+ LCK G + AL F +L+K+G+ N SYTAL+ G C ++W D +R L M
Sbjct: 230 YNQILFGLCKSGCSNKALTLFCNLKKRGLSLNVYSYTALVLGLCKEKMWADAYRALEKMC 289
Query: 185 ILGRKPNVKTYTVVVKFLCDDGKIKEALCLLNKMNEEGCFPDLVTFNILLRELCHQDML 361
KP+V TYTV+V FLC DGKI A+ + + GC D N+LL LC +D +
Sbjct: 290 DEECKPSVVTYTVIVNFLCRDGKIDAAMHVFRMACKNGCCLDSTICNVLLHALCCEDRI 348
>gb|EEE61183.1| hypothetical protein OsJ_15176 [Oryza sativa Japonica Group]
Length = 545
Score = 101 bits (251), Expect = 7e-20
Identities = 52/119 (43%), Positives = 71/119 (59%)
Frame = +2
Query: 5 HNQILWALCKCGQLSNALAFFGSLEKKGVVHNESSYTALIYGFCGARLWEDTFRCLALME 184
+NQIL+ LCK G + AL F +L+K+G+ N SYTAL+ G C ++W D +R L M
Sbjct: 230 YNQILFGLCKSGCSNKALTLFCNLKKRGLSLNVYSYTALVLGLCKEKMWADAYRALEKMC 289
Query: 185 ILGRKPNVKTYTVVVKFLCDDGKIKEALCLLNKMNEEGCFPDLVTFNILLRELCHQDML 361
KP+V TYTV+V FLC DGKI A+ + + GC D N+LL LC +D +
Sbjct: 290 DEECKPSVVTYTVIVNFLCRDGKIDAAMHVFRMACKNGCCLDSTICNVLLHALCCEDRI 348