BLASTX nr result

ID: Cnidium21_contig00034583 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00034583
         (414 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAM64828.1| hypothetical protein [Beta vulgaris]                  105   4e-21
gb|ABN05718.1| FAR1; Zinc finger, SWIM-type [Medicago truncatula]     101   5e-20
ref|XP_002464927.1| hypothetical protein SORBIDRAFT_01g028975 [S...    94   9e-18
ref|XP_002466124.1| hypothetical protein SORBIDRAFT_01g001853 [S...    94   1e-17
ref|XP_002438240.1| hypothetical protein SORBIDRAFT_10g010346 [S...    92   6e-17

>dbj|BAM64828.1| hypothetical protein [Beta vulgaris]
          Length = 1296

 Score =  105 bits (262), Expect = 4e-21
 Identities = 51/112 (45%), Positives = 73/112 (65%)
 Frame = +1

Query: 79   NRCGCPAKIILRLVCGMIYRITTFVEKHNHDLVPKNARQFLRVSRQMSSISRKFVFDAAN 258
            NR GC A+I LR      + +  F E HNH      +  FL+ SR ++   +KF+FD + 
Sbjct: 1168 NRAGCQARIGLRKRSDGKFMVYLFHESHNHVFATPKSMHFLKNSRNLTLAHKKFIFDNSR 1227

Query: 259  VNIGVSKSHRLIKEMVGGYANVGATVREFRNFSRDLKAYVGERDAQMIIDKF 414
            +N+G +KS RLIKE VGGY NVGA++ +F+NFSRD+KAY+ + DA M ++ F
Sbjct: 1228 LNVGPNKSFRLIKEHVGGYENVGASLVDFKNFSRDVKAYIQDVDADMFVNNF 1279


>gb|ABN05718.1| FAR1; Zinc finger, SWIM-type [Medicago truncatula]
          Length = 800

 Score =  101 bits (252), Expect = 5e-20
 Identities = 45/111 (40%), Positives = 71/111 (63%)
 Frame = +1

Query: 82  RCGCPAKIILRLVCGMIYRITTFVEKHNHDLVPKNARQFLRVSRQMSSISRKFVFDAANV 261
           R GC A+++L+      Y ++ F E H+H LV  + RQFLR +R ++S+ +  +F     
Sbjct: 171 REGCKARLVLKRTIDGKYEVSNFYEGHSHGLVSPSKRQFLRSARNVTSVHKNILFSCNRA 230

Query: 262 NIGVSKSHRLIKEMVGGYANVGATVREFRNFSRDLKAYVGERDAQMIIDKF 414
           N+G SKS++++KE VG Y N+G T R+ +N+SR+LK  + + DA M ID F
Sbjct: 231 NVGTSKSYQIMKEQVGSYENIGCTQRDLQNYSRNLKELIKDSDADMFIDNF 281


>ref|XP_002464927.1| hypothetical protein SORBIDRAFT_01g028975 [Sorghum bicolor]
           gi|241918781|gb|EER91925.1| hypothetical protein
           SORBIDRAFT_01g028975 [Sorghum bicolor]
          Length = 471

 Score = 94.4 bits (233), Expect = 9e-18
 Identities = 42/108 (38%), Positives = 72/108 (66%)
 Frame = +1

Query: 82  RCGCPAKIILRLVCGMIYRITTFVEKHNHDLVPKNARQFLRVSRQMSSISRKFVFDAANV 261
           RCGC A+I+++L     Y+I +FVE+HNH  +  + R  LR +RQ+S  ++  +F+    
Sbjct: 269 RCGCQARIVVKLDSEKKYQILSFVEEHNHGFMSPDKRHLLRSNRQVSERAKSTLFNCHKA 328

Query: 262 NIGVSKSHRLIKEMVGGYANVGATVREFRNFSRDLKAYVGERDAQMII 405
           +IG S++ RL++   GG+ +VG T+R+F+N+ RDL+  + + DAQM +
Sbjct: 329 SIGTSQAFRLLQVTDGGFEHVGCTLRDFKNYYRDLRCRIKDADAQMFV 376


>ref|XP_002466124.1| hypothetical protein SORBIDRAFT_01g001853 [Sorghum bicolor]
           gi|241919978|gb|EER93122.1| hypothetical protein
           SORBIDRAFT_01g001853 [Sorghum bicolor]
          Length = 205

 Score = 93.6 bits (231), Expect = 1e-17
 Identities = 42/108 (38%), Positives = 71/108 (65%)
 Frame = +1

Query: 82  RCGCPAKIILRLVCGMIYRITTFVEKHNHDLVPKNARQFLRVSRQMSSISRKFVFDAANV 261
           RCGC A+I+++L     Y I +FVE+HNH  V  + R  LR +R++S  ++  +F+    
Sbjct: 73  RCGCAARIVVKLDSEKKYEILSFVEEHNHGFVSPDKRHLLRSNRRVSGRAKSTLFNCHKA 132

Query: 262 NIGVSKSHRLIKEMVGGYANVGATVREFRNFSRDLKAYVGERDAQMII 405
           +IG S++ RL++   GG+ +VG T+R+F+N+ RDL+  + + DAQM +
Sbjct: 133 SIGTSQAFRLLQVTDGGFQHVGCTLRDFKNYYRDLRTKIKDADAQMFV 180


>ref|XP_002438240.1| hypothetical protein SORBIDRAFT_10g010346 [Sorghum bicolor]
           gi|241916463|gb|EER89607.1| hypothetical protein
           SORBIDRAFT_10g010346 [Sorghum bicolor]
          Length = 261

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 41/111 (36%), Positives = 71/111 (63%)
 Frame = +1

Query: 82  RCGCPAKIILRLVCGMIYRITTFVEKHNHDLVPKNARQFLRVSRQMSSISRKFVFDAANV 261
           RCGC A+I+++L     YRI +FVE+HNH  V  + +  LR +R +S   +  +F+    
Sbjct: 129 RCGCQARIVVKLGSDKKYRILSFVEEHNHGFVSPDKKHLLRSNRHVSERVKSTLFNCHKA 188

Query: 262 NIGVSKSHRLIKEMVGGYANVGATVREFRNFSRDLKAYVGERDAQMIIDKF 414
           +IG+S++ RL+    GG+ NVG T+R+ +N+ RD ++ + + DA+M + +F
Sbjct: 189 SIGMSQTFRLLHVSDGGFENVGCTLRDLKNYYRDSRSKIKDADAEMFVHQF 239


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