BLASTX nr result

ID: Cnidium21_contig00034575 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00034575
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279438.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   115   5e-24
ref|XP_004164344.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   100   1e-19
ref|XP_004147701.1| PREDICTED: 31 kDa ribonucleoprotein, chlorop...   100   1e-19
ref|XP_002531981.1| Protein gar2, putative [Ricinus communis] gi...   100   1e-19
ref|NP_001240173.1| uncharacterized protein LOC100814693 [Glycin...    99   5e-19

>ref|XP_002279438.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic [Vitis vinifera]
           gi|296086279|emb|CBI31720.3| unnamed protein product
           [Vitis vinifera]
          Length = 415

 Score =  115 bits (287), Expect = 5e-24
 Identities = 60/93 (64%), Positives = 70/93 (75%)
 Frame = +3

Query: 3   RFGEDKETKEFRGYAHVDFTDSLYVTMALKLDQKILCGRPVRIRCAVPAKKADPNAKVVP 182
           RFG DKET+EFRGYAHVDF+D+  +TMALKLDQ+I+CGRP +IRCAVP K A   +   P
Sbjct: 306 RFGMDKETQEFRGYAHVDFSDNPSLTMALKLDQEIVCGRPAKIRCAVPKKGAKDYSTPAP 365

Query: 183 TSRIAENLEEKSDAVDTSAGSGKLKRRTCYECG 281
           +S  AEN     D   TS GSGK+KRRTCYECG
Sbjct: 366 SSEKAEN-----DGGLTS-GSGKMKRRTCYECG 392


>ref|XP_004164344.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Cucumis
           sativus]
          Length = 432

 Score =  100 bits (249), Expect = 1e-19
 Identities = 56/101 (55%), Positives = 65/101 (64%), Gaps = 8/101 (7%)
 Frame = +3

Query: 3   RFGEDKETKEFRGYAHVDFTDSLYVTMALKLDQKILCGRPVRIRCAVPAKKAD------- 161
           RFG DKET EFRGYAHVDF+D + +  ALKLDQKI+ GRPV+IRCAVP K  +       
Sbjct: 312 RFGMDKETGEFRGYAHVDFSDGISLKTALKLDQKIIHGRPVKIRCAVPKKGTENGGGGAV 371

Query: 162 PNAKVVPTSRIAENLEEKSDAVD-TSAGSGKLKRRTCYECG 281
             A+  P        E K  AV   SA SGK++RRTCYECG
Sbjct: 372 AGAETHPEMNPEPIPETKEAAVSVVSAVSGKIRRRTCYECG 412


>ref|XP_004147701.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Cucumis
           sativus]
          Length = 432

 Score =  100 bits (249), Expect = 1e-19
 Identities = 56/101 (55%), Positives = 65/101 (64%), Gaps = 8/101 (7%)
 Frame = +3

Query: 3   RFGEDKETKEFRGYAHVDFTDSLYVTMALKLDQKILCGRPVRIRCAVPAKKAD------- 161
           RFG DKET EFRGYAHVDF+D + +  ALKLDQKI+ GRPV+IRCAVP K  +       
Sbjct: 312 RFGMDKETGEFRGYAHVDFSDGISLKTALKLDQKIIHGRPVKIRCAVPKKGTENGGGGAV 371

Query: 162 PNAKVVPTSRIAENLEEKSDAVD-TSAGSGKLKRRTCYECG 281
             A+  P        E K  AV   SA SGK++RRTCYECG
Sbjct: 372 AGAETHPEMNPEPIPETKEAAVSVVSAVSGKIRRRTCYECG 412


>ref|XP_002531981.1| Protein gar2, putative [Ricinus communis]
           gi|223528378|gb|EEF30417.1| Protein gar2, putative
           [Ricinus communis]
          Length = 436

 Score =  100 bits (249), Expect = 1e-19
 Identities = 49/92 (53%), Positives = 65/92 (70%)
 Frame = +3

Query: 3   RFGEDKETKEFRGYAHVDFTDSLYVTMALKLDQKILCGRPVRIRCAVPAKKADPNAKVVP 182
           R+G DKET EFRGY HV+F+D+L + MALKLDQ+I+CGR ++I CAVP K A  +A   P
Sbjct: 308 RWGTDKETGEFRGYGHVEFSDNLSLLMALKLDQQIVCGRAIKISCAVPMKGAKVHATAAP 367

Query: 183 TSRIAENLEEKSDAVDTSAGSGKLKRRTCYEC 278
           T+        ++D  + S  SGK++RRTCYEC
Sbjct: 368 TA-----TGNEADNGELSTVSGKMRRRTCYEC 394


>ref|NP_001240173.1| uncharacterized protein LOC100814693 [Glycine max]
           gi|255644669|gb|ACU22837.1| unknown [Glycine max]
          Length = 411

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 53/102 (51%), Positives = 65/102 (63%), Gaps = 9/102 (8%)
 Frame = +3

Query: 3   RFGEDKETKEFRGYAHVDFTDSLYVTMALKLDQKILCGRPVRIRCAVPAKK--ADPNAKV 176
           RFG DKET EFRGYAHVDF+DS  +  AL LDQ +L GRPVRI CAVP KK      +  
Sbjct: 290 RFGMDKETGEFRGYAHVDFSDSQSLKTALALDQNVLFGRPVRISCAVPLKKKTGTHTSST 349

Query: 177 V-------PTSRIAENLEEKSDAVDTSAGSGKLKRRTCYECG 281
           V       P+S  ++ ++       +S GSGK++RRTCYECG
Sbjct: 350 VNGANGDKPSSTGSDRIDGADGDKPSSTGSGKMRRRTCYECG 391


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