BLASTX nr result

ID: Cnidium21_contig00034558 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00034558
         (495 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK42885.1| unknown [Lotus japonicus]                              108   3e-22
gb|AFB77178.1| ATPase subunit 9 (mitochondrion) [Daucus carota s...    78   7e-13
gb|AFB77177.1| ATPase subunit 9 (mitochondrion) [Daucus carota s...    77   2e-12
emb|CAA08795.1| F0-F1 ATPase subunit 9 [Daucus carota] gi|157051...    70   2e-10
gb|AFB77179.1| ATPase subunit 9 (mitochondrion) [Daucus carota s...    68   7e-10

>gb|AFK42885.1| unknown [Lotus japonicus]
          Length = 90

 Score =  108 bits (271), Expect = 3e-22
 Identities = 48/78 (61%), Positives = 58/78 (74%)
 Frame = -3

Query: 388 IHYVRRCKINRCRSCYNCFGGSCYWNWKRFQFFDSFCSTQSIIGKTIIWLCHFRLCADRG 209
           I  VRRCKINRCRSCYNCF GSC   WKR QF +SF   +SIIGK +I +C+  LC++RG
Sbjct: 10  IRDVRRCKINRCRSCYNCFSGSCCRYWKRIQFINSFRGKKSIIGKAVIRICNPGLCSNRG 69

Query: 208 YCIVCSNDGFFDLICILN 155
           YC+V  NDG FD +C L+
Sbjct: 70  YCLVRINDGLFDSLCFLS 87


>gb|AFB77178.1| ATPase subunit 9 (mitochondrion) [Daucus carota subsp. carota]
           gi|377823794|gb|AFB77183.1| ATPase subunit 9
           (mitochondrion) [Daucus carota subsp. carota]
           gi|377823796|gb|AFB77184.1| ATPase subunit 9
           (mitochondrion) [Daucus carota subsp. carota]
          Length = 88

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 44/62 (70%), Positives = 44/62 (70%)
 Frame = -1

Query: 306 NVFSSLIHSVARNPSLAKQLFGYAILGFALTEXXXXXXXXXXXXXXXXXXIQNRVYISNI 127
           NVFSSLIHSVARNPSLAKQLFGYAILGFALTE                  IQNRVYISNI
Sbjct: 26  NVFSSLIHSVARNPSLAKQLFGYAILGFALTEAIALFALMMAFLILSVFQIQNRVYISNI 85

Query: 126 VS 121
           VS
Sbjct: 86  VS 87


>gb|AFB77177.1| ATPase subunit 9 (mitochondrion) [Daucus carota subsp. carota]
           gi|377823790|gb|AFB77181.1| ATPase subunit 9
           (mitochondrion) [Daucus carota subsp. carota]
          Length = 88

 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 43/62 (69%), Positives = 44/62 (70%)
 Frame = -1

Query: 306 NVFSSLIHSVARNPSLAKQLFGYAILGFALTEXXXXXXXXXXXXXXXXXXIQNRVYISNI 127
           NVFSSLIHSVARNPSLAKQLFGYAILGFALTE                  I+NRVYISNI
Sbjct: 26  NVFSSLIHSVARNPSLAKQLFGYAILGFALTEAIALFALMMAFLILSVFQIKNRVYISNI 85

Query: 126 VS 121
           VS
Sbjct: 86  VS 87


>emb|CAA08795.1| F0-F1 ATPase subunit 9 [Daucus carota] gi|15705135|gb|AAK00525.1|
           ATPase9 [Daucus carota]
          Length = 89

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 39/57 (68%), Positives = 39/57 (68%)
 Frame = -1

Query: 306 NVFSSLIHSVARNPSLAKQLFGYAILGFALTEXXXXXXXXXXXXXXXXXXIQNRVYI 136
           NVFSSLIHSVARNPSLAKQLFGYAILGFALTE                  IQNRVYI
Sbjct: 26  NVFSSLIHSVARNPSLAKQLFGYAILGFALTEAIALFALMMAFLILSVFQIQNRVYI 82


>gb|AFB77179.1| ATPase subunit 9 (mitochondrion) [Daucus carota subsp. carota]
           gi|377823792|gb|AFB77182.1| ATPase subunit 9
           (mitochondrion) [Daucus carota subsp. carota]
          Length = 89

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 37/57 (64%), Positives = 39/57 (68%)
 Frame = -1

Query: 306 NVFSSLIHSVARNPSLAKQLFGYAILGFALTEXXXXXXXXXXXXXXXXXXIQNRVYI 136
           NVFSSLIHSVARNPSLAKQLFGYAILGFALTE                  ++NRVYI
Sbjct: 26  NVFSSLIHSVARNPSLAKQLFGYAILGFALTEAIALFALMMAFLILSVFQMKNRVYI 82


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