BLASTX nr result

ID: Cnidium21_contig00034555 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00034555
         (281 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002309474.1| predicted protein [Populus trichocarpa] gi|2...   110   9e-23
dbj|BAK61858.1| mechanosensitive ion channel domain-containing p...   103   2e-20
ref|XP_002516120.1| conserved hypothetical protein [Ricinus comm...   102   2e-20
dbj|BAK61859.1| mechanosensitive ion channel domain-containing p...   101   7e-20
ref|NP_196769.1| mechanosensitive channel of small conductance-l...    98   6e-19

>ref|XP_002309474.1| predicted protein [Populus trichocarpa] gi|222855450|gb|EEE92997.1|
           predicted protein [Populus trichocarpa]
          Length = 622

 Score =  110 bits (276), Expect = 9e-23
 Identities = 57/93 (61%), Positives = 64/93 (68%)
 Frame = +2

Query: 2   GSKYIDEQDLRRFMLREEVDFVFPLIDVAETGQVDRKALTEWVVKVYNGRKALAHALNDT 181
           G KYIDE+DL RFM++EEVD VFPL +  ETG+VDRKALT WVV+VYNGRKALAH+LNDT
Sbjct: 416 GCKYIDEEDLLRFMIKEEVDLVFPLFEGYETGRVDRKALTNWVVRVYNGRKALAHSLNDT 475

Query: 182 KTAVNQXXXXXXXXXXXXXXXXXXXXXEIATTK 280
           KTAV Q                     EIATTK
Sbjct: 476 KTAVKQLHKLVTGILVILTIVIWLLMMEIATTK 508


>dbj|BAK61858.1| mechanosensitive ion channel domain-containing protein [Citrus
           unshiu]
          Length = 777

 Score =  103 bits (256), Expect = 2e-20
 Identities = 49/65 (75%), Positives = 57/65 (87%)
 Frame = +2

Query: 5   SKYIDEQDLRRFMLREEVDFVFPLIDVAETGQVDRKALTEWVVKVYNGRKALAHALNDTK 184
           SKYI+E+DL RFM++EEVD VFPLI+  + GQ+DRKALT+WVVKVYN RKALAHAL DTK
Sbjct: 482 SKYIEEEDLLRFMIKEEVDLVFPLIEGWDKGQIDRKALTDWVVKVYNDRKALAHALTDTK 541

Query: 185 TAVNQ 199
           TAV Q
Sbjct: 542 TAVKQ 546


>ref|XP_002516120.1| conserved hypothetical protein [Ricinus communis]
           gi|223544606|gb|EEF46122.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 762

 Score =  102 bits (255), Expect = 2e-20
 Identities = 52/93 (55%), Positives = 60/93 (64%)
 Frame = +2

Query: 2   GSKYIDEQDLRRFMLREEVDFVFPLIDVAETGQVDRKALTEWVVKVYNGRKALAHALNDT 181
           G KYIDE DL RFM++EEVD V PL + +E GQ+DRK+LT+WVVKVY  RKALAHAL DT
Sbjct: 466 GWKYIDEDDLLRFMIKEEVDLVLPLFEASENGQIDRKSLTDWVVKVYKDRKALAHALGDT 525

Query: 182 KTAVNQXXXXXXXXXXXXXXXXXXXXXEIATTK 280
           KTAV Q                     E+ATTK
Sbjct: 526 KTAVKQLNKLVTGILIIVTIVIWLLLIEVATTK 558


>dbj|BAK61859.1| mechanosensitive ion channel domain-containing protein [Citrus
           unshiu]
          Length = 694

 Score =  101 bits (251), Expect = 7e-20
 Identities = 51/93 (54%), Positives = 62/93 (66%)
 Frame = +2

Query: 2   GSKYIDEQDLRRFMLREEVDFVFPLIDVAETGQVDRKALTEWVVKVYNGRKALAHALNDT 181
           GSKYI+E+DL RFM++EEVD VFPLI+  E G++D+KALT WV+K+Y  RKAL HAL+DT
Sbjct: 398 GSKYIEEEDLLRFMIKEEVDLVFPLIEGWENGRIDKKALTNWVLKIYKDRKALGHALDDT 457

Query: 182 KTAVNQXXXXXXXXXXXXXXXXXXXXXEIATTK 280
           KTAV Q                     EIATTK
Sbjct: 458 KTAVKQLNKLVTGILIVVTILVWLLLSEIATTK 490


>ref|NP_196769.1| mechanosensitive channel of small conductance-like 10 [Arabidopsis
           thaliana] gi|30683939|ref|NP_850810.1| mechanosensitive
           channel of small conductance-like 10 [Arabidopsis
           thaliana] gi|186522320|ref|NP_001119212.1|
           mechanosensitive channel of small conductance-like 10
           [Arabidopsis thaliana]
           gi|75181076|sp|Q9LYG9.1|MSL10_ARATH RecName:
           Full=Mechanosensitive ion channel protein 10; AltName:
           Full=Mechanosensitive channel of small conductance-like
           10; AltName: Full=MscS-Like protein 10; Short=AtMSL10
           gi|7573373|emb|CAB87679.1| putative protein [Arabidopsis
           thaliana] gi|9759375|dbj|BAB10026.1| unnamed protein
           product [Arabidopsis thaliana]
           gi|18700073|gb|AAL77649.1| AT5g12080/MXC9_3 [Arabidopsis
           thaliana] gi|25090179|gb|AAN72247.1| At5g12080/MXC9_3
           [Arabidopsis thaliana] gi|227204347|dbj|BAH57025.1|
           AT5G12080 [Arabidopsis thaliana]
           gi|332004376|gb|AED91759.1| mechanosensitive channel of
           small conductance-like 10 [Arabidopsis thaliana]
           gi|332004377|gb|AED91760.1| mechanosensitive channel of
           small conductance-like 10 [Arabidopsis thaliana]
           gi|332004378|gb|AED91761.1| mechanosensitive channel of
           small conductance-like 10 [Arabidopsis thaliana]
          Length = 734

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 51/91 (56%), Positives = 60/91 (65%), Gaps = 1/91 (1%)
 Frame = +2

Query: 11  YIDEQDLRRFMLREEVDFVFPLID-VAETGQVDRKALTEWVVKVYNGRKALAHALNDTKT 187
           YI+E+DL RFM++EEVD VFPL D  AETG++ RKA TEWVVKVY  R+ALAH+LNDTKT
Sbjct: 449 YIEEEDLLRFMIKEEVDLVFPLFDGAAETGRITRKAFTEWVVKVYTSRRALAHSLNDTKT 508

Query: 188 AVNQXXXXXXXXXXXXXXXXXXXXXEIATTK 280
           AV Q                     E+ATTK
Sbjct: 509 AVKQLNKLVTAILMVVTVVIWLLLLEVATTK 539


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