BLASTX nr result
ID: Cnidium21_contig00034531
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Cnidium21_contig00034531 (694 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_004141068.1| PREDICTED: 40S ribosomal protein S3-3-like [... 57 8e-08 ref|XP_004141698.1| PREDICTED: 40S ribosomal protein S3-3-like [... 56 8e-08 gb|ACF06499.1| ribosomal protein [Elaeis guineensis] 56 8e-08 ref|XP_002516123.1| 40S ribosomal protein S3, putative [Ricinus ... 56 8e-08 ref|XP_002324195.1| predicted protein [Populus trichocarpa] gi|1... 56 8e-08 >ref|XP_004141068.1| PREDICTED: 40S ribosomal protein S3-3-like [Cucumis sativus] gi|449488075|ref|XP_004157933.1| PREDICTED: 40S ribosomal protein S3-3-like [Cucumis sativus] Length = 243 Score = 57.4 bits (137), Expect(2) = 8e-08 Identities = 27/32 (84%), Positives = 28/32 (87%) Frame = -2 Query: 279 CQVIVSGKLRAQREKSMKFKDSYMISYGQPAR 184 C+VIVSGKLRAQR KSMKFKD YMIS GQP R Sbjct: 134 CEVIVSGKLRAQRAKSMKFKDGYMISSGQPVR 165 Score = 25.0 bits (53), Expect(2) = 8e-08 Identities = 11/14 (78%), Positives = 13/14 (92%) Frame = -1 Query: 187 QEYIVSAVRHVLLR 146 ++YI SAVRHVLLR Sbjct: 165 RDYIDSAVRHVLLR 178 >ref|XP_004141698.1| PREDICTED: 40S ribosomal protein S3-3-like [Cucumis sativus] gi|449521735|ref|XP_004167885.1| PREDICTED: 40S ribosomal protein S3-3-like [Cucumis sativus] Length = 236 Score = 56.2 bits (134), Expect(2) = 8e-08 Identities = 26/32 (81%), Positives = 28/32 (87%) Frame = -2 Query: 279 CQVIVSGKLRAQREKSMKFKDSYMISYGQPAR 184 C+VIVSGKLRAQR KSMKFKD YMIS GQP + Sbjct: 134 CEVIVSGKLRAQRAKSMKFKDGYMISSGQPVK 165 Score = 26.2 bits (56), Expect(2) = 8e-08 Identities = 12/14 (85%), Positives = 13/14 (92%) Frame = -1 Query: 187 QEYIVSAVRHVLLR 146 +EYI SAVRHVLLR Sbjct: 165 KEYIDSAVRHVLLR 178 >gb|ACF06499.1| ribosomal protein [Elaeis guineensis] Length = 235 Score = 56.2 bits (134), Expect(2) = 8e-08 Identities = 26/32 (81%), Positives = 28/32 (87%) Frame = -2 Query: 279 CQVIVSGKLRAQREKSMKFKDSYMISYGQPAR 184 C+VIVSGKLRAQR KSMKFKD YMIS GQP + Sbjct: 134 CEVIVSGKLRAQRAKSMKFKDGYMISCGQPVK 165 Score = 26.2 bits (56), Expect(2) = 8e-08 Identities = 12/14 (85%), Positives = 13/14 (92%) Frame = -1 Query: 187 QEYIVSAVRHVLLR 146 +EYI SAVRHVLLR Sbjct: 165 KEYIDSAVRHVLLR 178 >ref|XP_002516123.1| 40S ribosomal protein S3, putative [Ricinus communis] gi|223544609|gb|EEF46125.1| 40S ribosomal protein S3, putative [Ricinus communis] Length = 234 Score = 56.2 bits (134), Expect(2) = 8e-08 Identities = 26/32 (81%), Positives = 28/32 (87%) Frame = -2 Query: 279 CQVIVSGKLRAQREKSMKFKDSYMISYGQPAR 184 C+VIVSGKLRAQR KSMKFKD YMIS GQP + Sbjct: 134 CEVIVSGKLRAQRAKSMKFKDGYMISSGQPVK 165 Score = 26.2 bits (56), Expect(2) = 8e-08 Identities = 12/14 (85%), Positives = 13/14 (92%) Frame = -1 Query: 187 QEYIVSAVRHVLLR 146 +EYI SAVRHVLLR Sbjct: 165 KEYIDSAVRHVLLR 178 >ref|XP_002324195.1| predicted protein [Populus trichocarpa] gi|118483222|gb|ABK93514.1| unknown [Populus trichocarpa] gi|118487214|gb|ABK95435.1| unknown [Populus trichocarpa] gi|222865629|gb|EEF02760.1| predicted protein [Populus trichocarpa] Length = 234 Score = 56.2 bits (134), Expect(2) = 8e-08 Identities = 26/32 (81%), Positives = 28/32 (87%) Frame = -2 Query: 279 CQVIVSGKLRAQREKSMKFKDSYMISYGQPAR 184 C+VIVSGKLRAQR KSMKFKD YMIS GQP + Sbjct: 134 CEVIVSGKLRAQRAKSMKFKDGYMISSGQPVK 165 Score = 26.2 bits (56), Expect(2) = 8e-08 Identities = 12/14 (85%), Positives = 13/14 (92%) Frame = -1 Query: 187 QEYIVSAVRHVLLR 146 +EYI SAVRHVLLR Sbjct: 165 KEYIDSAVRHVLLR 178