BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00034512
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271825.2| PREDICTED: pentatricopeptide repeat-containi...   197   6e-49
ref|XP_002515645.1| pentatricopeptide repeat-containing protein,...   189   2e-46
ref|XP_003544342.1| PREDICTED: pentatricopeptide repeat-containi...   182   2e-44
ref|XP_003544044.1| PREDICTED: pentatricopeptide repeat-containi...   182   2e-44
ref|XP_002317794.1| predicted protein [Populus trichocarpa] gi|2...   176   2e-42

>ref|XP_002271825.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g13600-like [Vitis vinifera]
          Length = 702

 Score =  197 bits (502), Expect = 6e-49
 Identities = 91/143 (63%), Positives = 118/143 (82%)
 Frame = +3

Query: 3   LMHDSVATNSFTLGSVLSACTDMGLIRLGKEIHSHAIVRGLQSNPFVGGSLVEMYSKFQD 182
           LM + +  +SFTLGSVL+AC DM  +R GKE+H+ A+VRGL  N FVGG+LVEMYSK +D
Sbjct: 268 LMEEGIEADSFTLGSVLAACADMASLRRGKEVHAQAVVRGLHWNTFVGGALVEMYSKCED 327

Query: 183 LKSARISFNEVNERDMATWNALVSGYSRCNQIENIQVSLQEMREDGFEPNVYTWNGIIAG 362
           LK+A+++F+ V ERD ATWN L+SGY+ CNQ+ENIQ  +Q+M+ DGFEPNVYTWNGII+G
Sbjct: 328 LKAAQLAFDGVTERDTATWNVLISGYACCNQLENIQNLIQKMKGDGFEPNVYTWNGIISG 387

Query: 363 HVENGCHELALEMFSQMHTSDLQ 431
           HVENG +ELAL +F++M TS L+
Sbjct: 388 HVENGHNELALRLFTEMQTSSLR 410



 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 36/133 (27%), Positives = 72/133 (54%)
 Frame = +3

Query: 15  SVATNSFTLGSVLSACTDMGLIRLGKEIHSHAIVRGLQSNPFVGGSLVEMYSKFQDLKSA 194
           S+  + +T+G +L AC  +  I  GK++H+H+I +G + +  +G +LV+MY+K   +K A
Sbjct: 408 SLRPDIYTVGIILPACARLATIARGKQVHAHSIRQGYELDVHIGAALVDMYAKCGSIKHA 467

Query: 195 RISFNEVNERDMATWNALVSGYSRCNQIENIQVSLQEMREDGFEPNVYTWNGIIAGHVEN 374
              +N ++  ++ + NA+++ Y+     +      + M  +GF P+  T+  +++  V  
Sbjct: 468 MQVYNRISNPNLVSQNAMLTAYAMHGHGDEGIALFRNMLGNGFRPDHVTFLSVLSSCVHA 527

Query: 375 GCHELALEMFSQM 413
           G  E   E F  M
Sbjct: 528 GAVETGHEFFDLM 540


>ref|XP_002515645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223545188|gb|EEF46697.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 758

 Score =  189 bits (480), Expect = 2e-46
 Identities = 88/143 (61%), Positives = 116/143 (81%)
 Frame = +3

Query: 3   LMHDSVATNSFTLGSVLSACTDMGLIRLGKEIHSHAIVRGLQSNPFVGGSLVEMYSKFQD 182
           L+ + +  +SFTLGSVL+AC D   +R GKEIHS+AIV+ LQSN FVGG+L+EMYSK QD
Sbjct: 274 LLKEGIEPDSFTLGSVLTACADTASLRQGKEIHSYAIVKSLQSNTFVGGALIEMYSKCQD 333

Query: 183 LKSARISFNEVNERDMATWNALVSGYSRCNQIENIQVSLQEMREDGFEPNVYTWNGIIAG 362
             +A++ FNEV ERD  TWN L+S Y+RCNQ E I+  LQ+M+EDGFEPN+YTWNGI+AG
Sbjct: 334 PMAAQLVFNEVIERDAPTWNVLISCYARCNQNEEIRNLLQKMQEDGFEPNIYTWNGILAG 393

Query: 363 HVENGCHELALEMFSQMHTSDLQ 431
           +VENG  +LA+++FS+MHT D++
Sbjct: 394 YVENGHLDLAMQLFSEMHTGDVR 416



 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 33/123 (26%), Positives = 68/123 (55%)
 Frame = +3

Query: 18  VATNSFTLGSVLSACTDMGLIRLGKEIHSHAIVRGLQSNPFVGGSLVEMYSKFQDLKSAR 197
           V  + FT+G +L AC+ +  +  GK++H+H+I     S+  +G  LV+MY+K   L+ A+
Sbjct: 415 VRPDIFTVGIILPACSKLATLERGKQVHAHSIRCYYDSDVHIGAGLVDMYAKCGSLQYAQ 474

Query: 198 ISFNEVNERDMATWNALVSGYSRCNQIENIQVSLQEMREDGFEPNVYTWNGIIAGHVENG 377
           ++++ ++  ++   N +++ Y+     E      + +R  GF+P+  T+  ++A  V  G
Sbjct: 475 LAYSRISNHNLVCHNVMLTAYAMHGYGEEGIALFRTIRATGFQPDNVTFLSVLASCVHAG 534

Query: 378 CHE 386
             E
Sbjct: 535 LVE 537


>ref|XP_003544342.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Glycine max]
          Length = 551

 Score =  182 bits (463), Expect = 2e-44
 Identities = 86/143 (60%), Positives = 115/143 (80%)
 Frame = +3

Query: 3   LMHDSVATNSFTLGSVLSACTDMGLIRLGKEIHSHAIVRGLQSNPFVGGSLVEMYSKFQD 182
           L+ + +  +SFTLGSVL+ C DM  IR GKE HS AIVRGLQSN  VGG+LVEMYSK QD
Sbjct: 260 LLKEGIEPDSFTLGSVLAGCADMASIRRGKEAHSLAIVRGLQSNSIVGGALVEMYSKCQD 319

Query: 183 LKSARISFNEVNERDMATWNALVSGYSRCNQIENIQVSLQEMREDGFEPNVYTWNGIIAG 362
           + +A+++F+ V+ERD+ TWNAL+SGY+RCNQ E I+   Q+MR DGFEPNVYTWNGIIAG
Sbjct: 320 IVAAQMAFDGVSERDLPTWNALISGYARCNQAEKIRELHQKMRRDGFEPNVYTWNGIIAG 379

Query: 363 HVENGCHELALEMFSQMHTSDLQ 431
           +VEN  ++ A+++F++M  ++L+
Sbjct: 380 YVENKQYDSAMQLFTEMQIANLR 402



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 34/130 (26%), Positives = 71/130 (54%)
 Frame = +3

Query: 33  FTLGSVLSACTDMGLIRLGKEIHSHAIVRGLQSNPFVGGSLVEMYSKFQDLKSARISFNE 212
           +T+G +L+AC+ +  I+ GK++H+++I  G  S+  +G +LV+MY+K  D+K     +N 
Sbjct: 406 YTVGIILAACSRLATIQRGKQVHAYSIRAGHDSDVHIGAALVDMYAKCGDVKHCYRVYNM 465

Query: 213 VNERDMATWNALVSGYSRCNQIENIQVSLQEMREDGFEPNVYTWNGIIAGHVENGCHELA 392
           ++  ++ + NA+++ Y+     E      + M      P+  T+  +++  V  G  E+ 
Sbjct: 466 ISNPNLVSHNAMLTAYAMHGHGEEGIALFRRMLASKVRPDHVTFLAVLSSCVHAGSLEIG 525

Query: 393 LEMFSQMHTS 422
            E  + M +S
Sbjct: 526 HECLALMASS 535


>ref|XP_003544044.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Glycine max]
          Length = 688

 Score =  182 bits (463), Expect = 2e-44
 Identities = 86/143 (60%), Positives = 115/143 (80%)
 Frame = +3

Query: 3   LMHDSVATNSFTLGSVLSACTDMGLIRLGKEIHSHAIVRGLQSNPFVGGSLVEMYSKFQD 182
           L+ + +  +SFTLGSVL+ C DM  IR GKE HS AIVRGLQSN  VGG+LVEMYSK QD
Sbjct: 260 LLKEGIEPDSFTLGSVLAGCADMASIRRGKEAHSLAIVRGLQSNSIVGGALVEMYSKCQD 319

Query: 183 LKSARISFNEVNERDMATWNALVSGYSRCNQIENIQVSLQEMREDGFEPNVYTWNGIIAG 362
           + +A+++F+ V+ERD+ TWNAL+SGY+RCNQ E I+   Q+MR DGFEPNVYTWNGIIAG
Sbjct: 320 IVAAQMAFDGVSERDLPTWNALISGYARCNQAEKIRELHQKMRRDGFEPNVYTWNGIIAG 379

Query: 363 HVENGCHELALEMFSQMHTSDLQ 431
           +VEN  ++ A+++F++M  ++L+
Sbjct: 380 YVENKQYDSAMQLFTEMQIANLR 402



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 33/127 (25%), Positives = 69/127 (54%)
 Frame = +3

Query: 33  FTLGSVLSACTDMGLIRLGKEIHSHAIVRGLQSNPFVGGSLVEMYSKFQDLKSARISFNE 212
           +T+G +L+AC+ +  I+ GK++H+++I  G  S+  +G +LV+MY+K  D+K     +N 
Sbjct: 406 YTVGIILAACSRLATIQRGKQVHAYSIRAGHDSDVHIGAALVDMYAKCGDVKHCYRVYNM 465

Query: 213 VNERDMATWNALVSGYSRCNQIENIQVSLQEMREDGFEPNVYTWNGIIAGHVENGCHELA 392
           ++  ++ + NA+++ Y+     E      + M      P+  T+  +++  V  G  E+ 
Sbjct: 466 ISNPNLVSHNAMLTAYAMHGHGEEGIALFRRMLASKVRPDHVTFLAVLSSCVHAGSLEIG 525

Query: 393 LEMFSQM 413
            E  + M
Sbjct: 526 HECLALM 532


>ref|XP_002317794.1| predicted protein [Populus trichocarpa] gi|222858467|gb|EEE96014.1|
           predicted protein [Populus trichocarpa]
          Length = 852

 Score =  176 bits (445), Expect = 2e-42
 Identities = 83/143 (58%), Positives = 113/143 (79%)
 Frame = +3

Query: 3   LMHDSVATNSFTLGSVLSACTDMGLIRLGKEIHSHAIVRGLQSNPFVGGSLVEMYSKFQD 182
           LM + +  +SFTLGSVL+AC D   +R GKEIH+ AIV+GLQS+ FVGG+LVEMYSK QD
Sbjct: 425 LMEEGIEPDSFTLGSVLTACADTISLRQGKEIHAQAIVKGLQSDTFVGGALVEMYSKCQD 484

Query: 183 LKSARISFNEVNERDMATWNALVSGYSRCNQIENIQVSLQEMREDGFEPNVYTWNGIIAG 362
           L +A+++F+EV E+D+ TWNAL+SGY+R NQIE IQ  L++M+ DG+ PN+YTWN I+AG
Sbjct: 485 LTAAQVAFDEVMEKDVPTWNALISGYTRSNQIERIQYLLEKMKGDGYHPNIYTWNSILAG 544

Query: 363 HVENGCHELALEMFSQMHTSDLQ 431
            VEN   +L +++FS+M  S L+
Sbjct: 545 LVENRQLDLTMQLFSEMQISKLR 567



 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 43/143 (30%), Positives = 72/143 (50%), Gaps = 1/143 (0%)
 Frame = +3

Query: 3   LMHDSVATNSFTLGSVLSACTDMGLIRLGKEIHSHAIVRGLQSNPFVGGSLVEMYSKFQD 182
           L  D V  + F    V  AC+ +G + LG+++H   I      N +V  +L++MY K   
Sbjct: 151 LQFDGVELDFFVFPLVFKACSGLGSVELGRQLHGLVIKFRFCLNIYVSNALIDMYGKCGS 210

Query: 183 LKSARISFNEVNERDMATWNALVSGYSRCNQIENIQVSLQEMRE-DGFEPNVYTWNGIIA 359
           L  A+    ++ ERD  TWN++++  +    +      L++M+  D   PNV +W+ +I 
Sbjct: 211 LDDAKKVLVKMPERDSVTWNSVITACAANGMVYEALEFLEKMKSLDYSMPNVVSWSAVIG 270

Query: 360 GHVENGCHELALEMFSQMHTSDL 428
           G  +NG  E A+EM  +M    L
Sbjct: 271 GFAQNGYDEEAIEMLFRMQVEGL 293



 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 38/134 (28%), Positives = 66/134 (49%)
 Frame = +3

Query: 12  DSVATNSFTLGSVLSACTDMGLIRLGKEIHSHAIVRGLQSNPFVGGSLVEMYSKFQDLKS 191
           + +  N+ TL  VL AC  +  + LGK++H +       SNP V  +LV++Y +  D+  
Sbjct: 291 EGLVPNAQTLAGVLPACARLQRLDLGKQLHGYITRHDFISNPVVVNALVDVYRRCGDMGG 350

Query: 192 ARISFNEVNERDMATWNALVSGYSRCNQIENIQVSLQEMREDGFEPNVYTWNGIIAGHVE 371
           A   F + + +++ + N ++ GY     +   +     M   G E  + +WN II+G+V 
Sbjct: 351 AAKIFLKFSVKNVLSCNTMIVGYCESGDVSKAKELFDCMDVLGIERGLISWNSIISGYVR 410

Query: 372 NGCHELALEMFSQM 413
           N   + A  MF  M
Sbjct: 411 NFMFDEAFSMFQNM 424



 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 35/127 (27%), Positives = 69/127 (54%)
 Frame = +3

Query: 33  FTLGSVLSACTDMGLIRLGKEIHSHAIVRGLQSNPFVGGSLVEMYSKFQDLKSARISFNE 212
           +T+G +L AC+ +  +  GK+ H+H+I  G  ++  +G +LV+MY+K   LK A+++++ 
Sbjct: 571 YTVGIILPACSRLATLERGKQAHAHSIKCGYDTDVHIGAALVDMYAKCGSLKYAQLAYDR 630

Query: 213 VNERDMATWNALVSGYSRCNQIENIQVSLQEMREDGFEPNVYTWNGIIAGHVENGCHELA 392
           ++  ++ + NA+++  +     E      Q M   GF P+  T+  +++  V  G  E  
Sbjct: 631 ISNPNLVSHNAMLTACAMHGHGEEGISLFQTMLALGFIPDHVTFLSVLSSCVHVGSVETG 690

Query: 393 LEMFSQM 413
            E F  M
Sbjct: 691 CEFFDLM 697



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 31/111 (27%), Positives = 57/111 (51%)
 Frame = +3

Query: 12  DSVATNSFTLGSVLSACTDMGLIRLGKEIHSHAIVRGLQSNPFVGGSLVEMYSKFQDLKS 191
           D+   N+    SVL +C      +LGK++H+H I  G  ++ F+   L++MY++   LK 
Sbjct: 56  DNKPLNTSKYASVLDSCK---CPKLGKQVHAHTIKTGFDADGFIDTKLLQMYARCGLLKD 112

Query: 192 ARISFNEVNERDMATWNALVSGYSRCNQIENIQVSLQEMREDGFEPNVYTW 344
           A   F  +  R++ +W A++S Y      E   +  Q ++ DG E + + +
Sbjct: 113 ADFLFETMPMRNLHSWKAILSVYLDHGLFEEAFLLFQVLQFDGVELDFFVF 163