BLASTX nr result

ID: Cnidium21_contig00034505 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00034505
         (576 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD48963.1|AF147263_5 contains similarity to transposases [Ar...   147   2e-33
gb|AAF19546.1|AC007190_14 F23N19.13 [Arabidopsis thaliana]            137   1e-30
gb|AAF79835.1|AC026875_15 T6D22.19 [Arabidopsis thaliana]             135   4e-30
gb|AAD24567.1|AF120335_1 putative transposase [Arabidopsis thali...   134   8e-30
emb|CAN80126.1| hypothetical protein VITISV_013417 [Vitis vinifera]   131   9e-29

>gb|AAD48963.1|AF147263_5 contains similarity to transposases [Arabidopsis thaliana]
           gi|7267311|emb|CAB81093.1| AT4g05510 [Arabidopsis
           thaliana]
          Length = 604

 Score =  147 bits (370), Expect = 2e-33
 Identities = 74/172 (43%), Positives = 113/172 (65%), Gaps = 6/172 (3%)
 Frame = -3

Query: 538 DVLEIYRKGKERFTLALESVP--VSLTFDLWFSEKADGYLLLRANFVDENWILQSRMLNL 365
           DV++ + K K+     LE +P  + LT D W S   DGY++L A++VD  WIL S++L+ 
Sbjct: 145 DVVKTWEKEKQILKSELERIPSRICLTSDCWTSLGGDGYIVLTAHYVDTRWILNSKILSF 204

Query: 364 KFIPPPHEGPLLAEKVIDLLEEWGIKKKLFTLTLNDASTNNG----LVDVVRNHFNLLRE 197
             + PPH G  LA K+ + L+EWGI+KK+FTLTL++A+ NN     L+D ++   NL+ +
Sbjct: 205 SDMLPPHTGDALASKIHECLKEWGIEKKVFTLTLDNATANNSMQEVLIDRLKLDNNLMCK 264

Query: 196 GEYFHIRCGAQILNSSAQIVLELIQNCVIKVRQSVKYVKGTKERLLIFTKCV 41
           GE+FH+RC A +LN   Q  L++I + + K+R++VKYVKG+  R L   +CV
Sbjct: 265 GEFFHVRCCAHVLNRIVQNGLDVISDALSKIRETVKYVKGSTSRRLALAECV 316


>gb|AAF19546.1|AC007190_14 F23N19.13 [Arabidopsis thaliana]
          Length = 633

 Score =  137 bits (345), Expect = 1e-30
 Identities = 67/188 (35%), Positives = 120/188 (63%), Gaps = 4/188 (2%)
 Frame = -3

Query: 571 VQHISQHIVKDDVLEIYRKGKERFTLALESVP--VSLTFDLWFSEKADGYLLLRANFVDE 398
           ++  S++    DV +IY + K +    L  +P  + LT DLW +   + Y+ L A++VD 
Sbjct: 154 IEFWSRNTAASDVYKIYEREKIKLKEKLAIIPGRICLTTDLWRALTVESYICLTAHYVDV 213

Query: 397 NWILQSRMLNLKFIPPPHEGPLLAEKVIDLLEEWGIKKKLFTLTLNDASTNNGLVDVVRN 218
           + +L++++L+    PPPH G  +A K+ +LL++WGI+KK+FTLT+++AS N+ +  +++ 
Sbjct: 214 DGVLKTKILSFSAFPPPHSGVAIAMKLSELLKDWGIEKKIFTLTVDNASANDTMQSILKR 273

Query: 217 HF--NLLREGEYFHIRCGAQILNSSAQIVLELIQNCVIKVRQSVKYVKGTKERLLIFTKC 44
               +L+  GE+FH+RC A ILN   Q  LE+I   + K+R++VKYVKG++ R  +F  C
Sbjct: 274 KLQKDLVCSGEFFHVRCSAHILNLIVQDGLEVISGALEKIRETVKYVKGSETRENLFQNC 333

Query: 43  VAQLSLKS 20
           +  + +++
Sbjct: 334 MDTIGIQT 341


>gb|AAF79835.1|AC026875_15 T6D22.19 [Arabidopsis thaliana]
          Length = 745

 Score =  135 bits (341), Expect = 4e-30
 Identities = 67/188 (35%), Positives = 120/188 (63%), Gaps = 4/188 (2%)
 Frame = -3

Query: 571 VQHISQHIVKDDVLEIYRKGKERFTLALESVP--VSLTFDLWFSEKADGYLLLRANFVDE 398
           ++  S++    DV +IY + K +    L  +P  + LT DLW +   + Y+ L A++VD 
Sbjct: 244 IEFWSRNTAASDVYKIYEREKIKLKEKLAIIPGRICLTTDLWRALTVESYICLTAHYVDV 303

Query: 397 NWILQSRMLNLKFIPPPHEGPLLAEKVIDLLEEWGIKKKLFTLTLNDASTNNGLVDVVRN 218
           + +L++++L+    PPPH G  +A K+ +LL++WGI+KK+FTLT+++AS N+ +  +++ 
Sbjct: 304 DGVLKTKILSFCAFPPPHSGVAIAMKLSELLKDWGIEKKVFTLTVDNASANDTMQSILKR 363

Query: 217 HF--NLLREGEYFHIRCGAQILNSSAQIVLELIQNCVIKVRQSVKYVKGTKERLLIFTKC 44
               +L+  GE+FH+RC A ILN   Q  LE+I   + K+R++VKYVKG++ R  +F  C
Sbjct: 364 KLQKHLVCSGEFFHVRCSAHILNLIVQDGLEVISGALEKIRETVKYVKGSETRENLFQNC 423

Query: 43  VAQLSLKS 20
           +  + +++
Sbjct: 424 MDTIGIQT 431


>gb|AAD24567.1|AF120335_1 putative transposase [Arabidopsis thaliana]
          Length = 577

 Score =  134 bits (338), Expect = 8e-30
 Identities = 67/188 (35%), Positives = 120/188 (63%), Gaps = 4/188 (2%)
 Frame = -3

Query: 571 VQHISQHIVKDDVLEIYRKGKERFTLALESVP--VSLTFDLWFSEKADGYLLLRANFVDE 398
           ++  S++    DV +IY + K +    L  +P  + LT DLW +   + Y+ L A++VD 
Sbjct: 61  IEFWSRNTAAFDVYKIYEREKIKLKEKLAIIPGRICLTTDLWRALTVESYICLTAHYVDV 120

Query: 397 NWILQSRMLNLKFIPPPHEGPLLAEKVIDLLEEWGIKKKLFTLTLNDASTNNGLVDVVRN 218
           + +L++++L+    PPPH G  +A K+ +LL++WGI+KK+FTLT+++AS N+ +  +++ 
Sbjct: 121 DGVLKTKILSFCAFPPPHSGVAIAMKLSELLKDWGIEKKVFTLTVDNASANDTMQSILKR 180

Query: 217 HF--NLLREGEYFHIRCGAQILNSSAQIVLELIQNCVIKVRQSVKYVKGTKERLLIFTKC 44
               +L+  GE+FH+RC A ILN   Q  LE+I   + K+R++VKYVKG++ R  +F  C
Sbjct: 181 KLQKDLVCSGEFFHVRCSAHILNLIVQDGLEVISGALEKIRETVKYVKGSETRENLFQNC 240

Query: 43  VAQLSLKS 20
           +  + +++
Sbjct: 241 MDTIGIQT 248


>emb|CAN80126.1| hypothetical protein VITISV_013417 [Vitis vinifera]
          Length = 1266

 Score =  131 bits (329), Expect = 9e-29
 Identities = 61/190 (32%), Positives = 117/190 (61%), Gaps = 6/190 (3%)
 Frame = -3

Query: 562 ISQHIVKDDVLEIYRKGKERFTLALESVP--VSLTFDLWFSEKADGYLLLRANFVDENWI 389
           +S++ +KDD+++IY   K + +  LE +   +++T D+W S +  GY+ +  +++DE+W+
Sbjct: 233 VSRNTIKDDIMKIYEFEKGKMSSYLEKLETRMAITTDMWTSNQKKGYMAITVHYIDESWL 292

Query: 388 LQSRMLNLKFIPPPHEGPLLAEKVIDLLEEWGIKKKLFTLTLNDASTNNGLVDVVRNHF- 212
           L   ++   ++PPPH   +L++ ++D L +W + +KL T+T+++ S+N+G++D++     
Sbjct: 293 LHHHIVRFVYVPPPHTKEVLSDVLLDFLLDWNMDRKLSTITVDNCSSNDGMIDILSEKLS 352

Query: 211 ---NLLREGEYFHIRCGAQILNSSAQIVLELIQNCVIKVRQSVKYVKGTKERLLIFTKCV 41
              +LL  G+ FH+RC A +LN   +  L++I+  + K+R+SV Y   T  R+  F    
Sbjct: 353 SSGSLLLNGKIFHMRCAAHVLNLIVKEGLDVIRVEIEKIRESVAYWSATPSRVEKFEDAA 412

Query: 40  AQLSLKSNKK 11
            QL L  NKK
Sbjct: 413 RQLRLPCNKK 422


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