BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00034499
         (745 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16200.3| unnamed protein product [Vitis vinifera]              259   3e-67
ref|XP_002281461.2| PREDICTED: DNA repair protein RAD51 homolog ...   254   2e-65
emb|CAN80345.1| hypothetical protein VITISV_003133 [Vitis vinifera]   253   4e-65
ref|XP_002531104.1| DNA repair and recombination protein radB, p...   247   2e-63
ref|XP_004148219.1| PREDICTED: DNA repair protein RAD51 homolog ...   229   6e-58

>emb|CBI16200.3| unnamed protein product [Vitis vinifera]
          Length = 1093

 Score =  259 bits (663), Expect = 3e-67
 Identities = 136/228 (59%), Positives = 175/228 (76%), Gaps = 5/228 (2%)
 Frame = +3

Query: 9   ISTGYERIDMLLQGGLFPGNLVEVVGPSSSGKTQICLKXXXXXXXXXLGSVIFFDTGNSF 188
           +STG E IDMLL GGL  G+L E+VGPSS+GKTQICLK         +G V+F DTGNSF
Sbjct: 141 LSTGCEGIDMLLHGGLCVGHLTELVGPSSAGKTQICLKVASGVATRYMGGVVFIDTGNSF 200

Query: 189 SPKRIDKLLDQISDSAIIKTKE-VRQQVMNKIVCQSVFDIFVLIDLLHQLKSNLKPM--T 359
           SP RI   ++QI D+   + K+ + ++VM++I+C SVFDIF ++D++HQL+ +L+    T
Sbjct: 201 SPLRIAHFINQIPDTIFKEVKQNILEKVMSQILCHSVFDIFAMLDVVHQLEYSLRSQVQT 260

Query: 360 GCS-VQMLIVDSISSLVTPILG-SGAHGHALMVSVGFLLKELAYEHNLSVLVTNHMVGAE 533
           G   V++LIVDSISSL+TPILG SG+HG ALM+S GFLLK+LA+EHNL+V+VTNHMVG E
Sbjct: 261 GADQVRLLIVDSISSLITPILGGSGSHGRALMISAGFLLKKLAHEHNLAVVVTNHMVGGE 320

Query: 534 GGHLKPALGESWKNIPHMRLHLSRDRKSNICSMSILRHPYIAAGTAVS 677
           GG LKPALGESWK+IPH+RL LSRD  S+IC MSIL+H Y+    + S
Sbjct: 321 GGILKPALGESWKSIPHVRLLLSRDPGSSICHMSILKHSYMVCSLSFS 368


>ref|XP_002281461.2| PREDICTED: DNA repair protein RAD51 homolog 4-like [Vitis vinifera]
          Length = 326

 Score =  254 bits (648), Expect = 2e-65
 Identities = 136/220 (61%), Positives = 170/220 (77%), Gaps = 4/220 (1%)
 Frame = +3

Query: 9   ISTGYERIDMLLQGGLFPGNLVEVVGPSSSGKTQICLKXXXXXXXXXLGSVIFFDTGNSF 188
           +STG E IDMLL GGL  G+L E+VGPSS+GKTQICLK         +G V+F DTGNSF
Sbjct: 89  LSTGCEGIDMLLHGGLCVGHLTELVGPSSAGKTQICLKVASGVATRYMGGVVFIDTGNSF 148

Query: 189 SPKRIDKLLDQISDSAIIKTKEVRQQVMNKIVCQSVFDIFVLIDLLHQLKSNLKPM--TG 362
           SP RI   ++QI D+     KEV   +M++I+C SVFDIF ++D++HQL+ +L+    TG
Sbjct: 149 SPLRIAHFINQIPDTIF---KEV---IMSQILCHSVFDIFAMLDVVHQLEYSLRSQVQTG 202

Query: 363 CS-VQMLIVDSISSLVTPILG-SGAHGHALMVSVGFLLKELAYEHNLSVLVTNHMVGAEG 536
              V++LIVDSISSL+TPILG SG+HG ALM+S GFLLK+LA+EHNL+V+VTNHMVG EG
Sbjct: 203 ADQVRLLIVDSISSLITPILGGSGSHGRALMISAGFLLKKLAHEHNLAVVVTNHMVGGEG 262

Query: 537 GHLKPALGESWKNIPHMRLHLSRDRKSNICSMSILRHPYI 656
           G LKPALGESWK+IPH+RL LSRD  S+IC MSIL+H Y+
Sbjct: 263 GILKPALGESWKSIPHVRLLLSRDPGSSICHMSILKHSYM 302


>emb|CAN80345.1| hypothetical protein VITISV_003133 [Vitis vinifera]
          Length = 1051

 Score =  253 bits (645), Expect = 4e-65
 Identities = 139/250 (55%), Positives = 180/250 (72%), Gaps = 24/250 (9%)
 Frame = +3

Query: 9   ISTGYERIDMLLQGGLFPGNLVEVVGPSSSGKTQICLKXXXXXXXXXLGSVIFFDTGNSF 188
           +STG E IDMLLQGGL  G+L E+VGPSSSGKTQICLK         +G V+F DTGNSF
Sbjct: 89  LSTGCEGIDMLLQGGLCVGHLTELVGPSSSGKTQICLKVASGVATRYMGGVVFIDTGNSF 148

Query: 189 SPKRIDKLLDQISDSAIIKTKE-VRQQVMNKIVCQSVFDIFVLIDLLHQLKSNLKP--MT 359
           SP RI   ++QI D+   + K+ + ++VM++I+C SVFDIF ++D++HQL+ +L+    T
Sbjct: 149 SPLRIAHFINQIPDTIFKEVKQNILEKVMSQILCHSVFDIFAMLDVVHQLEYSLRSQVQT 208

Query: 360 GC-SVQMLIVDSISSLVTPIL-GSGAHGHALMVSVGFLLKELAYEHNLSVL--------- 506
           G   V++LIVDSISSL+TPIL GSG+HG ALM+S GFLLK+LA+EHNL+V+         
Sbjct: 209 GADQVRLLIVDSISSLITPILGGSGSHGRALMISAGFLLKKLAHEHNLAVVPIIKVSILT 268

Query: 507 ----------VTNHMVGAEGGHLKPALGESWKNIPHMRLHLSRDRKSNICSMSILRHPYI 656
                     VTNHMVG EGG LKPALGESWK+IPH+RL LSRD  S+IC MSIL+H Y+
Sbjct: 269 IITIMIHWLKVTNHMVGGEGGILKPALGESWKSIPHVRLLLSRDPGSSICHMSILKHSYM 328

Query: 657 AAGTAVSLSL 686
           +   A++ +L
Sbjct: 329 SRTKAINHTL 338


>ref|XP_002531104.1| DNA repair and recombination protein radB, putative [Ricinus
           communis] gi|223529300|gb|EEF31269.1| DNA repair and
           recombination protein radB, putative [Ricinus communis]
          Length = 315

 Score =  247 bits (630), Expect = 2e-63
 Identities = 129/232 (55%), Positives = 168/232 (72%), Gaps = 4/232 (1%)
 Frame = +3

Query: 3   HSISTGYERIDMLLQGGLFPGNLVEVVGPSSSGKTQICLKXXXXXXXXXLGSVIFFDTGN 182
           H +STG++ ID LL GG+  G L E+VG SSSGKTQ+CL+         +G VIF DTGN
Sbjct: 88  HVLSTGFDGIDSLLGGGVREGQLTELVGSSSSGKTQVCLQVAANVAKQHMGRVIFVDTGN 147

Query: 183 SFSPKRIDKLLDQISDSAIIKTKEVRQQVMNKIVCQSVFDIFVLIDLLHQLKSNLKPMTG 362
           SFSP+RI++ + +IS SA+       Q VM+ I+C SVFDIF + D+LHQL+ +L+    
Sbjct: 148 SFSPRRIEQFVGRISGSAL------NQTVMSNILCHSVFDIFSMFDVLHQLEISLRSQGH 201

Query: 363 CS---VQMLIVDSISSLVTPILGSG-AHGHALMVSVGFLLKELAYEHNLSVLVTNHMVGA 530
                VQ LIVDSISSL+TPILG G + GHALM S G LLK+LA+EHN++VLVTNHMV  
Sbjct: 202 SGDFKVQSLIVDSISSLITPILGGGGSQGHALMTSAGILLKKLAHEHNIAVLVTNHMVAG 261

Query: 531 EGGHLKPALGESWKNIPHMRLHLSRDRKSNICSMSILRHPYIAAGTAVSLSL 686
           EGG+ KPALGESWK+IPH+RL LSRD+  N+C+++IL+HP  A+G A   ++
Sbjct: 262 EGGNFKPALGESWKSIPHVRLLLSRDQGKNVCNVTILKHPSQASGKAARFTV 313


>ref|XP_004148219.1| PREDICTED: DNA repair protein RAD51 homolog 4-like [Cucumis
           sativus] gi|449518921|ref|XP_004166484.1| PREDICTED: DNA
           repair protein RAD51 homolog 4-like [Cucumis sativus]
          Length = 314

 Score =  229 bits (583), Expect = 6e-58
 Identities = 121/224 (54%), Positives = 155/224 (69%), Gaps = 5/224 (2%)
 Frame = +3

Query: 9   ISTGYERIDMLLQGGLFPGNLVEVVGPSSSGKTQICLKXXXXXXXXXLGSVIFFDTGNSF 188
           +S G+E +D+LL GGL  G L E+VGPSSSGKTQ+CL+            V + DTGNSF
Sbjct: 90  LSIGFEGVDVLLGGGLREGQLTEIVGPSSSGKTQVCLRAASNVAKNYKAEVFYMDTGNSF 149

Query: 189 SPKRIDKLLDQISDSAIIKTKEVRQQVMNKIVCQSVFDIFVLIDLLHQLKSNLKPMTGCS 368
           SP+RI   +     S +       Q+VM  I C SVF+IF L D+LHQL+ NL+  T C 
Sbjct: 150 SPQRISGFVCTSEQSML-------QRVMTSISCHSVFNIFALFDVLHQLEFNLRSQT-CK 201

Query: 369 ----VQMLIVDSISSLVTPILG-SGAHGHALMVSVGFLLKELAYEHNLSVLVTNHMVGAE 533
               VQ+LI+DSISSL+TPILG S + GHALM+S G LLK++A+EHN++VLVTNH VG +
Sbjct: 202 GDRRVQLLIIDSISSLITPILGGSSSQGHALMISAGTLLKKIAHEHNIAVLVTNHTVGGD 261

Query: 534 GGHLKPALGESWKNIPHMRLHLSRDRKSNICSMSILRHPYIAAG 665
            G  KPALGESWK++PH+RL LSRD  SN+C  SIL+H  +A+G
Sbjct: 262 RGTSKPALGESWKSVPHVRLQLSRDAGSNVCQASILKHSSMASG 305