BLASTX nr result

ID: Cnidium21_contig00034497 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Cnidium21_contig00034497
         (314 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273656.1| PREDICTED: DNA replication complex GINS prot...    62   4e-08
ref|XP_004137154.1| PREDICTED: DNA replication complex GINS prot...    62   6e-08
ref|XP_002315220.1| predicted protein [Populus trichocarpa] gi|2...    59   3e-07
gb|EEE54233.1| hypothetical protein OsJ_01101 [Oryza sativa Japo...    59   5e-07
ref|NP_001042585.1| Os01g0248600 [Oryza sativa Japonica Group] g...    59   5e-07

>ref|XP_002273656.1| PREDICTED: DNA replication complex GINS protein PSF2 [Vitis
           vinifera] gi|297737295|emb|CBI26496.3| unnamed protein
           product [Vitis vinifera]
          Length = 210

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 29/38 (76%), Positives = 30/38 (78%)
 Frame = -1

Query: 155 GIFWPFHPQIATEVPLWLAPVLKKSGKCTI*LPEWMSV 42
           G F PF PQIAT+VPLWLA  LKK GKCTI  PEWMSV
Sbjct: 42  GDFGPFRPQIATQVPLWLAVALKKRGKCTIRPPEWMSV 79


>ref|XP_004137154.1| PREDICTED: DNA replication complex GINS protein PSF2-like [Cucumis
           sativus] gi|449528599|ref|XP_004171291.1| PREDICTED: DNA
           replication complex GINS protein PSF2-like [Cucumis
           sativus]
          Length = 212

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 28/38 (73%), Positives = 30/38 (78%)
 Frame = -1

Query: 155 GIFWPFHPQIATEVPLWLAPVLKKSGKCTI*LPEWMSV 42
           G + PF+PQIATEVPLWLA  LKK GKC I  PEWMSV
Sbjct: 42  GDYGPFYPQIATEVPLWLAIALKKRGKCAIRTPEWMSV 79


>ref|XP_002315220.1| predicted protein [Populus trichocarpa] gi|222864260|gb|EEF01391.1|
           predicted protein [Populus trichocarpa]
          Length = 227

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 24/38 (63%), Positives = 31/38 (81%)
 Frame = -1

Query: 155 GIFWPFHPQIATEVPLWLAPVLKKSGKCTI*LPEWMSV 42
           G + PF+PQ+A +VP+WLA  LKK GKCTI LP+WMS+
Sbjct: 42  GDYGPFYPQLAAQVPIWLALALKKRGKCTIRLPQWMSI 79


>gb|EEE54233.1| hypothetical protein OsJ_01101 [Oryza sativa Japonica Group]
          Length = 224

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 26/38 (68%), Positives = 30/38 (78%)
 Frame = -1

Query: 155 GIFWPFHPQIATEVPLWLAPVLKKSGKCTI*LPEWMSV 42
           G F PF PQIA++VPLWLA  LKK GKCTI  P+WM+V
Sbjct: 42  GDFGPFFPQIASKVPLWLAVALKKRGKCTIRTPDWMTV 79


>ref|NP_001042585.1| Os01g0248600 [Oryza sativa Japonica Group]
           gi|11320850|dbj|BAB18333.1| putative DNA replication
           complex GINS protein PSF2 [Oryza sativa Japonica Group]
           gi|113532116|dbj|BAF04499.1| Os01g0248600 [Oryza sativa
           Japonica Group] gi|215686405|dbj|BAG87690.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|215704757|dbj|BAG94785.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 211

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 26/38 (68%), Positives = 30/38 (78%)
 Frame = -1

Query: 155 GIFWPFHPQIATEVPLWLAPVLKKSGKCTI*LPEWMSV 42
           G F PF PQIA++VPLWLA  LKK GKCTI  P+WM+V
Sbjct: 42  GDFGPFFPQIASKVPLWLAVALKKRGKCTIRTPDWMTV 79


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