BLASTX nr result
ID: Cnidium21_contig00034473
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Cnidium21_contig00034473
(310 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containi... 132 3e-29
emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera] 132 3e-29
ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containi... 131 5e-29
ref|XP_003588887.1| Pentatricopeptide repeat-containing protein ... 130 1e-28
ref|XP_004140282.1| PREDICTED: pentatricopeptide repeat-containi... 129 2e-28
>ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Vitis vinifera]
Length = 694
Score = 132 bits (332), Expect = 3e-29
Identities = 61/89 (68%), Positives = 73/89 (82%)
Frame = -2
Query: 309 KDLVSWTSMIMAYGSHGQACEALKLFKEMQKSKIKPDRVTFLAVISACSHAGLVDEGLYY 130
+D VSWTSMI AYGSHGQA EALKLF++MQ+S KPD+VTFLA++SACSHAGLVDEG YY
Sbjct: 473 RDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYY 532
Query: 129 YSTMINSYRIQPTIAEQSCLIDLLGRAGK 43
++ MI Y +P + SCLIDLLGR G+
Sbjct: 533 FNQMIAEYGFKPAVEHYSCLIDLLGRVGR 561
Score = 58.2 bits (139), Expect = 7e-07
Identities = 28/87 (32%), Positives = 51/87 (58%)
Frame = -2
Query: 306 DLVSWTSMIMAYGSHGQACEALKLFKEMQKSKIKPDRVTFLAVISACSHAGLVDEGLYYY 127
++VSW MI Y G EAL +F +M+K+ +KPD +TF +V+ ACS ++++G +
Sbjct: 373 NVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIH 432
Query: 126 STMINSYRIQPTIAEQSCLIDLLGRAG 46
+ +I S +++ L+D+ + G
Sbjct: 433 NFIIES-KLEINEVVMGALLDMYAKCG 458
Score = 55.8 bits (133), Expect = 3e-06
Identities = 30/89 (33%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Frame = -2
Query: 309 KDLVSWTSMIMAYGSHGQACEALKLFKEMQKSKIKPDRVTFLAVISACSHAGLVDEGLYY 130
+D+ SW ++I Y GQ +AL+LF+EM+ S KPD VT VIS+C+ ++ G
Sbjct: 170 RDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEI 229
Query: 129 YSTMINS-YRIQPTIAEQSCLIDLLGRAG 46
+ ++ S + + ++ S L+D+ G+ G
Sbjct: 230 HMELVRSGFALDGFVS--SALVDMYGKCG 256
>emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
Length = 886
Score = 132 bits (332), Expect = 3e-29
Identities = 61/89 (68%), Positives = 73/89 (82%)
Frame = -2
Query: 309 KDLVSWTSMIMAYGSHGQACEALKLFKEMQKSKIKPDRVTFLAVISACSHAGLVDEGLYY 130
+D VSWTSMI AYGSHGQA EALKLF++MQ+S KPD+VTFLA++SACSHAGLVDEG YY
Sbjct: 665 RDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYY 724
Query: 129 YSTMINSYRIQPTIAEQSCLIDLLGRAGK 43
++ MI Y +P + SCLIDLLGR G+
Sbjct: 725 FNQMIAEYGFKPAVEHYSCLIDLLGRVGR 753
Score = 58.2 bits (139), Expect = 7e-07
Identities = 28/87 (32%), Positives = 51/87 (58%)
Frame = -2
Query: 306 DLVSWTSMIMAYGSHGQACEALKLFKEMQKSKIKPDRVTFLAVISACSHAGLVDEGLYYY 127
++VSW MI Y G EAL +F +M+K+ +KPD +TF +V+ ACS ++++G +
Sbjct: 565 NVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIH 624
Query: 126 STMINSYRIQPTIAEQSCLIDLLGRAG 46
+ +I S +++ L+D+ + G
Sbjct: 625 NFIIES-KLEINEVVMGALLDMYAKCG 650
Score = 55.8 bits (133), Expect = 3e-06
Identities = 30/89 (33%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Frame = -2
Query: 309 KDLVSWTSMIMAYGSHGQACEALKLFKEMQKSKIKPDRVTFLAVISACSHAGLVDEGLYY 130
+D+ SW ++I Y GQ +AL+LF+EM+ S KPD VT VIS+C+ ++ G
Sbjct: 362 RDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEI 421
Query: 129 YSTMINS-YRIQPTIAEQSCLIDLLGRAG 46
+ ++ S + + ++ S L+D+ G+ G
Sbjct: 422 HMELVRSGFALDGFVS--SALVDMYGKCG 448
>ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Glycine max]
Length = 705
Score = 131 bits (330), Expect = 5e-29
Identities = 62/89 (69%), Positives = 73/89 (82%)
Frame = -2
Query: 309 KDLVSWTSMIMAYGSHGQACEALKLFKEMQKSKIKPDRVTFLAVISACSHAGLVDEGLYY 130
+DLVSWTSMI AYGSHGQA AL+LF EM +S +KPDRVTFLA++SAC HAGLVDEG YY
Sbjct: 473 RDLVSWTSMITAYGSHGQAYVALELFAEMLQSNMKPDRVTFLAILSACGHAGLVDEGCYY 532
Query: 129 YSTMINSYRIQPTIAEQSCLIDLLGRAGK 43
++ M+N Y I P + SCLIDLLGRAG+
Sbjct: 533 FNQMVNVYGIIPRVEHYSCLIDLLGRAGR 561
Score = 59.7 bits (143), Expect = 2e-07
Identities = 29/86 (33%), Positives = 50/86 (58%)
Frame = -2
Query: 303 LVSWTSMIMAYGSHGQACEALKLFKEMQKSKIKPDRVTFLAVISACSHAGLVDEGLYYYS 124
+VSW MI Y + G+ EAL LF EM+KS ++PD +TF +V++ACS +++G ++
Sbjct: 374 VVSWNVMISGYVAEGKLFEALGLFSEMRKSYVEPDAITFTSVLTACSQLAALEKGEEIHN 433
Query: 123 TMINSYRIQPTIAEQSCLIDLLGRAG 46
+I ++ L+D+ + G
Sbjct: 434 LIIEK-KLDNNEVVMGALLDMYAKCG 458
Score = 57.8 bits (138), Expect = 9e-07
Identities = 31/89 (34%), Positives = 47/89 (52%)
Frame = -2
Query: 309 KDLVSWTSMIMAYGSHGQACEALKLFKEMQKSKIKPDRVTFLAVISACSHAGLVDEGLYY 130
K +V+W SMI YG G + ++LFK M +KP T ++I CS + + EG +
Sbjct: 271 KTVVAWNSMISGYGLKGDSISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFV 330
Query: 129 YSTMINSYRIQPTIAEQSCLIDLLGRAGK 43
+ I + RIQ + S L+DL + GK
Sbjct: 331 HGYTIRN-RIQSDVFINSSLMDLYFKCGK 358
>ref|XP_003588887.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355477935|gb|AES59138.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 697
Score = 130 bits (327), Expect = 1e-28
Identities = 62/89 (69%), Positives = 74/89 (83%)
Frame = -2
Query: 309 KDLVSWTSMIMAYGSHGQACEALKLFKEMQKSKIKPDRVTFLAVISACSHAGLVDEGLYY 130
+DLVSWTSMI AYGSHG+ EAL+LF EM +S +KPDRVTFLA++SACSHAGLVD+GLY+
Sbjct: 473 RDLVSWTSMITAYGSHGRVYEALELFAEMLQSNVKPDRVTFLAILSACSHAGLVDDGLYH 532
Query: 129 YSTMINSYRIQPTIAEQSCLIDLLGRAGK 43
++ MIN Y I P I SCLI LLGRAG+
Sbjct: 533 FNQMINVYGIIPRIEHYSCLITLLGRAGR 561
Score = 62.0 bits (149), Expect = 5e-08
Identities = 33/89 (37%), Positives = 48/89 (53%)
Frame = -2
Query: 309 KDLVSWTSMIMAYGSHGQACEALKLFKEMQKSKIKPDRVTFLAVISACSHAGLVDEGLYY 130
K +V+W SMI YG G ++LFK M +KP T + + ACS + + EG +
Sbjct: 271 KTVVAWNSMINGYGFKGDGISCIQLFKRMYSEGVKPTLTTLTSTLMACSQSAQLLEGKFV 330
Query: 129 YSTMINSYRIQPTIAEQSCLIDLLGRAGK 43
+ +I + RIQP I S L+DL + GK
Sbjct: 331 HGYIIRN-RIQPDIFLNSSLMDLYFKCGK 358
Score = 56.2 bits (134), Expect = 3e-06
Identities = 27/85 (31%), Positives = 48/85 (56%)
Frame = -2
Query: 300 VSWTSMIMAYGSHGQACEALKLFKEMQKSKIKPDRVTFLAVISACSHAGLVDEGLYYYST 121
VSW MI Y + G+ +AL+LF EM KS ++PD +TF +V++ACS +++G ++
Sbjct: 375 VSWNVMISGYVTEGKLFDALRLFGEMSKSFVEPDAITFTSVLAACSQLAALEKGREIHNL 434
Query: 120 MINSYRIQPTIAEQSCLIDLLGRAG 46
++ + L+D+ + G
Sbjct: 435 IVER-NLGNNEVVMGALLDMYAKCG 458
>ref|XP_004140282.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g27110-like [Cucumis sativus]
gi|449481162|ref|XP_004156100.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g27110-like [Cucumis sativus]
Length = 693
Score = 129 bits (324), Expect = 2e-28
Identities = 62/89 (69%), Positives = 72/89 (80%)
Frame = -2
Query: 309 KDLVSWTSMIMAYGSHGQACEALKLFKEMQKSKIKPDRVTFLAVISACSHAGLVDEGLYY 130
+DLVSWTSMI AYGSHGQA EAL+LF EMQK ++ D VTFLAV+SACSHAGLVDEG Y
Sbjct: 473 RDLVSWTSMIFAYGSHGQASEALRLFDEMQKLNVRADSVTFLAVLSACSHAGLVDEGYMY 532
Query: 129 YSTMINSYRIQPTIAEQSCLIDLLGRAGK 43
++ M+ Y I+P I SCLIDLLGRAG+
Sbjct: 533 FNEMVVQYDIKPGIEHYSCLIDLLGRAGR 561